RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 ABCC3O15438 1527 aa12.8□□□□□ -0.36
CNOT4-207ENST00000451834 SLIT1O75093 1534 aa12.8□□□□□ -0.36
CNOT4-207ENST00000451834 RSPH4AQ5TD94 716 aa12.79□□□□□ -0.36
CNOT4-207ENST00000451834 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
CNOT4-207ENST00000451834 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
CNOT4-207ENST00000451834 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
CNOT4-207ENST00000451834 XIRP1Q702N8 1843 aaKnown RBP12.77□□□□□ -0.37
CNOT4-207ENST00000451834 MYOM3Q5VTT5 1437 aa12.76□□□□□ -0.37
CNOT4-207ENST00000451834 ARHGAP23Q9P227 1491 aa12.76□□□□□ -0.37
CNOT4-207ENST00000451834 IQGAP1P46940 1657 aa12.75□□□□□ -0.37
CNOT4-207ENST00000451834 RPRD2Q5VT52 1461 aaKnown RBP12.74□□□□□ -0.37
CNOT4-207ENST00000451834 PCGF6Q9BYE7 350 aa12.74□□□□□ -0.37
CNOT4-207ENST00000451834 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
CNOT4-207ENST00000451834 EFCAB6Q5THR3 1501 aa12.74□□□□□ -0.37
CNOT4-207ENST00000451834 CPS1P31327 1500 aa12.73□□□□□ -0.37
CNOT4-207ENST00000451834 LAMC1P11047 1609 aa12.72□□□□□ -0.37
CNOT4-207ENST00000451834 DIP2AQ14689 1571 aa12.72□□□□□ -0.37
CNOT4-207ENST00000451834 AEBP2Q6ZN18 517 aaPredicted RBP12.71□□□□□ -0.37
CNOT4-207ENST00000451834 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.37
CNOT4-207ENST00000451834 STRCP1A6NGW2 1772 aa12.7□□□□□ -0.38
CNOT4-207ENST00000451834 ALKQ9UM73 1620 aa12.69□□□□□ -0.38
CNOT4-207ENST00000451834 UHRF1BP1Q6BDS2 1440 aa12.68□□□□□ -0.38
CNOT4-207ENST00000451834 CCNB3Q8WWL7 1395 aa12.67□□□□□ -0.38
CNOT4-207ENST00000451834 SETD1AO15047 1707 aaKnown RBP12.67□□□□□ -0.38
CNOT4-207ENST00000451834 IFT172Q9UG01 1749 aa12.67□□□□□ -0.38
CNOT4-207ENST00000451834 ERVK-7P63135 1459 aa12.65□□□□□ -0.38
CNOT4-207ENST00000451834 ADGRB3O60242 1522 aa12.65□□□□□ -0.38
CNOT4-207ENST00000451834 ROCK1Q13464 1354 aa12.65□□□□□ -0.38
CNOT4-207ENST00000451834 RAPGEF3O95398 923 aa12.65□□□□□ -0.39
CNOT4-207ENST00000451834 E9PCH4 1651 aa12.64□□□□□ -0.39
CNOT4-207ENST00000451834 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
CNOT4-207ENST00000451834 SPHKAPQ2M3C7 1700 aa12.64□□□□□ -0.39
CNOT4-207ENST00000451834 CHD2O14647 1828 aaKnown RBP12.63□□□□□ -0.39
CNOT4-207ENST00000451834 DAPK1P53355 1430 aa12.63□□□□□ -0.39
CNOT4-207ENST00000451834 NOS1P29475 1434 aa12.62□□□□□ -0.39
CNOT4-207ENST00000451834 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
CNOT4-207ENST00000451834 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
CNOT4-207ENST00000451834 ABCC5O15440 1437 aa12.62□□□□□ -0.39
CNOT4-207ENST00000451834 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
CNOT4-207ENST00000451834 MTUS2Q5JR59 1369 aa12.59□□□□□ -0.39
CNOT4-207ENST00000451834 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.39
CNOT4-207ENST00000451834 XRN1Q8IZH2 1706 aaKnown RBP12.58□□□□□ -0.4
CNOT4-207ENST00000451834 MYO5BQ9ULV0 1848 aa12.58□□□□□ -0.4
CNOT4-207ENST00000451834 P3H3Q8IVL6 736 aa12.58□□□□□ -0.4
CNOT4-207ENST00000451834 NRXN3Q9Y4C0 1643 aa12.56□□□□□ -0.4
CNOT4-207ENST00000451834 SETBP1Q9Y6X0 1596 aa12.56□□□□□ -0.4
CNOT4-207ENST00000451834 ZMYM3Q14202 1370 aa12.55□□□□□ -0.4
CNOT4-207ENST00000451834 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
CNOT4-207ENST00000451834 NCOA3Q9Y6Q9 1424 aa12.52□□□□□ -0.4
CNOT4-207ENST00000451834 SPAG9O60271 1321 aaKnown RBP12.52□□□□□ -0.4
CNOT4-207ENST00000451834 UBTFP17480 764 aaKnown RBP12.51□□□□□ -0.41
CNOT4-207ENST00000451834 NKTRP30414 1462 aaKnown RBP12.51□□□□□ -0.41
CNOT4-207ENST00000451834 PPLO60437 1756 aa12.51□□□□□ -0.41
CNOT4-207ENST00000451834 TRPM2O94759 1503 aa12.51□□□□□ -0.41
CNOT4-207ENST00000451834 PKD2Q13563 968 aa12.5□□□□□ -0.41
CNOT4-207ENST00000451834 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
CNOT4-207ENST00000451834 FBXO41Q8TF61 875 aa12.49□□□□□ -0.41
CNOT4-207ENST00000451834 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
CNOT4-207ENST00000451834 MYT1Q01538 1121 aa12.48□□□□□ -0.41
CNOT4-207ENST00000451834 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
CNOT4-207ENST00000451834 KIF1BO60333 1816 aa12.47□□□□□ -0.41
CNOT4-207ENST00000451834 SHPRHQ149N8 1683 aa12.46□□□□□ -0.41
CNOT4-207ENST00000451834 NHSL1Q5SYE7 1610 aa12.45□□□□□ -0.42
CNOT4-207ENST00000451834 CFDP1Q9UEE9 299 aaPredicted RBP12.45□□□□□ -0.42
CNOT4-207ENST00000451834 TNRQ92752 1358 aa12.44□□□□□ -0.42
CNOT4-207ENST00000451834 AHDC1Q5TGY3 1603 aaPredicted RBP12.42□□□□□ -0.42
CNOT4-207ENST00000451834 SCAF11Q99590 1463 aaKnown RBP12.41□□□□□ -0.42
CNOT4-207ENST00000451834 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
CNOT4-207ENST00000451834 ACIN1Q9UKV3 1341 aaKnown RBP12.4□□□□□ -0.42
CNOT4-207ENST00000451834 NEXMIFQ5QGS0 1516 aa12.4□□□□□ -0.43
CNOT4-207ENST00000451834 CLTCL1P53675 1640 aa12.39□□□□□ -0.43
CNOT4-207ENST00000451834 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
CNOT4-207ENST00000451834 PIK3R4Q99570 1358 aa12.39□□□□□ -0.43
CNOT4-207ENST00000451834 KIAA1210Q9ULL0 1709 aa12.38□□□□□ -0.43
CNOT4-207ENST00000451834 ANKRD30AQ9BXX3 1397 aa12.38□□□□□ -0.43
CNOT4-207ENST00000451834 KIF15Q9NS87 1388 aa12.37□□□□□ -0.43
CNOT4-207ENST00000451834 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
CNOT4-207ENST00000451834 ILDR1Q86SU0 546 aaPredicted RBP12.36□□□□□ -0.43
CNOT4-207ENST00000451834 MARF1Q9Y4F3 1742 aaKnown RBP12.35□□□□□ -0.43
CNOT4-207ENST00000451834 NRXN1Q9ULB1 1477 aa12.35□□□□□ -0.43
CNOT4-207ENST00000451834 DCCP43146 1447 aa12.35□□□□□ -0.43
CNOT4-207ENST00000451834 HNRNPMP52272 730 aaKnown RBP eCLIP12.34□□□□□ -0.43
CNOT4-207ENST00000451834 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
CNOT4-207ENST00000451834 ADGRB2O60241 1585 aa12.33□□□□□ -0.44
CNOT4-207ENST00000451834 HFM1A2PYH4 1435 aa12.33□□□□□ -0.44
CNOT4-207ENST00000451834 ZNF644Q9H582 1327 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-207ENST00000451834 COL16A1Q07092 1604 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-207ENST00000451834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-207ENST00000451834 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
CNOT4-207ENST00000451834 NALCNQ8IZF0 1738 aa12.32□□□□□ -0.44
CNOT4-207ENST00000451834 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.32□□□□□ -0.44
CNOT4-207ENST00000451834 PLEKHG1Q9ULL1 1385 aa12.32□□□□□ -0.44
CNOT4-207ENST00000451834 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
CNOT4-207ENST00000451834 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-207ENST00000451834 ANKRD50Q9ULJ7 1429 aa12.3□□□□□ -0.44
CNOT4-207ENST00000451834 MED1Q15648 1581 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-207ENST00000451834 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-207ENST00000451834 TMEM2Q9UHN6 1383 aa12.29□□□□□ -0.44
CNOT4-207ENST00000451834 CRYBG1Q9Y4K1 1723 aa12.28□□□□□ -0.44
CNOT4-207ENST00000451834 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms