RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 KIF7Q2M1P5 1343 aa9.76□□□□□ -0.85
RIF1-206ENST00000453091 ZNF428Q96B54 188 aa9.76□□□□□ -0.85
RIF1-206ENST00000453091 NECTIN2Q92692 538 aa9.76□□□□□ -0.85
RIF1-206ENST00000453091 NPHP1O15259 732 aa9.75□□□□□ -0.85
RIF1-206ENST00000453091 EFCAB2Q5VUJ9 269 aa9.75□□□□□ -0.85
RIF1-206ENST00000453091 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
RIF1-206ENST00000453091 WASHC2AQ641Q2 1341 aa9.75□□□□□ -0.85
RIF1-206ENST00000453091 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
RIF1-206ENST00000453091 CSB-PGBD3P0DP91 1061 aa9.75□□□□□ -0.85
RIF1-206ENST00000453091 TRIM6-TRIM34B2RNG4 842 aa9.74□□□□□ -0.85
RIF1-206ENST00000453091 HDGFL2Q7Z4V5 671 aaPredicted RBP9.74□□□□□ -0.85
RIF1-206ENST00000453091 NFKBIBQ15653 356 aa9.74□□□□□ -0.85
RIF1-206ENST00000453091 ANKRD30AQ9BXX3 1397 aa9.74□□□□□ -0.85
RIF1-206ENST00000453091 MINK1Q8N4C8 1332 aaPredicted RBP9.74□□□□□ -0.85
RIF1-206ENST00000453091 PDS5BQ9NTI5 1447 aa9.73□□□□□ -0.85
RIF1-206ENST00000453091 WASHC2CQ9Y4E1 1318 aa9.73□□□□□ -0.85
RIF1-206ENST00000453091 CYB5RLQ6IPT4 315 aa9.73□□□□□ -0.85
RIF1-206ENST00000453091 PANK1Q8TE04 598 aa9.73□□□□□ -0.85
RIF1-206ENST00000453091 PHLDB1Q86UU1 1377 aa9.73□□□□□ -0.85
RIF1-206ENST00000453091 KIF15Q9NS87 1388 aa9.73□□□□□ -0.85
RIF1-206ENST00000453091 RTF1Q92541 710 aaKnown RBP9.73□□□□□ -0.85
RIF1-206ENST00000453091 ATAD2BQ9ULI0 1458 aa9.73□□□□□ -0.85
RIF1-206ENST00000453091 USP47Q96K76 1375 aa9.73□□□□□ -0.85
RIF1-206ENST00000453091 ANKRD45Q5TZF3 282 aa9.72□□□□□ -0.85
RIF1-206ENST00000453091 SPAG9O60271 1321 aaKnown RBP9.72□□□□□ -0.85
RIF1-206ENST00000453091 CENPQQ7L2Z9 268 aaPredicted RBP9.72□□□□□ -0.85
RIF1-206ENST00000453091 C11orf95C9JLR9 678 aaPredicted RBP9.72□□□□□ -0.85
RIF1-206ENST00000453091 CDK11BP21127 795 aaKnown RBP9.72□□□□□ -0.85
RIF1-206ENST00000453091 MCCP23508 829 aa9.72□□□□□ -0.85
RIF1-206ENST00000453091 AKNAQ7Z591 1439 aa9.72□□□□□ -0.85
RIF1-206ENST00000453091 TOP2AP11388 1531 aaKnown RBP9.71□□□□□ -0.85
RIF1-206ENST00000453091 IPO8O15397 1037 aaKnown RBP9.71□□□□□ -0.85
RIF1-206ENST00000453091 HSP90AA2PQ14568 343 aaPredicted RBP9.71□□□□□ -0.85
RIF1-206ENST00000453091 FRAT2O75474 233 aaPredicted RBP9.71□□□□□ -0.86
RIF1-206ENST00000453091 CALD1Q05682 793 aaKnown RBP9.71□□□□□ -0.86
RIF1-206ENST00000453091 CHAF1AQ13111 956 aaPredicted RBP9.71□□□□□ -0.86
RIF1-206ENST00000453091 CCDC7Q96M83 1385 aa9.71□□□□□ -0.86
RIF1-206ENST00000453091 HSP90B1P14625 803 aaKnown RBP9.7□□□□□ -0.86
RIF1-206ENST00000453091 TMEM132EQ6IEE7 984 aa9.7□□□□□ -0.86
RIF1-206ENST00000453091 PDE3BQ13370 1112 aa9.7□□□□□ -0.86
RIF1-206ENST00000453091 NGEFQ8N5V2 710 aa9.7□□□□□ -0.86
RIF1-206ENST00000453091 DDX49Q9Y6V7 483 aaKnown RBP9.7□□□□□ -0.86
RIF1-206ENST00000453091 CCDC18Q5T9S5 1454 aa9.7□□□□□ -0.86
RIF1-206ENST00000453091 NUTM2GQ5VZR2 741 aa9.7□□□□□ -0.86
RIF1-206ENST00000453091 IGF1RP08069 1367 aa9.69□□□□□ -0.86
RIF1-206ENST00000453091 CARMIL2Q6F5E8 1435 aa9.69□□□□□ -0.86
RIF1-206ENST00000453091 CHMP3Q9Y3E7 222 aa9.69□□□□□ -0.86
RIF1-206ENST00000453091 RILPL2Q969X0 211 aa9.69□□□□□ -0.86
RIF1-206ENST00000453091 DNAJC5BQ9UF47 199 aa9.68□□□□□ -0.86
RIF1-206ENST00000453091 AQRO60306 1485 aaKnown RBP eCLIP9.68□□□□□ -0.864e-7■■■■■ 36.2
RIF1-206ENST00000453091 KIAA2012Q0VF49 1180 aa9.68□□□□□ -0.86
RIF1-206ENST00000453091 NGDNQ8NEJ9 315 aaKnown RBP9.68□□□□□ -0.86
RIF1-206ENST00000453091 CHMP4BQ9H444 224 aaKnown RBP9.68□□□□□ -0.86
RIF1-206ENST00000453091 ADAMTS8Q9UP79 889 aa9.67□□□□□ -0.86
RIF1-206ENST00000453091 NBPF8Q3BBV2 869 aa9.67□□□□□ -0.86
RIF1-206ENST00000453091 ISY1Q9ULR0 285 aaKnown RBP9.67□□□□□ -0.86
RIF1-206ENST00000453091 GOLGA6L6A8MZA4 724 aa9.66□□□□□ -0.86
RIF1-206ENST00000453091 KIAA1211Q6ZU35 1233 aa9.66□□□□□ -0.86
RIF1-206ENST00000453091 FAM13BQ9NYF5 915 aa9.66□□□□□ -0.86
RIF1-206ENST00000453091 MPNDQ8N594 471 aa9.66□□□□□ -0.86
RIF1-206ENST00000453091 SMARCA2P51531 1590 aa9.66□□□□□ -0.86
RIF1-206ENST00000453091 LNPKQ9C0E8 428 aa9.66□□□□□ -0.86
RIF1-206ENST00000453091 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.86
RIF1-206ENST00000453091 CABP2Q9NPB3 220 aa9.65□□□□□ -0.86
RIF1-206ENST00000453091 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
RIF1-206ENST00000453091 HMOX1P09601 288 aa9.65□□□□□ -0.86
RIF1-206ENST00000453091 FANCD2Q9BXW9 1451 aa9.65□□□□□ -0.86
RIF1-206ENST00000453091 BCAR3O75815 825 aa9.65□□□□□ -0.86
RIF1-206ENST00000453091 USP35Q9P2H5 1018 aa9.65□□□□□ -0.86
RIF1-206ENST00000453091 NBPF1Q3BBV0 1214 aa9.65□□□□□ -0.87
RIF1-206ENST00000453091 FBXW7Q969H0 707 aa9.65□□□□□ -0.87
RIF1-206ENST00000453091 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.87
RIF1-206ENST00000453091 FOSBP53539 338 aa9.64□□□□□ -0.87
RIF1-206ENST00000453091 ZKSCAN2Q63HK3 967 aa9.64□□□□□ -0.87
RIF1-206ENST00000453091 AMPHP49418 695 aa9.64□□□□□ -0.87
RIF1-206ENST00000453091 KIF21BO75037 1637 aa9.64□□□□□ -0.87
RIF1-206ENST00000453091 EIF2S2P20042 333 aaKnown RBP9.64□□□□□ -0.87
RIF1-206ENST00000453091 CREBRFQ8IUR6 639 aa9.64□□□□□ -0.87
RIF1-206ENST00000453091 GNL2Q13823 731 aaKnown RBP9.63□□□□□ -0.87
RIF1-206ENST00000453091 E9PSI1 815 aa9.63□□□□□ -0.87
RIF1-206ENST00000453091 C1orf115Q9H7X2 142 aa9.63□□□□□ -0.87
RIF1-206ENST00000453091 MCTP1Q6DN14 999 aa9.63□□□□□ -0.87
RIF1-206ENST00000453091 RBM10P98175 930 aaKnown RBP9.62□□□□□ -0.87
RIF1-206ENST00000453091 PDE4CQ08493 712 aa9.62□□□□□ -0.87
RIF1-206ENST00000453091 DDX11L8A8MPP1 907 aa9.62□□□□□ -0.87
RIF1-206ENST00000453091 AFAP1Q8N556 730 aa9.62□□□□□ -0.87
RIF1-206ENST00000453091 ZNF592Q92610 1267 aa9.62□□□□□ -0.87
RIF1-206ENST00000453091 RNF214Q8ND24 703 aa9.61□□□□□ -0.87
RIF1-206ENST00000453091 STK31Q9BXU1 1019 aa9.61□□□□□ -0.87
RIF1-206ENST00000453091 PTPRGP23470 1445 aa9.61□□□□□ -0.87
RIF1-206ENST00000453091 R3HCC1Q9Y3T6 440 aaKnown RBP9.6□□□□□ -0.87
RIF1-206ENST00000453091 FGD5Q6ZNL6 1462 aa9.6□□□□□ -0.87
RIF1-206ENST00000453091 DZIP1LQ8IYY4 767 aaKnown RBP9.6□□□□□ -0.87
RIF1-206ENST00000453091 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
RIF1-206ENST00000453091 KDM4AO75164 1064 aa9.6□□□□□ -0.87
RIF1-206ENST00000453091 RIPK4P57078 832 aa9.6□□□□□ -0.87
RIF1-206ENST00000453091 C22orf23Q9BZE7 217 aa9.6□□□□□ -0.87
RIF1-206ENST00000453091 CCDC144AA2RUR9 1427 aa9.6□□□□□ -0.87
RIF1-206ENST00000453091 CFAP70Q5T0N1 1121 aa9.59□□□□□ -0.87
RIF1-206ENST00000453091 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms