RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 FGD6Q6ZV73 1430 aa9.8□□□□□ -0.84
FN1-213ENST00000456923 PPP6R1Q9UPN7 881 aa9.8□□□□□ -0.84
FN1-213ENST00000456923 NEURL4Q96JN8 1562 aa9.8□□□□□ -0.84
FN1-213ENST00000456923 TRAPPC8Q9Y2L5 1435 aa9.8□□□□□ -0.84
FN1-213ENST00000456923 ROCK1Q13464 1354 aa9.79□□□□□ -0.84
FN1-213ENST00000456923 NPATQ14207 1427 aa9.79□□□□□ -0.84
FN1-213ENST00000456923 MTUS2Q5JR59 1369 aa9.79□□□□□ -0.84
FN1-213ENST00000456923 CCNB3Q8WWL7 1395 aa9.79□□□□□ -0.84
FN1-213ENST00000456923 DIEXFQ68CQ4 756 aaKnown RBP9.79□□□□□ -0.84
FN1-213ENST00000456923 IQGAP3Q86VI3 1631 aa9.79□□□□□ -0.84
FN1-213ENST00000456923 RIMS1Q86UR5 1692 aaKnown RBP9.78□□□□□ -0.84
FN1-213ENST00000456923 CAMSAP1Q5T5Y3 1602 aa9.78□□□□□ -0.84
FN1-213ENST00000456923 KLHL34Q8N239 644 aa9.77□□□□□ -0.85
FN1-213ENST00000456923 SPATA31D1Q6ZQQ2 1576 aa9.77□□□□□ -0.85
FN1-213ENST00000456923 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.85
FN1-213ENST00000456923 A2MP01023 1474 aa9.76□□□□□ -0.85
FN1-213ENST00000456923 P3H3Q8IVL6 736 aa9.76□□□□□ -0.85
FN1-213ENST00000456923 TET3O43151 1660 aa9.76□□□□□ -0.85
FN1-213ENST00000456923 TRHP20396 242 aaPredicted RBP9.76□□□□□ -0.85
FN1-213ENST00000456923 TSHZ2Q9NRE2 1034 aa9.76□□□□□ -0.85
FN1-213ENST00000456923 PIK3C2BO00750 1634 aa9.76□□□□□ -0.85
FN1-213ENST00000456923 DEKP35659 375 aaKnown RBP9.76□□□□□ -0.85
FN1-213ENST00000456923 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
FN1-213ENST00000456923 DAPK1P53355 1430 aa9.75□□□□□ -0.85
FN1-213ENST00000456923 YEATS2Q9ULM3 1422 aa9.75□□□□□ -0.85
FN1-213ENST00000456923 MYO3AQ8NEV4 1616 aa9.75□□□□□ -0.85
FN1-213ENST00000456923 CLTCQ00610 1675 aaKnown RBP9.74□□□□□ -0.85
FN1-213ENST00000456923 PDE4CQ08493 712 aa9.74□□□□□ -0.85
FN1-213ENST00000456923 ABCC5O15440 1437 aa9.74□□□□□ -0.85
FN1-213ENST00000456923 DHX29Q7Z478 1369 aaKnown RBP9.73□□□□□ -0.85
FN1-213ENST00000456923 RPRD2Q5VT52 1461 aaKnown RBP9.73□□□□□ -0.85
FN1-213ENST00000456923 NBR1Q14596 966 aa9.72□□□□□ -0.85
FN1-213ENST00000456923 PTPRMP28827 1452 aa9.72□□□□□ -0.85
FN1-213ENST00000456923 MYT1LQ9UL68 1186 aa9.72□□□□□ -0.85
FN1-213ENST00000456923 ABCC3O15438 1527 aa9.72□□□□□ -0.85
FN1-213ENST00000456923 PZPP20742 1482 aa9.71□□□□□ -0.86
FN1-213ENST00000456923 POLR1AO95602 1720 aaPredicted RBP9.7□□□□□ -0.86
FN1-213ENST00000456923 EFCAB6Q5THR3 1501 aa9.7□□□□□ -0.86
FN1-213ENST00000456923 CEP152O94986 1710 aa9.7□□□□□ -0.86
FN1-213ENST00000456923 VSIG10Q8N0Z9 540 aa9.7□□□□□ -0.86
FN1-213ENST00000456923 SETD1BQ9UPS6 1966 aaKnown RBP9.7□□□□□ -0.86
FN1-213ENST00000456923 PLA2R1Q13018 1463 aa9.69□□□□□ -0.86
FN1-213ENST00000456923 BCL11BQ9C0K0 894 aaPredicted RBP9.69□□□□□ -0.86
FN1-213ENST00000456923 NCOA1Q15788 1441 aa9.67□□□□□ -0.86
FN1-213ENST00000456923 NEFLP07196 543 aa9.66□□□□□ -0.86
FN1-213ENST00000456923 STRCQ7RTU9 1775 aa9.66□□□□□ -0.86
FN1-213ENST00000456923 UBR1Q8IWV7 1749 aa9.66□□□□□ -0.86
FN1-213ENST00000456923 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
FN1-213ENST00000456923 LMTK3Q96Q04 1460 aa9.66□□□□□ -0.86
FN1-213ENST00000456923 PTPRKQ15262 1439 aa9.65□□□□□ -0.86
FN1-213ENST00000456923 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.86
FN1-213ENST00000456923 IQSEC2Q5JU85 1478 aa9.65□□□□□ -0.86
FN1-213ENST00000456923 UGGT1Q9NYU2 1555 aa9.65□□□□□ -0.86
FN1-213ENST00000456923 KCNH8Q96L42 1107 aa9.65□□□□□ -0.87
FN1-213ENST00000456923 NLRP1Q9C000 1473 aa9.65□□□□□ -0.87
FN1-213ENST00000456923 PDIA4P13667 645 aaKnown RBP9.64□□□□□ -0.87
FN1-213ENST00000456923 E9PCH4 1651 aa9.64□□□□□ -0.87
FN1-213ENST00000456923 SPHKAPQ2M3C7 1700 aa9.64□□□□□ -0.87
FN1-213ENST00000456923 LOC105371045A0A1W2PR82 267 aa9.64□□□□□ -0.87
FN1-213ENST00000456923 KANK4Q5T7N3 995 aaPredicted RBP9.64□□□□□ -0.87
FN1-213ENST00000456923 CFDP1Q9UEE9 299 aaPredicted RBP9.64□□□□□ -0.87
FN1-213ENST00000456923 SLIT1O75093 1534 aa9.63□□□□□ -0.87
FN1-213ENST00000456923 CEP170BQ9Y4F5 1589 aaPredicted RBP9.63□□□□□ -0.87
FN1-213ENST00000456923 IFT172Q9UG01 1749 aa9.63□□□□□ -0.87
FN1-213ENST00000456923 MED14O60244 1454 aa9.62□□□□□ -0.87
FN1-213ENST00000456923 HFM1A2PYH4 1435 aa9.62□□□□□ -0.87
FN1-213ENST00000456923 SYNMO15061 1565 aa9.61□□□□□ -0.87
FN1-213ENST00000456923 SPAG9O60271 1321 aaKnown RBP9.61□□□□□ -0.87
FN1-213ENST00000456923 NOS1P29475 1434 aa9.61□□□□□ -0.87
FN1-213ENST00000456923 ARHGAP23Q9P227 1491 aa9.61□□□□□ -0.87
FN1-213ENST00000456923 A2ML1A8K2U0 1454 aa9.61□□□□□ -0.87
FN1-213ENST00000456923 PRAG1Q86YV5 1406 aa9.6□□□□□ -0.87
FN1-213ENST00000456923 ERVK-7P63135 1459 aa9.6□□□□□ -0.87
FN1-213ENST00000456923 ANKRD30AQ9BXX3 1397 aa9.6□□□□□ -0.87
FN1-213ENST00000456923 EHMT2Q96KQ7 1210 aa9.6□□□□□ -0.87
FN1-213ENST00000456923 DIP2AQ14689 1571 aa9.59□□□□□ -0.87
FN1-213ENST00000456923 RAPGEF3O95398 923 aa9.59□□□□□ -0.87
FN1-213ENST00000456923 TRIM26Q12899 539 aaPredicted RBP9.59□□□□□ -0.87
FN1-213ENST00000456923 PTPRTO14522 1441 aa9.59□□□□□ -0.87
FN1-213ENST00000456923 ADGRB3O60242 1522 aa9.59□□□□□ -0.87
FN1-213ENST00000456923 TRPM2O94759 1503 aa9.59□□□□□ -0.87
FN1-213ENST00000456923 NWD1Q149M9 1564 aa9.58□□□□□ -0.88
FN1-213ENST00000456923 TMEM131LA2VDJ0 1609 aa9.58□□□□□ -0.88
FN1-213ENST00000456923 ITGAEP38570 1179 aa9.57□□□□□ -0.88
FN1-213ENST00000456923 PLPPR3Q6T4P5 718 aa9.57□□□□□ -0.88
FN1-213ENST00000456923 CCER1Q8TC90 406 aaPredicted RBP9.56□□□□□ -0.88
FN1-213ENST00000456923 SETD1AO15047 1707 aaKnown RBP9.56□□□□□ -0.88
FN1-213ENST00000456923 KIF15Q9NS87 1388 aa9.56□□□□□ -0.88
FN1-213ENST00000456923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.56□□□□□ -0.88
FN1-213ENST00000456923 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
FN1-213ENST00000456923 SUPT16HQ9Y5B9 1047 aaKnown RBP9.56□□□□□ -0.88
FN1-213ENST00000456923 ZMYND15Q9H091 742 aa9.55□□□□□ -0.88
FN1-213ENST00000456923 NAIPQ13075 1403 aa9.55□□□□□ -0.88
FN1-213ENST00000456923 GLIPR1L2Q4G1C9 344 aa9.54□□□□□ -0.88
FN1-213ENST00000456923 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
FN1-213ENST00000456923 AFAP1Q8N556 730 aa9.54□□□□□ -0.88
FN1-213ENST00000456923 PAXIP1Q6ZW49 1069 aaPredicted RBP9.54□□□□□ -0.88
FN1-213ENST00000456923 HAP1P54257 671 aaPredicted RBP9.53□□□□□ -0.88
FN1-213ENST00000456923 IQGAP1P46940 1657 aa9.53□□□□□ -0.88
FN1-213ENST00000456923 ANKRD50Q9ULJ7 1429 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms