RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 PPP4R2Q9NY27 417 aa30.17■■■□□ 2.42
TTC3-210ENST00000450533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.17■■■□□ 2.428e-9■■■■□ 23.3
TTC3-210ENST00000450533 ERICH6BQ5W0A0 696 aa30.17■■■□□ 2.42
TTC3-210ENST00000450533 ERCC6L2Q5T890 1561 aa30.16■■■□□ 2.42
TTC3-210ENST00000450533 CCDC144AA2RUR9 1427 aa30.15■■■□□ 2.42
TTC3-210ENST00000450533 ANP32EQ9BTT0 268 aa30.13■■■□□ 2.41
TTC3-210ENST00000450533 TMC1Q8TDI8 760 aa30.12■■■□□ 2.41
TTC3-210ENST00000450533 SHROOM2Q13796 1616 aa30.11■■■□□ 2.41
TTC3-210ENST00000450533 B4GALNT3Q6L9W6 998 aa30.1■■■□□ 2.41
TTC3-210ENST00000450533 PNISRQ8TF01 805 aaKnown RBP30.1■■■□□ 2.41
TTC3-210ENST00000450533 PLA2R1Q13018 1463 aa30.08■■■□□ 2.41
TTC3-210ENST00000450533 PRAG1Q86YV5 1406 aa30.08■■■□□ 2.41
TTC3-210ENST00000450533 NBPF1Q3BBV0 1214 aa30.08■■■□□ 2.41
TTC3-210ENST00000450533 PLEKHH2Q8IVE3 1493 aa30.08■■■□□ 2.41
TTC3-210ENST00000450533 ABCC2Q92887 1545 aa30.07■■■□□ 2.4
TTC3-210ENST00000450533 MAST1Q9Y2H9 1570 aa30.06■■■□□ 2.4
TTC3-210ENST00000450533 UNC13BO14795 1591 aa30.06■■■□□ 2.4
TTC3-210ENST00000450533 SMG6Q86US8 1419 aaKnown RBP30.05■■■□□ 2.4
TTC3-210ENST00000450533 MYO5CQ9NQX4 1742 aa30.04■■■□□ 2.4
TTC3-210ENST00000450533 TRPM1Q7Z4N2 1603 aa30.03■■■□□ 2.4
TTC3-210ENST00000450533 NUDCQ9Y266 331 aa30.02■■■□□ 2.4
TTC3-210ENST00000450533 A2MP01023 1474 aa30■■■□□ 2.39
TTC3-210ENST00000450533 MYBBP1AQ9BQG0 1328 aaKnown RBP29.99■■■□□ 2.39
TTC3-210ENST00000450533 PLXNC1O60486 1568 aa29.98■■■□□ 2.39
TTC3-210ENST00000450533 E9PCH4 1651 aa29.97■■■□□ 2.39
TTC3-210ENST00000450533 RALBP1Q15311 655 aa29.96■■■□□ 2.39
TTC3-210ENST00000450533 IQGAP3Q86VI3 1631 aa29.96■■■□□ 2.39
TTC3-210ENST00000450533 BRD4O60885 1362 aaPredicted RBP29.94■■■□□ 2.38
TTC3-210ENST00000450533 DUOX2Q9NRD8 1548 aa29.93■■■□□ 2.38
TTC3-210ENST00000450533 PLCH2O75038 1416 aa29.92■■■□□ 2.38
TTC3-210ENST00000450533 LRPPRCP42704 1394 aaKnown RBP29.91■■■□□ 2.38
TTC3-210ENST00000450533 EFCAB2Q5VUJ9 269 aa29.91■■■□□ 2.38
TTC3-210ENST00000450533 GPRASP1Q5JY77 1395 aa29.9■■■□□ 2.38
TTC3-210ENST00000450533 KTN1Q86UP2 1357 aaKnown RBP29.9■■■□□ 2.38
TTC3-210ENST00000450533 MSH5O43196 834 aa29.89■■■□□ 2.38
TTC3-210ENST00000450533 ZCCHC11Q5TAX3 1644 aaKnown RBP29.89■■■□□ 2.38
TTC3-210ENST00000450533 ERBINQ96RT1 1412 aa29.87■■■□□ 2.37
TTC3-210ENST00000450533 TRAPPC8Q9Y2L5 1435 aa29.87■■■□□ 2.37
TTC3-210ENST00000450533 DISP3Q9P2K9 1392 aa29.87■■■□□ 2.37
TTC3-210ENST00000450533 TESK2Q96S53 571 aa29.86■■■□□ 2.37
TTC3-210ENST00000450533 RNF123Q5XPI4 1314 aa29.86■■■□□ 2.37
TTC3-210ENST00000450533 MAGI2Q86UL8 1455 aa29.85■■■□□ 2.37
TTC3-210ENST00000450533 PER1O15534 1290 aaPredicted RBP29.85■■■□□ 2.37
TTC3-210ENST00000450533 PRDM15P57071 1507 aaPredicted RBP29.84■■■□□ 2.37
TTC3-210ENST00000450533 SALL2Q9Y467 1007 aaPredicted RBP29.84■■■□□ 2.37
TTC3-210ENST00000450533 PARD3Q8TEW0 1356 aa29.83■■■□□ 2.37
TTC3-210ENST00000450533 NLRP13Q86W25 1043 aa29.83■■■□□ 2.37
TTC3-210ENST00000450533 COL17A1Q9UMD9 1497 aaPredicted RBP29.83■■■□□ 2.37
TTC3-210ENST00000450533 ABCC1P33527 1531 aa29.82■■■□□ 2.36
TTC3-210ENST00000450533 FANCIQ9NVI1 1328 aa29.82■■■□□ 2.36
TTC3-210ENST00000450533 CC2D1BQ5T0F9 858 aaKnown RBP29.81■■■□□ 2.36
TTC3-210ENST00000450533 ATP10AO60312 1499 aa29.81■■■□□ 2.36
TTC3-210ENST00000450533 AFAP1Q8N556 730 aa29.8■■■□□ 2.36
TTC3-210ENST00000450533 LAMC1P11047 1609 aa29.78■■■□□ 2.36
TTC3-210ENST00000450533 PANK3Q9H999 370 aa29.78■■■□□ 2.36
TTC3-210ENST00000450533 EIF2AK4Q9P2K8 1649 aaKnown RBP29.77■■■□□ 2.36
TTC3-210ENST00000450533 SPAG9O60271 1321 aaKnown RBP29.77■■■□□ 2.36
TTC3-210ENST00000450533 CLASP1Q7Z460 1538 aa29.76■■■□□ 2.35
TTC3-210ENST00000450533 CCDC136Q96JN2 1154 aa29.76■■■□□ 2.35
TTC3-210ENST00000450533 UHRF1BP1LA0JNW5 1464 aa29.75■■■□□ 2.35
TTC3-210ENST00000450533 TMF1P82094 1093 aa29.74■■■□□ 2.35
TTC3-210ENST00000450533 WASHC2CQ9Y4E1 1318 aa29.65■■■□□ 2.34
TTC3-210ENST00000450533 RNF17Q9BXT8 1623 aaKnown RBP29.65■■■□□ 2.34
TTC3-210ENST00000450533 ZFYVE16Q7Z3T8 1539 aa29.65■■■□□ 2.34
TTC3-210ENST00000450533 RRP1P56182 461 aaKnown RBP29.62■■■□□ 2.33
TTC3-210ENST00000450533 RCAN3Q9UKA8 241 aa29.62■■■□□ 2.33
TTC3-210ENST00000450533 CDCA7LQ96GN5 454 aa29.62■■■□□ 2.33
TTC3-210ENST00000450533 MYT1LQ9UL68 1186 aa29.62■■■□□ 2.33
TTC3-210ENST00000450533 RTEL1-TNFRSF6BF6WH68 1400 aa29.61■■■□□ 2.33
TTC3-210ENST00000450533 MADDQ8WXG6 1647 aa29.61■■■□□ 2.33
TTC3-210ENST00000450533 TRPM2O94759 1503 aa29.59■■■□□ 2.33
TTC3-210ENST00000450533 ERICH6Q7L0X2 663 aa29.58■■■□□ 2.33
TTC3-210ENST00000450533 PDE3BQ13370 1112 aa29.56■■■□□ 2.32
TTC3-210ENST00000450533 CLTCL1P53675 1640 aa29.56■■■□□ 2.32
TTC3-210ENST00000450533 SPHKAPQ2M3C7 1700 aa29.55■■■□□ 2.32
TTC3-210ENST00000450533 KIF3BO15066 747 aa29.55■■■□□ 2.32
TTC3-210ENST00000450533 EXOC6Q8TAG9 804 aa29.55■■■□□ 2.32
TTC3-210ENST00000450533 FANCAO15360 1455 aa29.55■■■□□ 2.32
TTC3-210ENST00000450533 ARAP3Q8WWN8 1544 aa29.55■■■□□ 2.32
TTC3-210ENST00000450533 WDR7Q9Y4E6 1490 aa29.55■■■□□ 2.32
TTC3-210ENST00000450533 PTPRTO14522 1441 aa29.55■■■□□ 2.32
TTC3-210ENST00000450533 CEP152O94986 1710 aa29.53■■■□□ 2.32
TTC3-210ENST00000450533 IQGAP1P46940 1657 aa29.52■■■□□ 2.32
TTC3-210ENST00000450533 ATP7AQ04656 1500 aa29.52■■■□□ 2.32
TTC3-210ENST00000450533 KNSTRNQ9Y448 316 aa29.52■■■□□ 2.32
TTC3-210ENST00000450533 BLMP54132 1417 aaPredicted RBP29.51■■■□□ 2.32
TTC3-210ENST00000450533 SCAPERQ9BY12 1400 aa29.51■■■□□ 2.32
TTC3-210ENST00000450533 DEPDC5O75140 1603 aa29.51■■■□□ 2.31
TTC3-210ENST00000450533 KANK1Q14678 1352 aa29.5■■■□□ 2.31
TTC3-210ENST00000450533 SCAF11Q99590 1463 aaKnown RBP29.49■■■□□ 2.31
TTC3-210ENST00000450533 TET3O43151 1660 aa29.48■■■□□ 2.31
TTC3-210ENST00000450533 ADAMTS8Q9UP79 889 aa29.47■■■□□ 2.31
TTC3-210ENST00000450533 INO80Q9ULG1 1556 aaPredicted RBP29.47■■■□□ 2.31
TTC3-210ENST00000450533 ABCA9Q8IUA7 1624 aa29.46■■■□□ 2.31
TTC3-210ENST00000450533 ADGRL1O94910 1474 aa29.46■■■□□ 2.31
TTC3-210ENST00000450533 PPP2R1AP30153 589 aa29.45■■■□□ 2.3
TTC3-210ENST00000450533 AMER1Q5JTC6 1135 aaPredicted RBP29.44■■■□□ 2.3
TTC3-210ENST00000450533 PLIN1O60240 522 aa29.43■■■□□ 2.3
TTC3-210ENST00000450533 UGGT1Q9NYU2 1555 aa29.43■■■□□ 2.3
TTC3-210ENST00000450533 CDCA8Q53HL2 280 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms