RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 PRDM15P57071 1507 aaPredicted RBP22.08■■□□□ 1.13
TRAPPC12-211ENST00000452495 RRP7BPQ9NSQ0 103 aa22.08■■□□□ 1.13
TRAPPC12-211ENST00000452495 MROH1Q8NDA8 1641 aa22.08■■□□□ 1.13
TRAPPC12-211ENST00000452495 MROH2AA6NES4 1674 aa22.07■■□□□ 1.12
TRAPPC12-211ENST00000452495 RIMS1Q86UR5 1692 aaKnown RBP22.07■■□□□ 1.12
TRAPPC12-211ENST00000452495 HFM1A2PYH4 1435 aa22.06■■□□□ 1.12
TRAPPC12-211ENST00000452495 ANKRD50Q9ULJ7 1429 aa22.06■■□□□ 1.12
TRAPPC12-211ENST00000452495 UNC13BO14795 1591 aa22.06■■□□□ 1.12
TRAPPC12-211ENST00000452495 CLTCQ00610 1675 aaKnown RBP22.04■■□□□ 1.12
TRAPPC12-211ENST00000452495 KDM5DQ9BY66 1539 aa22.03■■□□□ 1.12
TRAPPC12-211ENST00000452495 NAIPQ13075 1403 aa22.03■■□□□ 1.12
TRAPPC12-211ENST00000452495 CEP152O94986 1710 aa22.02■■□□□ 1.12
TRAPPC12-211ENST00000452495 CNTLNQ9NXG0 1405 aa22■■□□□ 1.11
TRAPPC12-211ENST00000452495 KIF3BO15066 747 aa22■■□□□ 1.11
TRAPPC12-211ENST00000452495 VWDEQ8N2E2 1590 aa21.98■■□□□ 1.11
TRAPPC12-211ENST00000452495 MLECQ14165 292 aa21.97■■□□□ 1.11
TRAPPC12-211ENST00000452495 PPP6R1Q9UPN7 881 aa21.97■■□□□ 1.11
TRAPPC12-211ENST00000452495 C3P01024 1663 aa21.97■■□□□ 1.11
TRAPPC12-211ENST00000452495 CAMSAP1Q5T5Y3 1602 aa21.96■■□□□ 1.11
TRAPPC12-211ENST00000452495 IQGAP3Q86VI3 1631 aa21.96■■□□□ 1.11
TRAPPC12-211ENST00000452495 ABCC3O15438 1527 aa21.96■■□□□ 1.11
TRAPPC12-211ENST00000452495 KDM4FA0A1W2PPD8 638 aa21.94■■□□□ 1.1
TRAPPC12-211ENST00000452495 GGT6Q6P531 493 aa21.94■■□□□ 1.1
TRAPPC12-211ENST00000452495 LMTK2Q8IWU2 1503 aa21.93■■□□□ 1.1
TRAPPC12-211ENST00000452495 TET3O43151 1660 aa21.92■■□□□ 1.1
TRAPPC12-211ENST00000452495 PTPRMP28827 1452 aa21.92■■□□□ 1.1
TRAPPC12-211ENST00000452495 KANK1Q14678 1352 aa21.91■■□□□ 1.1
TRAPPC12-211ENST00000452495 ESF1Q9H501 851 aaKnown RBP21.9■■□□□ 1.1
TRAPPC12-211ENST00000452495 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
TRAPPC12-211ENST00000452495 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.09
TRAPPC12-211ENST00000452495 EFCAB6Q5THR3 1501 aa21.88■■□□□ 1.09
TRAPPC12-211ENST00000452495 WASHC2CQ9Y4E1 1318 aa21.85■■□□□ 1.09
TRAPPC12-211ENST00000452495 PZPP20742 1482 aa21.85■■□□□ 1.09
TRAPPC12-211ENST00000452495 ACIN1Q9UKV3 1341 aaKnown RBP21.84■■□□□ 1.09
TRAPPC12-211ENST00000452495 PREX1Q8TCU6 1659 aa21.83■■□□□ 1.09
TRAPPC12-211ENST00000452495 E9PCH4 1651 aa21.82■■□□□ 1.08
TRAPPC12-211ENST00000452495 ARHGAP31Q2M1Z3 1444 aa21.82■■□□□ 1.08
TRAPPC12-211ENST00000452495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.084e-9■□□□□ 9.3
TRAPPC12-211ENST00000452495 ZMYM3Q14202 1370 aa21.81■■□□□ 1.08
TRAPPC12-211ENST00000452495 RAB3GAP2Q9H2M9 1393 aa21.81■■□□□ 1.08
TRAPPC12-211ENST00000452495 SETD1BQ9UPS6 1966 aaKnown RBP21.81■■□□□ 1.08
TRAPPC12-211ENST00000452495 RPRD2Q5VT52 1461 aaKnown RBP21.8■■□□□ 1.08
TRAPPC12-211ENST00000452495 NPATQ14207 1427 aa21.8■■□□□ 1.08
TRAPPC12-211ENST00000452495 NUP155O75694 1391 aa21.79■■□□□ 1.08
TRAPPC12-211ENST00000452495 CFAP65Q6ZU64 1925 aaKnown RBP21.79■■□□□ 1.08
TRAPPC12-211ENST00000452495 SPATA31D1Q6ZQQ2 1576 aa21.78■■□□□ 1.08
TRAPPC12-211ENST00000452495 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.08
TRAPPC12-211ENST00000452495 SPHKAPQ2M3C7 1700 aa21.76■■□□□ 1.07
TRAPPC12-211ENST00000452495 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC12-211ENST00000452495 ERVK-7P63135 1459 aa21.75■■□□□ 1.07
TRAPPC12-211ENST00000452495 HRCP23327 699 aa21.73■■□□□ 1.07
TRAPPC12-211ENST00000452495 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
TRAPPC12-211ENST00000452495 SYNMO15061 1565 aa21.7■■□□□ 1.06
TRAPPC12-211ENST00000452495 CEBPAP49715 358 aaPredicted RBP21.69■■□□□ 1.06
TRAPPC12-211ENST00000452495 PIK3C2BO00750 1634 aa21.67■■□□□ 1.06
TRAPPC12-211ENST00000452495 NOS1P29475 1434 aa21.67■■□□□ 1.06
TRAPPC12-211ENST00000452495 KDM5AP29375 1690 aaKnown RBP21.66■■□□□ 1.06
TRAPPC12-211ENST00000452495 CEP170BQ9Y4F5 1589 aaPredicted RBP21.66■■□□□ 1.06
TRAPPC12-211ENST00000452495 NLRP1Q9C000 1473 aa21.66■■□□□ 1.06
TRAPPC12-211ENST00000452495 TNRQ92752 1358 aa21.66■■□□□ 1.06
TRAPPC12-211ENST00000452495 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
TRAPPC12-211ENST00000452495 UHRF1BP1Q6BDS2 1440 aa21.65■■□□□ 1.06
TRAPPC12-211ENST00000452495 TRPM2O94759 1503 aa21.65■■□□□ 1.06
TRAPPC12-211ENST00000452495 SLC4A1APQ9BWU0 796 aaKnown RBP21.63■■□□□ 1.05
TRAPPC12-211ENST00000452495 FBXO31Q5XUX0 539 aaPredicted RBP21.62■■□□□ 1.05
TRAPPC12-211ENST00000452495 LMTK3Q96Q04 1460 aa21.62■■□□□ 1.05
TRAPPC12-211ENST00000452495 A2ML1A8K2U0 1454 aa21.61■■□□□ 1.05
TRAPPC12-211ENST00000452495 PTPRTO14522 1441 aa21.61■■□□□ 1.05
TRAPPC12-211ENST00000452495 UBR1Q8IWV7 1749 aa21.6■■□□□ 1.05
TRAPPC12-211ENST00000452495 MPHOSPH9Q99550 1183 aa21.59■■□□□ 1.05
TRAPPC12-211ENST00000452495 KIF1BO60333 1816 aa21.58■■□□□ 1.05
TRAPPC12-211ENST00000452495 CLTCL1P53675 1640 aa21.58■■□□□ 1.04
TRAPPC12-211ENST00000452495 ADGRB3O60242 1522 aa21.57■■□□□ 1.04
TRAPPC12-211ENST00000452495 PKD2Q13563 968 aa21.57■■□□□ 1.04
TRAPPC12-211ENST00000452495 MYO5BQ9ULV0 1848 aa21.57■■□□□ 1.04
TRAPPC12-211ENST00000452495 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
TRAPPC12-211ENST00000452495 UGGT1Q9NYU2 1555 aa21.56■■□□□ 1.04
TRAPPC12-211ENST00000452495 POLR1AO95602 1720 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC12-211ENST00000452495 TMEM131LA2VDJ0 1609 aa21.53■■□□□ 1.04
TRAPPC12-211ENST00000452495 PLA2R1Q13018 1463 aa21.52■■□□□ 1.04
TRAPPC12-211ENST00000452495 SLC52A1Q9NWF4 448 aa21.52■■□□□ 1.04
TRAPPC12-211ENST00000452495 NEURL4Q96JN8 1562 aa21.48■■□□□ 1.03
TRAPPC12-211ENST00000452495 CCDC144AA2RUR9 1427 aa21.46■■□□□ 1.03
TRAPPC12-211ENST00000452495 SLIT1O75093 1534 aa21.45■■□□□ 1.02
TRAPPC12-211ENST00000452495 IDI1Q13907 227 aa21.45■■□□□ 1.02
TRAPPC12-211ENST00000452495 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.02
TRAPPC12-211ENST00000452495 STRCQ7RTU9 1775 aa21.44■■□□□ 1.02
TRAPPC12-211ENST00000452495 ANKRD30BQ9BXX2 1392 aa21.43■■□□□ 1.02
TRAPPC12-211ENST00000452495 ARHGAP23Q9P227 1491 aa21.42■■□□□ 1.02
TRAPPC12-211ENST00000452495 IFT172Q9UG01 1749 aa21.41■■□□□ 1.02
TRAPPC12-211ENST00000452495 THEMISQ8N1K5 641 aaPredicted RBP21.4■■□□□ 1.02
TRAPPC12-211ENST00000452495 PPLO60437 1756 aa21.4■■□□□ 1.02
TRAPPC12-211ENST00000452495 STAG3Q9UJ98 1225 aa21.39■■□□□ 1.01
TRAPPC12-211ENST00000452495 TMEM2Q9UHN6 1383 aa21.36■■□□□ 1.01
TRAPPC12-211ENST00000452495 HSPA2P54652 639 aa21.36■■□□□ 1.01
TRAPPC12-211ENST00000452495 IQGAP1P46940 1657 aa21.36■■□□□ 1.01
TRAPPC12-211ENST00000452495 NEXMIFQ5QGS0 1516 aa21.35■■□□□ 1.01
TRAPPC12-211ENST00000452495 SCAF11Q99590 1463 aaKnown RBP21.35■■□□□ 1.01
TRAPPC12-211ENST00000452495 ZFYVE9O95405 1425 aa21.35■■□□□ 1.01
TRAPPC12-211ENST00000452495 SPATA31E1Q6ZUB1 1445 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms