RNA–Protein interactions for RNA: ENST00000449980.1

TRO-216, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-216ENST00000449980 ABCA6Q8N139 1617 aa8.58□□□□□ -1.04
TRO-216ENST00000449980 EID1Q9Y6B2 187 aa8.58□□□□□ -1.04
TRO-216ENST00000449980 MROH2AA6NES4 1674 aa8.58□□□□□ -1.04
TRO-216ENST00000449980 FAM135AQ9P2D6 1515 aa8.58□□□□□ -1.04
TRO-216ENST00000449980 NLRP1Q9C000 1473 aa8.57□□□□□ -1.04
TRO-216ENST00000449980 CEP170BQ9Y4F5 1589 aaPredicted RBP8.57□□□□□ -1.04
TRO-216ENST00000449980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRO-216ENST00000449980 FYCO1Q9BQS8 1478 aa8.57□□□□□ -1.04
TRO-216ENST00000449980 NPHP4O75161 1426 aaPredicted RBP8.56□□□□□ -1.04
TRO-216ENST00000449980 ATP7AQ04656 1500 aa8.56□□□□□ -1.04
TRO-216ENST00000449980 MED14O60244 1454 aa8.56□□□□□ -1.04
TRO-216ENST00000449980 KIDINS220Q9ULH0 1771 aa8.56□□□□□ -1.04
TRO-216ENST00000449980 PREX2Q70Z35 1606 aa8.55□□□□□ -1.04
TRO-216ENST00000449980 TXNDC2Q86VQ3 553 aa8.55□□□□□ -1.04
TRO-216ENST00000449980 ZNF644Q9H582 1327 aaPredicted RBP8.54□□□□□ -1.04
TRO-216ENST00000449980 PZPP20742 1482 aa8.54□□□□□ -1.04
TRO-216ENST00000449980 SYCP2Q9BX26 1530 aa8.54□□□□□ -1.04
TRO-216ENST00000449980 MED1Q15648 1581 aaPredicted RBP8.53□□□□□ -1.04
TRO-216ENST00000449980 CDC42BPBQ9Y5S2 1711 aa8.53□□□□□ -1.04
TRO-216ENST00000449980 PLXNC1O60486 1568 aa8.52□□□□□ -1.04
TRO-216ENST00000449980 MBD5Q9P267 1494 aa8.52□□□□□ -1.05
TRO-216ENST00000449980 HDGFP51858 240 aaKnown RBP8.52□□□□□ -1.05
TRO-216ENST00000449980 STAG3Q9UJ98 1225 aa8.52□□□□□ -1.05
TRO-216ENST00000449980 FAM135BQ49AJ0 1406 aa8.52□□□□□ -1.05
TRO-216ENST00000449980 DNMT1P26358 1616 aaKnown RBP8.51□□□□□ -1.05
TRO-216ENST00000449980 ITSN2Q9NZM3 1697 aa8.51□□□□□ -1.05
TRO-216ENST00000449980 RNF39Q9H2S5 420 aa8.51□□□□□ -1.05
TRO-216ENST00000449980 UGGT1Q9NYU2 1555 aa8.51□□□□□ -1.05
TRO-216ENST00000449980 ZNF142P52746 1687 aaPredicted RBP8.5□□□□□ -1.05
TRO-216ENST00000449980 KCNA6P17658 529 aa8.5□□□□□ -1.05
TRO-216ENST00000449980 PPP4R3CPQ6ZMV5 832 aa8.5□□□□□ -1.05
TRO-216ENST00000449980 RGS17Q9UGC6 210 aaPredicted RBP8.5□□□□□ -1.05
TRO-216ENST00000449980 MYO3AQ8NEV4 1616 aa8.5□□□□□ -1.05
TRO-216ENST00000449980 KDM5DQ9BY66 1539 aa8.49□□□□□ -1.05
TRO-216ENST00000449980 CEP162Q5TB80 1403 aa8.49□□□□□ -1.05
TRO-216ENST00000449980 LRRC7Q96NW7 1537 aa8.49□□□□□ -1.05
TRO-216ENST00000449980 PROSER2Q86WR7 435 aaPredicted RBP8.48□□□□□ -1.05
TRO-216ENST00000449980 CCDC141Q6ZP82 1450 aa8.48□□□□□ -1.05
TRO-216ENST00000449980 CLTCQ00610 1675 aaKnown RBP8.48□□□□□ -1.05
TRO-216ENST00000449980 INO80Q9ULG1 1556 aaPredicted RBP8.48□□□□□ -1.05
TRO-216ENST00000449980 SUPT6HQ7KZ85 1726 aaKnown RBP8.47□□□□□ -1.05
TRO-216ENST00000449980 LTKP29376 864 aa8.47□□□□□ -1.05
TRO-216ENST00000449980 ZNF772Q68DY9 489 aaPredicted RBP8.47□□□□□ -1.05
TRO-216ENST00000449980 DEPDC5O75140 1603 aa8.47□□□□□ -1.05
TRO-216ENST00000449980 POTEAQ6S8J7 498 aa8.46□□□□□ -1.06
TRO-216ENST00000449980 SLAIN2Q9P270 581 aa8.46□□□□□ -1.06
TRO-216ENST00000449980 VWDEQ8N2E2 1590 aa8.46□□□□□ -1.06
TRO-216ENST00000449980 SCAF11Q99590 1463 aaKnown RBP8.45□□□□□ -1.06
TRO-216ENST00000449980 HOXD11P31277 338 aaPredicted RBP8.45□□□□□ -1.06
TRO-216ENST00000449980 SLC52A1Q9NWF4 448 aa8.45□□□□□ -1.06
TRO-216ENST00000449980 ADGBQ8N7X0 1667 aa8.45□□□□□ -1.06
TRO-216ENST00000449980 KANK1Q14678 1352 aa8.45□□□□□ -1.06
TRO-216ENST00000449980 NEURL4Q96JN8 1562 aa8.44□□□□□ -1.06
TRO-216ENST00000449980 CDC42BPAQ5VT25 1732 aa8.44□□□□□ -1.06
TRO-216ENST00000449980 BCANQ96GW7 911 aa8.44□□□□□ -1.06
TRO-216ENST00000449980 TMEM2Q9UHN6 1383 aa8.44□□□□□ -1.06
TRO-216ENST00000449980 ARHGAP31Q2M1Z3 1444 aa8.44□□□□□ -1.06
TRO-216ENST00000449980 SPATA31A6Q5VVP1 1343 aa8.43□□□□□ -1.06
TRO-216ENST00000449980 MSH6P52701 1360 aa8.43□□□□□ -1.06
TRO-216ENST00000449980 TMEM94Q12767 1356 aa8.43□□□□□ -1.06
TRO-216ENST00000449980 JCADQ9P266 1359 aa8.43□□□□□ -1.06
TRO-216ENST00000449980 MEX3CQ5U5Q3 659 aaKnown RBP8.42□□□□□ -1.06
TRO-216ENST00000449980 EHBP1L1Q8N3D4 1523 aa8.41□□□□□ -1.06
TRO-216ENST00000449980 ERVK-7P63135 1459 aa8.41□□□□□ -1.06
TRO-216ENST00000449980 LRRC9Q6ZRR7 1453 aa8.41□□□□□ -1.06
TRO-216ENST00000449980 NCOA3Q9Y6Q9 1424 aa8.41□□□□□ -1.06
TRO-216ENST00000449980 RXRBP28702 533 aa8.41□□□□□ -1.06
TRO-216ENST00000449980 IDI1Q13907 227 aa8.41□□□□□ -1.06
TRO-216ENST00000449980 CADPS2Q86UW7 1296 aa8.41□□□□□ -1.06
TRO-216ENST00000449980 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.41□□□□□ -1.06
TRO-216ENST00000449980 ARHGAP23Q9P227 1491 aa8.4□□□□□ -1.06
TRO-216ENST00000449980 ATF3P18847 181 aa8.4□□□□□ -1.06
TRO-216ENST00000449980 UPF1Q92900 1129 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRO-216ENST00000449980 SLC26A8Q96RN1 970 aa8.4□□□□□ -1.06
TRO-216ENST00000449980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRO-216ENST00000449980 C19orf44Q9H6X5 657 aa8.4□□□□□ -1.06
TRO-216ENST00000449980 TBX22Q9Y458 520 aa8.4□□□□□ -1.06
TRO-216ENST00000449980 SLIT1O75093 1534 aa8.39□□□□□ -1.07
TRO-216ENST00000449980 CAMSAP2Q08AD1 1489 aa8.39□□□□□ -1.07
TRO-216ENST00000449980 NCOA2Q15596 1464 aa8.39□□□□□ -1.07
TRO-216ENST00000449980 MYOM3Q5VTT5 1437 aa8.39□□□□□ -1.07
TRO-216ENST00000449980 APLP2Q06481 763 aa8.39□□□□□ -1.07
TRO-216ENST00000449980 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
TRO-216ENST00000449980 RRP7BPQ9NSQ0 103 aa8.39□□□□□ -1.07
TRO-216ENST00000449980 RNF17Q9BXT8 1623 aaKnown RBP8.39□□□□□ -1.07
TRO-216ENST00000449980 SYNMO15061 1565 aa8.39□□□□□ -1.07
TRO-216ENST00000449980 ABCC3O15438 1527 aa8.39□□□□□ -1.07
TRO-216ENST00000449980 IQGAP1P46940 1657 aa8.38□□□□□ -1.07
TRO-216ENST00000449980 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
TRO-216ENST00000449980 ALKQ9UM73 1620 aa8.38□□□□□ -1.07
TRO-216ENST00000449980 TIAM1Q13009 1591 aa8.38□□□□□ -1.07
TRO-216ENST00000449980 POLR1AO95602 1720 aaPredicted RBP8.37□□□□□ -1.07
TRO-216ENST00000449980 ARHGEF5Q12774 1597 aa8.37□□□□□ -1.07
TRO-216ENST00000449980 LRRIQ1Q96JM4 1722 aa8.37□□□□□ -1.07
TRO-216ENST00000449980 FGD6Q6ZV73 1430 aa8.37□□□□□ -1.07
TRO-216ENST00000449980 KIF15Q9NS87 1388 aa8.36□□□□□ -1.07
TRO-216ENST00000449980 ERBINQ96RT1 1412 aa8.36□□□□□ -1.07
TRO-216ENST00000449980 DUOX2Q9NRD8 1548 aa8.35□□□□□ -1.07
TRO-216ENST00000449980 LRRC59Q96AG4 307 aaKnown RBP8.35□□□□□ -1.07
TRO-216ENST00000449980 NGLY1Q96IV0 654 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms