RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 NUP153P49790 1475 aaKnown RBP18.03■□□□□ 0.48
PTPRE-204ENST00000455661 NFKBIBQ15653 356 aa18.03■□□□□ 0.48
PTPRE-204ENST00000455661 CRBNQ96SW2 442 aa18.03■□□□□ 0.48
PTPRE-204ENST00000455661 PLIN1O60240 522 aa18.03■□□□□ 0.48
PTPRE-204ENST00000455661 ADAMTS12P58397 1594 aa18.02■□□□□ 0.48
PTPRE-204ENST00000455661 ANKRD50Q9ULJ7 1429 aa18.02■□□□□ 0.48
PTPRE-204ENST00000455661 INSRP06213 1382 aa18.02■□□□□ 0.47
PTPRE-204ENST00000455661 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
PTPRE-204ENST00000455661 RAPGEF6Q8TEU7 1601 aa18.01■□□□□ 0.47
PTPRE-204ENST00000455661 NUP155O75694 1391 aa18.01■□□□□ 0.47
PTPRE-204ENST00000455661 DCAF11Q8TEB1 546 aa18■□□□□ 0.47
PTPRE-204ENST00000455661 TROQ12816 1431 aaPredicted RBP18■□□□□ 0.47
PTPRE-204ENST00000455661 CROCC2H7BZ55 1655 aa18■□□□□ 0.47
PTPRE-204ENST00000455661 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.99■□□□□ 0.47
PTPRE-204ENST00000455661 BRPF3Q9ULD4 1205 aa17.99■□□□□ 0.47
PTPRE-204ENST00000455661 ZMYM4Q5VZL5 1548 aa17.98■□□□□ 0.47
PTPRE-204ENST00000455661 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
PTPRE-204ENST00000455661 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
PTPRE-204ENST00000455661 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
PTPRE-204ENST00000455661 PLEKHH2Q8IVE3 1493 aa17.97■□□□□ 0.47
PTPRE-204ENST00000455661 PRG4Q92954 1404 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-204ENST00000455661 BLMP54132 1417 aaPredicted RBP17.96■□□□□ 0.47
PTPRE-204ENST00000455661 CENPQQ7L2Z9 268 aaPredicted RBP17.96■□□□□ 0.47
PTPRE-204ENST00000455661 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
PTPRE-204ENST00000455661 FRAT1Q92837 279 aaPredicted RBP17.95■□□□□ 0.46
PTPRE-204ENST00000455661 DISP1Q96F81 1524 aa17.95■□□□□ 0.46
PTPRE-204ENST00000455661 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
PTPRE-204ENST00000455661 PER1O15534 1290 aaPredicted RBP17.94■□□□□ 0.46
PTPRE-204ENST00000455661 SLC4A3P48751 1232 aa17.94■□□□□ 0.46
PTPRE-204ENST00000455661 KDM2BQ8NHM5 1336 aa17.93■□□□□ 0.46
PTPRE-204ENST00000455661 CEP170Q5SW79 1584 aa17.93■□□□□ 0.46
PTPRE-204ENST00000455661 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
PTPRE-204ENST00000455661 KDM5DQ9BY66 1539 aa17.91■□□□□ 0.46
PTPRE-204ENST00000455661 ADCY10Q96PN6 1610 aa17.9■□□□□ 0.46
PTPRE-204ENST00000455661 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.46
PTPRE-204ENST00000455661 C20orf194Q5TEA3 1177 aa17.89■□□□□ 0.45
PTPRE-204ENST00000455661 SHANK2Q9UPX8 1470 aa17.89■□□□□ 0.45
PTPRE-204ENST00000455661 C9orf84Q5VXU9 1444 aa17.88■□□□□ 0.45
PTPRE-204ENST00000455661 TSPY4P0CV99 314 aa17.88■□□□□ 0.45
PTPRE-204ENST00000455661 TSPY10P0CW01 314 aa17.88■□□□□ 0.45
PTPRE-204ENST00000455661 C8orf34Q49A92 452 aa17.87■□□□□ 0.45
PTPRE-204ENST00000455661 TRPM1Q7Z4N2 1603 aa17.86■□□□□ 0.45
PTPRE-204ENST00000455661 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
PTPRE-204ENST00000455661 PANK3Q9H999 370 aa17.86■□□□□ 0.45
PTPRE-204ENST00000455661 COL17A1Q9UMD9 1497 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-204ENST00000455661 PTPRGP23470 1445 aa17.85■□□□□ 0.45
PTPRE-204ENST00000455661 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
PTPRE-204ENST00000455661 FRAT2O75474 233 aaPredicted RBP17.83■□□□□ 0.45
PTPRE-204ENST00000455661 EIF5BO60841 1220 aaKnown RBP17.82■□□□□ 0.44
PTPRE-204ENST00000455661 UBE2Q2Q8WVN8 375 aa17.82■□□□□ 0.44
PTPRE-204ENST00000455661 ADAMTS8Q9UP79 889 aa17.82■□□□□ 0.44
PTPRE-204ENST00000455661 GPRASP1Q5JY77 1395 aa17.82■□□□□ 0.44
PTPRE-204ENST00000455661 TMF1P82094 1093 aa17.81■□□□□ 0.44
PTPRE-204ENST00000455661 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
PTPRE-204ENST00000455661 NBPF1Q3BBV0 1214 aa17.81■□□□□ 0.44
PTPRE-204ENST00000455661 DUSP27Q5VZP5 1158 aa17.81■□□□□ 0.44
PTPRE-204ENST00000455661 FAM43AQ8N2R8 423 aa17.81■□□□□ 0.44
PTPRE-204ENST00000455661 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
PTPRE-204ENST00000455661 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
PTPRE-204ENST00000455661 DISP3Q9P2K9 1392 aa17.8■□□□□ 0.44
PTPRE-204ENST00000455661 RGS3P49796 1198 aa17.8■□□□□ 0.44
PTPRE-204ENST00000455661 GOLGA2Q08379 1002 aa17.8■□□□□ 0.44
PTPRE-204ENST00000455661 RSPH6AQ9H0K4 717 aa17.8■□□□□ 0.44
PTPRE-204ENST00000455661 PLB1Q6P1J6 1458 aa17.8■□□□□ 0.44
PTPRE-204ENST00000455661 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
PTPRE-204ENST00000455661 LAMC1P11047 1609 aa17.79■□□□□ 0.44
PTPRE-204ENST00000455661 ERBINQ96RT1 1412 aa17.79■□□□□ 0.44
PTPRE-204ENST00000455661 TESK2Q96S53 571 aa17.79■□□□□ 0.44
PTPRE-204ENST00000455661 PLEKHD1A6NEE1 506 aa17.78■□□□□ 0.44
PTPRE-204ENST00000455661 RGL3Q3MIN7 710 aa17.78■□□□□ 0.44
PTPRE-204ENST00000455661 PRDM15P57071 1507 aaPredicted RBP17.77■□□□□ 0.44
PTPRE-204ENST00000455661 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.43
PTPRE-204ENST00000455661 EIF3AQ14152 1382 aaKnown RBP17.76■□□□□ 0.43
PTPRE-204ENST00000455661 PLEKHH1Q9ULM0 1364 aa17.76■□□□□ 0.43
PTPRE-204ENST00000455661 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
PTPRE-204ENST00000455661 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
PTPRE-204ENST00000455661 KNSTRNQ9Y448 316 aa17.73■□□□□ 0.43
PTPRE-204ENST00000455661 EIF2AK4Q9P2K8 1649 aaKnown RBP17.73■□□□□ 0.43
PTPRE-204ENST00000455661 ABCC10Q5T3U5 1492 aa17.72■□□□□ 0.43
PTPRE-204ENST00000455661 PPP2R1AP30153 589 aa17.72■□□□□ 0.43
PTPRE-204ENST00000455661 HNRNPMP52272 730 aaKnown RBP eCLIP17.72■□□□□ 0.43
PTPRE-204ENST00000455661 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
PTPRE-204ENST00000455661 BECN1Q14457 450 aa17.72■□□□□ 0.43
PTPRE-204ENST00000455661 A2MP01023 1474 aa17.72■□□□□ 0.43
PTPRE-204ENST00000455661 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
PTPRE-204ENST00000455661 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
PTPRE-204ENST00000455661 ARHGEF5Q12774 1597 aa17.71■□□□□ 0.43
PTPRE-204ENST00000455661 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
PTPRE-204ENST00000455661 MAGI1Q96QZ7 1491 aaPredicted RBP17.71■□□□□ 0.42
PTPRE-204ENST00000455661 CLASP1Q7Z460 1538 aa17.7■□□□□ 0.42
PTPRE-204ENST00000455661 NUP160Q12769 1436 aa17.69■□□□□ 0.42
PTPRE-204ENST00000455661 L1TD1Q5T7N2 865 aaKnown RBP17.69■□□□□ 0.42
PTPRE-204ENST00000455661 RSPH4AQ5TD94 716 aa17.67■□□□□ 0.42
PTPRE-204ENST00000455661 TRMT2AQ8IZ69 625 aaKnown RBP17.67■□□□□ 0.42
PTPRE-204ENST00000455661 MAPK8IP3Q9UPT6 1336 aa17.67■□□□□ 0.42
PTPRE-204ENST00000455661 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
PTPRE-204ENST00000455661 CCDC141Q6ZP82 1450 aa17.66■□□□□ 0.42
PTPRE-204ENST00000455661 VIRMAQ69YN4 1812 aaKnown RBP17.66■□□□□ 0.42
PTPRE-204ENST00000455661 CDCA8Q53HL2 280 aa17.65■□□□□ 0.42
PTPRE-204ENST00000455661 SYNJ2O15056 1496 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms