RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 HECW1Q76N89 1606 aa7.63□□□□□ -1.19
GTF3C3-208ENST00000455546 MYO5CQ9NQX4 1742 aa7.62□□□□□ -1.19
GTF3C3-208ENST00000455546 CEBPAP49715 358 aaPredicted RBP7.62□□□□□ -1.19
GTF3C3-208ENST00000455546 PIP4P2Q8N4L2 257 aa7.62□□□□□ -1.19
GTF3C3-208ENST00000455546 CFAP74Q9C0B2 1584 aa7.62□□□□□ -1.19
GTF3C3-208ENST00000455546 STK25O00506 426 aa7.61□□□□□ -1.19
GTF3C3-208ENST00000455546 SPRYD3Q8NCJ5 442 aa7.61□□□□□ -1.19
GTF3C3-208ENST00000455546 ZFYVE16Q7Z3T8 1539 aa7.61□□□□□ -1.19
GTF3C3-208ENST00000455546 CDC42BPBQ9Y5S2 1711 aa7.61□□□□□ -1.19
GTF3C3-208ENST00000455546 TROQ12816 1431 aaPredicted RBP7.61□□□□□ -1.19
GTF3C3-208ENST00000455546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.6□□□□□ -1.19
GTF3C3-208ENST00000455546 ZFP91Q96JP5 570 aaPredicted RBP7.6□□□□□ -1.19
GTF3C3-208ENST00000455546 ZNF777Q9ULD5 760 aaPredicted RBP7.6□□□□□ -1.19
GTF3C3-208ENST00000455546 ARHGEF40Q8TER5 1519 aa7.6□□□□□ -1.19
GTF3C3-208ENST00000455546 ARHGAP5Q13017 1502 aa7.59□□□□□ -1.19
GTF3C3-208ENST00000455546 VGFO15240 615 aaPredicted RBP7.59□□□□□ -1.19
GTF3C3-208ENST00000455546 CHRM1P11229 460 aaPredicted RBP7.59□□□□□ -1.19
GTF3C3-208ENST00000455546 ATP10AO60312 1499 aa7.59□□□□□ -1.19
GTF3C3-208ENST00000455546 POGZQ7Z3K3 1410 aa7.59□□□□□ -1.19
GTF3C3-208ENST00000455546 ZMYM4Q5VZL5 1548 aa7.58□□□□□ -1.2
GTF3C3-208ENST00000455546 TSHZ2Q9NRE2 1034 aa7.58□□□□□ -1.2
GTF3C3-208ENST00000455546 STK24Q9Y6E0 443 aa7.58□□□□□ -1.2
GTF3C3-208ENST00000455546 CLIP1P30622 1438 aa7.58□□□□□ -1.2
GTF3C3-208ENST00000455546 CASKIN1Q8WXD9 1431 aa7.58□□□□□ -1.2
GTF3C3-208ENST00000455546 PCF11O94913 1555 aaKnown RBP7.58□□□□□ -1.2
GTF3C3-208ENST00000455546 MAGI2Q86UL8 1455 aa7.57□□□□□ -1.2
GTF3C3-208ENST00000455546 LMTK3Q96Q04 1460 aa7.57□□□□□ -1.2
GTF3C3-208ENST00000455546 FER1L4A9Z1Z3 1794 aa7.57□□□□□ -1.2
GTF3C3-208ENST00000455546 HNRNPMP52272 730 aaKnown RBP eCLIP7.57□□□□□ -1.2
GTF3C3-208ENST00000455546 NKX1-1Q15270 411 aaPredicted RBP7.57□□□□□ -1.2
GTF3C3-208ENST00000455546 BCL11BQ9C0K0 894 aaPredicted RBP7.57□□□□□ -1.2
GTF3C3-208ENST00000455546 TRAPPC8Q9Y2L5 1435 aa7.57□□□□□ -1.2
GTF3C3-208ENST00000455546 ARHGEF12Q9NZN5 1544 aa7.57□□□□□ -1.2
GTF3C3-208ENST00000455546 CDC42BPAQ5VT25 1732 aa7.56□□□□□ -1.2
GTF3C3-208ENST00000455546 TAOK2Q9UL54 1235 aa7.56□□□□□ -1.2
GTF3C3-208ENST00000455546 PCDHB8Q9UN66 801 aa7.56□□□□□ -1.2
GTF3C3-208ENST00000455546 PCDHB13Q9Y5F0 798 aa7.56□□□□□ -1.2
GTF3C3-208ENST00000455546 SETD1BQ9UPS6 1966 aaKnown RBP7.56□□□□□ -1.2
GTF3C3-208ENST00000455546 C9orf84Q5VXU9 1444 aa7.55□□□□□ -1.2
GTF3C3-208ENST00000455546 LOC105371045A0A1W2PR82 267 aa7.55□□□□□ -1.2
GTF3C3-208ENST00000455546 KDM2AQ9Y2K7 1162 aa7.55□□□□□ -1.2
GTF3C3-208ENST00000455546 CCDC61Q9Y6R9 512 aa7.55□□□□□ -1.2
GTF3C3-208ENST00000455546 ZNF518AQ6AHZ1 1483 aa7.55□□□□□ -1.2
GTF3C3-208ENST00000455546 PREX2Q70Z35 1606 aa7.54□□□□□ -1.2
GTF3C3-208ENST00000455546 FBXO41Q8TF61 875 aa7.54□□□□□ -1.2
GTF3C3-208ENST00000455546 CCDC18Q5T9S5 1454 aa7.54□□□□□ -1.2
GTF3C3-208ENST00000455546 VSIG10Q8N0Z9 540 aa7.53□□□□□ -1.2
GTF3C3-208ENST00000455546 CFDP1Q9UEE9 299 aaPredicted RBP7.53□□□□□ -1.2
GTF3C3-208ENST00000455546 KDM5CP41229 1560 aa7.53□□□□□ -1.2
GTF3C3-208ENST00000455546 ITSN2Q9NZM3 1697 aa7.53□□□□□ -1.2
GTF3C3-208ENST00000455546 KIDINS220Q9ULH0 1771 aa7.53□□□□□ -1.2
GTF3C3-208ENST00000455546 ZNF644Q9H582 1327 aaPredicted RBP7.52□□□□□ -1.2
GTF3C3-208ENST00000455546 GPATCH8Q9UKJ3 1502 aaKnown RBP7.52□□□□□ -1.2
GTF3C3-208ENST00000455546 ABCA6Q8N139 1617 aa7.52□□□□□ -1.2
GTF3C3-208ENST00000455546 DIP2CQ9Y2E4 1556 aa7.52□□□□□ -1.21
GTF3C3-208ENST00000455546 FYCO1Q9BQS8 1478 aa7.52□□□□□ -1.21
GTF3C3-208ENST00000455546 PAK3O75914 559 aaPredicted RBP7.52□□□□□ -1.21
GTF3C3-208ENST00000455546 ESF1Q9H501 851 aaKnown RBP7.52□□□□□ -1.21
GTF3C3-208ENST00000455546 ABCC1P33527 1531 aa7.52□□□□□ -1.21
GTF3C3-208ENST00000455546 MLH3Q9UHC1 1453 aa7.51□□□□□ -1.21
GTF3C3-208ENST00000455546 ZNF467Q7Z7K2 595 aaPredicted RBP7.51□□□□□ -1.21
GTF3C3-208ENST00000455546 SUPT6HQ7KZ85 1726 aaKnown RBP7.51□□□□□ -1.21
GTF3C3-208ENST00000455546 SPAG9O60271 1321 aaKnown RBP7.51□□□□□ -1.21
GTF3C3-208ENST00000455546 SAMD9LQ8IVG5 1584 aa7.5□□□□□ -1.21
GTF3C3-208ENST00000455546 MTUS2Q5JR59 1369 aa7.5□□□□□ -1.21
GTF3C3-208ENST00000455546 CCNB3Q8WWL7 1395 aa7.5□□□□□ -1.21
GTF3C3-208ENST00000455546 ZRANB1Q9UGI0 708 aa7.5□□□□□ -1.21
GTF3C3-208ENST00000455546 C3P01024 1663 aa7.5□□□□□ -1.21
GTF3C3-208ENST00000455546 STRCQ7RTU9 1775 aa7.49□□□□□ -1.21
GTF3C3-208ENST00000455546 SYCP2Q9BX26 1530 aa7.49□□□□□ -1.21
GTF3C3-208ENST00000455546 PREX1Q8TCU6 1659 aa7.49□□□□□ -1.21
GTF3C3-208ENST00000455546 GTPBP6O43824 516 aaPredicted RBP7.49□□□□□ -1.21
GTF3C3-208ENST00000455546 CD44P16070 742 aaKnown RBP7.49□□□□□ -1.21
GTF3C3-208ENST00000455546 GGT6Q6P531 493 aa7.49□□□□□ -1.21
GTF3C3-208ENST00000455546 CERKQ8TCT0 537 aa7.49□□□□□ -1.21
GTF3C3-208ENST00000455546 SGIP1Q9BQI5 828 aa7.49□□□□□ -1.21
GTF3C3-208ENST00000455546 MAP3K13O43283 966 aa7.48□□□□□ -1.21
GTF3C3-208ENST00000455546 PDAP1Q13442 181 aaKnown RBP7.48□□□□□ -1.21
GTF3C3-208ENST00000455546 IFNL1Q8IU54 200 aa7.48□□□□□ -1.21
GTF3C3-208ENST00000455546 PHF12Q96QT6 1004 aa7.48□□□□□ -1.21
GTF3C3-208ENST00000455546 ZMYM3Q14202 1370 aa7.47□□□□□ -1.21
GTF3C3-208ENST00000455546 CEP162Q5TB80 1403 aa7.47□□□□□ -1.21
GTF3C3-208ENST00000455546 AGLP35573 1532 aa7.47□□□□□ -1.21
GTF3C3-208ENST00000455546 REREQ9P2R6 1566 aa7.46□□□□□ -1.21
GTF3C3-208ENST00000455546 UHRF1BP1Q6BDS2 1440 aa7.46□□□□□ -1.21
GTF3C3-208ENST00000455546 PSEN1P49768 467 aa7.46□□□□□ -1.22
GTF3C3-208ENST00000455546 ZNF579Q8NAF0 562 aaKnown RBP7.46□□□□□ -1.22
GTF3C3-208ENST00000455546 KIF12Q96FN5 646 aa7.46□□□□□ -1.22
GTF3C3-208ENST00000455546 KIAA1107Q9UPP5 1409 aa7.45□□□□□ -1.22
GTF3C3-208ENST00000455546 ATP7AQ04656 1500 aa7.45□□□□□ -1.22
GTF3C3-208ENST00000455546 NCKAP5LQ9HCH0 1330 aa7.45□□□□□ -1.22
GTF3C3-208ENST00000455546 TIAM1Q13009 1591 aa7.45□□□□□ -1.22
GTF3C3-208ENST00000455546 CLTCQ00610 1675 aaKnown RBP7.44□□□□□ -1.22
GTF3C3-208ENST00000455546 A2MP01023 1474 aa7.44□□□□□ -1.22
GTF3C3-208ENST00000455546 KANK4Q5T7N3 995 aaPredicted RBP7.44□□□□□ -1.22
GTF3C3-208ENST00000455546 CFAP65Q6ZU64 1925 aaKnown RBP7.44□□□□□ -1.22
GTF3C3-208ENST00000455546 PLEKHH2Q8IVE3 1493 aa7.43□□□□□ -1.22
GTF3C3-208ENST00000455546 MBD5Q9P267 1494 aa7.43□□□□□ -1.22
GTF3C3-208ENST00000455546 KIF3BO15066 747 aa7.43□□□□□ -1.22
GTF3C3-208ENST00000455546 FBXO31Q5XUX0 539 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms