RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 CNTLNQ9NXG0 1405 aa21.43■■□□□ 1.02
HMGXB4-204ENST00000455359 KDM4FA0A1W2PPD8 638 aa21.41■■□□□ 1.02
HMGXB4-204ENST00000455359 KANK1Q14678 1352 aa21.41■■□□□ 1.02
HMGXB4-204ENST00000455359 WASHC2CQ9Y4E1 1318 aa21.4■■□□□ 1.02
HMGXB4-204ENST00000455359 RNF17Q9BXT8 1623 aaKnown RBP21.4■■□□□ 1.02
HMGXB4-204ENST00000455359 SETD5Q9C0A6 1442 aa21.4■■□□□ 1.02
HMGXB4-204ENST00000455359 HRCP23327 699 aa21.39■■□□□ 1.01
HMGXB4-204ENST00000455359 ADAMTSL3P82987 1691 aa21.37■■□□□ 1.01
HMGXB4-204ENST00000455359 KDM5DQ9BY66 1539 aa21.37■■□□□ 1.01
HMGXB4-204ENST00000455359 PRDM15P57071 1507 aaPredicted RBP21.36■■□□□ 1.01
HMGXB4-204ENST00000455359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■■□□□ 12.6
HMGXB4-204ENST00000455359 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
HMGXB4-204ENST00000455359 DEPDC5O75140 1603 aa21.34■■□□□ 1.01
HMGXB4-204ENST00000455359 NUP155O75694 1391 aa21.33■■□□□ 1
HMGXB4-204ENST00000455359 MROH1Q8NDA8 1641 aa21.32■■□□□ 1
HMGXB4-204ENST00000455359 ZMYM3Q14202 1370 aa21.32■■□□□ 1
HMGXB4-204ENST00000455359 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
HMGXB4-204ENST00000455359 ABCC3O15438 1527 aa21.3■■□□□ 1
HMGXB4-204ENST00000455359 LMTK2Q8IWU2 1503 aa21.3■■□□□ 1
HMGXB4-204ENST00000455359 MADDQ8WXG6 1647 aa21.3■■□□□ 1
HMGXB4-204ENST00000455359 RAB3GAP2Q9H2M9 1393 aa21.3■■□□□ 1
HMGXB4-204ENST00000455359 UNC13BO14795 1591 aa21.3■■□□□ 1
HMGXB4-204ENST00000455359 PTPRMP28827 1452 aa21.29■■□□□ 1
HMGXB4-204ENST00000455359 ARHGAP31Q2M1Z3 1444 aa21.28■■□□□ 1
HMGXB4-204ENST00000455359 TRIM52Q96A61 297 aa21.27■□□□□ 0.99
HMGXB4-204ENST00000455359 ZC3H13Q5T200 1668 aaKnown RBP21.26■□□□□ 0.99
HMGXB4-204ENST00000455359 FER1L4A9Z1Z3 1794 aa21.24■□□□□ 0.99
HMGXB4-204ENST00000455359 PZPP20742 1482 aa21.23■□□□□ 0.99
HMGXB4-204ENST00000455359 MROH2AA6NES4 1674 aa21.23■□□□□ 0.99
HMGXB4-204ENST00000455359 NPATQ14207 1427 aa21.22■□□□□ 0.99
HMGXB4-204ENST00000455359 RPRD2Q5VT52 1461 aaKnown RBP21.21■□□□□ 0.99
HMGXB4-204ENST00000455359 IQGAP3Q86VI3 1631 aa21.21■□□□□ 0.99
HMGXB4-204ENST00000455359 RIMS1Q86UR5 1692 aaKnown RBP21.21■□□□□ 0.99
HMGXB4-204ENST00000455359 CEBPAP49715 358 aaPredicted RBP21.2■□□□□ 0.98
HMGXB4-204ENST00000455359 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
HMGXB4-204ENST00000455359 CLTCQ00610 1675 aaKnown RBP21.19■□□□□ 0.98
HMGXB4-204ENST00000455359 MPHOSPH9Q99550 1183 aa21.18■□□□□ 0.98
HMGXB4-204ENST00000455359 PCGF6Q9BYE7 350 aa21.18■□□□□ 0.98
HMGXB4-204ENST00000455359 EFCAB6Q5THR3 1501 aa21.17■□□□□ 0.98
HMGXB4-204ENST00000455359 TET3O43151 1660 aa21.15■□□□□ 0.98
HMGXB4-204ENST00000455359 FBXO31Q5XUX0 539 aaPredicted RBP21.15■□□□□ 0.98
HMGXB4-204ENST00000455359 CAMSAP1Q5T5Y3 1602 aa21.14■□□□□ 0.97
HMGXB4-204ENST00000455359 PKD2Q13563 968 aa21.13■□□□□ 0.97
HMGXB4-204ENST00000455359 TNRQ92752 1358 aa21.13■□□□□ 0.97
HMGXB4-204ENST00000455359 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
HMGXB4-204ENST00000455359 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
HMGXB4-204ENST00000455359 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
HMGXB4-204ENST00000455359 NOS1P29475 1434 aa21.12■□□□□ 0.97
HMGXB4-204ENST00000455359 C3P01024 1663 aa21.12■□□□□ 0.97
HMGXB4-204ENST00000455359 CEP152O94986 1710 aa21.11■□□□□ 0.97
HMGXB4-204ENST00000455359 SPATA31D1Q6ZQQ2 1576 aa21.1■□□□□ 0.97
HMGXB4-204ENST00000455359 SLC52A1Q9NWF4 448 aa21.1■□□□□ 0.97
HMGXB4-204ENST00000455359 PTPRTO14522 1441 aa21.09■□□□□ 0.97
HMGXB4-204ENST00000455359 NLRP1Q9C000 1473 aa21.08■□□□□ 0.96
HMGXB4-204ENST00000455359 SETD1BQ9UPS6 1966 aaKnown RBP21.05■□□□□ 0.96
HMGXB4-204ENST00000455359 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
HMGXB4-204ENST00000455359 E9PCH4 1651 aa21.03■□□□□ 0.96
HMGXB4-204ENST00000455359 PREX1Q8TCU6 1659 aa21.01■□□□□ 0.95
HMGXB4-204ENST00000455359 IDI1Q13907 227 aa21.01■□□□□ 0.95
HMGXB4-204ENST00000455359 A2ML1A8K2U0 1454 aa21■□□□□ 0.95
HMGXB4-204ENST00000455359 PLA2R1Q13018 1463 aa21■□□□□ 0.95
HMGXB4-204ENST00000455359 FOXD1Q16676 465 aa20.99■□□□□ 0.95
HMGXB4-204ENST00000455359 TRPM2O94759 1503 aa20.98■□□□□ 0.95
HMGXB4-204ENST00000455359 THEMISQ8N1K5 641 aaPredicted RBP20.98■□□□□ 0.95
HMGXB4-204ENST00000455359 SYNMO15061 1565 aa20.97■□□□□ 0.95
HMGXB4-204ENST00000455359 ANKRD30BQ9BXX2 1392 aa20.97■□□□□ 0.95
HMGXB4-204ENST00000455359 DHX57Q6P158 1386 aaKnown RBP20.96■□□□□ 0.95
HMGXB4-204ENST00000455359 LMTK3Q96Q04 1460 aa20.95■□□□□ 0.94
HMGXB4-204ENST00000455359 STAG3Q9UJ98 1225 aa20.95■□□□□ 0.94
HMGXB4-204ENST00000455359 CCDC144AA2RUR9 1427 aa20.94■□□□□ 0.94
HMGXB4-204ENST00000455359 MYO3AQ8NEV4 1616 aa20.94■□□□□ 0.94
HMGXB4-204ENST00000455359 CEP170BQ9Y4F5 1589 aaPredicted RBP20.93■□□□□ 0.94
HMGXB4-204ENST00000455359 UGGT1Q9NYU2 1555 aa20.91■□□□□ 0.94
HMGXB4-204ENST00000455359 PIK3C2BO00750 1634 aa20.91■□□□□ 0.94
HMGXB4-204ENST00000455359 SPHKAPQ2M3C7 1700 aa20.9■□□□□ 0.94
HMGXB4-204ENST00000455359 ZNF142P52746 1687 aaPredicted RBP20.89■□□□□ 0.93
HMGXB4-204ENST00000455359 HDGFP51858 240 aaKnown RBP20.88■□□□□ 0.93
HMGXB4-204ENST00000455359 KDM5AP29375 1690 aaKnown RBP20.88■□□□□ 0.93
HMGXB4-204ENST00000455359 ADGRB3O60242 1522 aa20.87■□□□□ 0.93
HMGXB4-204ENST00000455359 CHGAP10645 457 aaKnown RBP20.86■□□□□ 0.93
HMGXB4-204ENST00000455359 TMEM2Q9UHN6 1383 aa20.86■□□□□ 0.93
HMGXB4-204ENST00000455359 CFAP65Q6ZU64 1925 aaKnown RBP20.86■□□□□ 0.93
HMGXB4-204ENST00000455359 RPGRIP1LQ68CZ1 1315 aa20.85■□□□□ 0.93
HMGXB4-204ENST00000455359 CLSPNQ9HAW4 1339 aa20.85■□□□□ 0.93
HMGXB4-204ENST00000455359 HSPA2P54652 639 aa20.84■□□□□ 0.93
HMGXB4-204ENST00000455359 ANKLE2Q86XL3 938 aa20.84■□□□□ 0.93
HMGXB4-204ENST00000455359 CLTCL1P53675 1640 aa20.84■□□□□ 0.93
HMGXB4-204ENST00000455359 NEURL4Q96JN8 1562 aa20.84■□□□□ 0.93
HMGXB4-204ENST00000455359 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.83■□□□□ 0.93
HMGXB4-204ENST00000455359 EID1Q9Y6B2 187 aa20.83■□□□□ 0.93
HMGXB4-204ENST00000455359 ARHGAP23Q9P227 1491 aa20.83■□□□□ 0.92
HMGXB4-204ENST00000455359 SLIT1O75093 1534 aa20.82■□□□□ 0.92
HMGXB4-204ENST00000455359 SPATA31E1Q6ZUB1 1445 aa20.82■□□□□ 0.92
HMGXB4-204ENST00000455359 TMEM131LA2VDJ0 1609 aa20.81■□□□□ 0.92
HMGXB4-204ENST00000455359 ZNF326Q5BKZ1 582 aaKnown RBP20.8■□□□□ 0.92
HMGXB4-204ENST00000455359 UBR1Q8IWV7 1749 aa20.8■□□□□ 0.92
HMGXB4-204ENST00000455359 TXNDC2Q86VQ3 553 aa20.79■□□□□ 0.92
HMGXB4-204ENST00000455359 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
HMGXB4-204ENST00000455359 STAC3Q96MF2 364 aa20.78■□□□□ 0.92
HMGXB4-204ENST00000455359 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms