RNA–Protein interactions for RNA: ENST00000449980.1

TRO-216, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-216ENST00000449980 AEBP2Q6ZN18 517 aaPredicted RBP13.39□□□□□ -0.27
TRO-216ENST00000449980 NISCHQ9Y2I1 1504 aa13.36□□□□□ -0.27
TRO-216ENST00000449980 CHIC1Q5VXU3 224 aa12.3□□□□□ -0.44
TRO-216ENST00000449980 ABCC9O60706 1549 aa12.29□□□□□ -0.44
TRO-216ENST00000449980 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
TRO-216ENST00000449980 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
TRO-216ENST00000449980 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
TRO-216ENST00000449980 DCAF8L2P0C7V8 631 aa11.55□□□□□ -0.56
TRO-216ENST00000449980 NACADO15069 1562 aa11.52□□□□□ -0.57
TRO-216ENST00000449980 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRO-216ENST00000449980 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
TRO-216ENST00000449980 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
TRO-216ENST00000449980 SHROOM4Q9ULL8 1493 aa11.21□□□□□ -0.61
TRO-216ENST00000449980 PHF23Q9BUL5 403 aaPredicted RBP11.17□□□□□ -0.62
TRO-216ENST00000449980 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
TRO-216ENST00000449980 CECR2Q9BXF3 1484 aa11.15□□□□□ -0.62
TRO-216ENST00000449980 DNAJC5Q9H3Z4 198 aa11.15□□□□□ -0.62
TRO-216ENST00000449980 DCAF1Q9Y4B6 1507 aa11.07□□□□□ -0.64
TRO-216ENST00000449980 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.64
TRO-216ENST00000449980 UNC13AQ9UPW8 1703 aa11.02□□□□□ -0.65
TRO-216ENST00000449980 ZCCHC6Q5VYS8 1495 aaKnown RBP10.98□□□□□ -0.65
TRO-216ENST00000449980 EIF4G1Q04637 1599 aaKnown RBP10.98□□□□□ -0.65
TRO-216ENST00000449980 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
TRO-216ENST00000449980 CUX2O14529 1486 aa10.78□□□□□ -0.68
TRO-216ENST00000449980 ERCC6Q03468 1493 aa10.71□□□□□ -0.69
TRO-216ENST00000449980 NCAPD3P42695 1498 aa10.7□□□□□ -0.7
TRO-216ENST00000449980 FOXD1Q16676 465 aa10.66□□□□□ -0.7
TRO-216ENST00000449980 ATAD2BQ9ULI0 1458 aa10.56□□□□□ -0.72
TRO-216ENST00000449980 SMARCA2P51531 1590 aa10.53□□□□□ -0.72
TRO-216ENST00000449980 PDS5BQ9NTI5 1447 aa10.5□□□□□ -0.73
TRO-216ENST00000449980 TRIM41Q8WV44 630 aa10.49□□□□□ -0.73
TRO-216ENST00000449980 HMGXB3Q12766 1538 aa10.48□□□□□ -0.73
TRO-216ENST00000449980 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
TRO-216ENST00000449980 NESP48681 1621 aa10.44□□□□□ -0.74
TRO-216ENST00000449980 BAZ1AQ9NRL2 1556 aaPredicted RBP10.4□□□□□ -0.74
TRO-216ENST00000449980 LAMC3Q9Y6N6 1575 aa10.4□□□□□ -0.74
TRO-216ENST00000449980 OSCARQ8IYS5 282 aa10.4□□□□□ -0.74
TRO-216ENST00000449980 CADPSQ9ULU8 1353 aa10.39□□□□□ -0.75
TRO-216ENST00000449980 SMARCA4P51532 1647 aa10.37□□□□□ -0.75
TRO-216ENST00000449980 PEG3Q9GZU2 1588 aa10.34□□□□□ -0.75
TRO-216ENST00000449980 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
TRO-216ENST00000449980 MRC2Q9UBG0 1479 aa10.3□□□□□ -0.76
TRO-216ENST00000449980 POTEDQ86YR6 584 aa10.29□□□□□ -0.76
TRO-216ENST00000449980 MROH2BQ7Z745 1585 aa10.22□□□□□ -0.77
TRO-216ENST00000449980 CEP164Q9UPV0 1460 aa10.22□□□□□ -0.77
TRO-216ENST00000449980 WDR62O43379 1518 aa10.22□□□□□ -0.77
TRO-216ENST00000449980 FANCD2Q9BXW9 1451 aa10.18□□□□□ -0.78
TRO-216ENST00000449980 CFTRP13569 1480 aa10.17□□□□□ -0.78
TRO-216ENST00000449980 KIF21AQ7Z4S6 1674 aa10.14□□□□□ -0.79
TRO-216ENST00000449980 CYB5RLQ6IPT4 315 aa10.11□□□□□ -0.79
TRO-216ENST00000449980 TRHP20396 242 aaPredicted RBP10.1□□□□□ -0.79
TRO-216ENST00000449980 IFT140Q96RY7 1462 aa10.06□□□□□ -0.8
TRO-216ENST00000449980 ABCC8Q09428 1581 aa10.05□□□□□ -0.8
TRO-216ENST00000449980 URB2Q14146 1524 aaKnown RBP10.04□□□□□ -0.8
TRO-216ENST00000449980 RSF1Q96T23 1441 aaPredicted RBP10.03□□□□□ -0.8
TRO-216ENST00000449980 FBLN2P98095 1184 aa10.01□□□□□ -0.81
TRO-216ENST00000449980 WIZO95785 1651 aa10□□□□□ -0.81
TRO-216ENST00000449980 ARHGEF11O15085 1522 aa10□□□□□ -0.81
TRO-216ENST00000449980 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
TRO-216ENST00000449980 RIMBP3CA6NJZ7 1639 aa9.96□□□□□ -0.81
TRO-216ENST00000449980 RIMBP3BA6NNM3 1639 aa9.96□□□□□ -0.81
TRO-216ENST00000449980 RIMBP3Q9UFD9 1639 aa9.96□□□□□ -0.81
TRO-216ENST00000449980 ZNF608Q9ULD9 1512 aaPredicted RBP9.96□□□□□ -0.82
TRO-216ENST00000449980 CHMP7Q8WUX9 453 aaPredicted RBP9.94□□□□□ -0.82
TRO-216ENST00000449980 TOPBP1Q92547 1522 aa9.92□□□□□ -0.82
TRO-216ENST00000449980 CCDC88BA6NC98 1476 aa9.91□□□□□ -0.82
TRO-216ENST00000449980 AQRO60306 1485 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRO-216ENST00000449980 MSH5O43196 834 aa9.88□□□□□ -0.83
TRO-216ENST00000449980 SOGA1O94964 1423 aa9.88□□□□□ -0.83
TRO-216ENST00000449980 ARAP1Q96P48 1450 aa9.86□□□□□ -0.83
TRO-216ENST00000449980 PIAS4Q8N2W9 510 aaPredicted RBP9.86□□□□□ -0.83
TRO-216ENST00000449980 PPP6R1Q9UPN7 881 aa9.86□□□□□ -0.83
TRO-216ENST00000449980 TDRD9Q8NDG6 1382 aaKnown RBP9.85□□□□□ -0.83
TRO-216ENST00000449980 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
TRO-216ENST00000449980 POLA1P09884 1462 aaPredicted RBP9.81□□□□□ -0.84
TRO-216ENST00000449980 EIF4G3O43432 1585 aaKnown RBP9.8□□□□□ -0.84
TRO-216ENST00000449980 ADRA2BP18089 450 aa9.8□□□□□ -0.84
TRO-216ENST00000449980 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
TRO-216ENST00000449980 GRIN2BQ13224 1484 aa9.79□□□□□ -0.84
TRO-216ENST00000449980 WDR97A6NE52 1622 aa9.77□□□□□ -0.85
TRO-216ENST00000449980 TARBP1Q13395 1621 aaKnown RBP9.77□□□□□ -0.85
TRO-216ENST00000449980 SYNJ1O43426 1573 aa9.76□□□□□ -0.85
TRO-216ENST00000449980 SYNJ2O15056 1496 aa9.76□□□□□ -0.85
TRO-216ENST00000449980 SNAPC4Q5SXM2 1469 aa9.76□□□□□ -0.85
TRO-216ENST00000449980 RAD54L2Q9Y4B4 1467 aa9.76□□□□□ -0.85
TRO-216ENST00000449980 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
TRO-216ENST00000449980 PRDM2Q13029 1718 aa9.73□□□□□ -0.85
TRO-216ENST00000449980 NPM1P06748 294 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRO-216ENST00000449980 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
TRO-216ENST00000449980 FGD5Q6ZNL6 1462 aa9.7□□□□□ -0.86
TRO-216ENST00000449980 CHD1O14646 1710 aa9.68□□□□□ -0.86
TRO-216ENST00000449980 JPH4Q96JJ6 628 aa9.65□□□□□ -0.86
TRO-216ENST00000449980 WRNQ14191 1432 aaPredicted RBP eCLIP9.65□□□□□ -0.87
TRO-216ENST00000449980 ABCA10Q8WWZ4 1543 aa9.63□□□□□ -0.87
TRO-216ENST00000449980 FAM69CQ0P6D2 419 aa9.63□□□□□ -0.87
TRO-216ENST00000449980 PLPPR3Q6T4P5 718 aa9.62□□□□□ -0.87
TRO-216ENST00000449980 CUX1P39880 1505 aa9.61□□□□□ -0.87
TRO-216ENST00000449980 FHAD1B1AJZ9 1412 aa9.61□□□□□ -0.87
TRO-216ENST00000449980 GRIN2AQ12879 1464 aa9.6□□□□□ -0.87
TRO-216ENST00000449980 NUP160Q12769 1436 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms