RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 NUP160Q12769 1436 aa15.16■□□□□ 0.02
SYVN1-204ENST00000449943 RALBP1Q15311 655 aa15.16■□□□□ 0.02
SYVN1-204ENST00000449943 NBPF1Q3BBV0 1214 aa15.16■□□□□ 0.02
SYVN1-204ENST00000449943 SHANK2Q9UPX8 1470 aa15.16■□□□□ 0.02
SYVN1-204ENST00000449943 NBR1Q14596 966 aa15.15■□□□□ 0.02
SYVN1-204ENST00000449943 CC2D1BQ5T0F9 858 aaKnown RBP15.15■□□□□ 0.02
SYVN1-204ENST00000449943 NOP58Q9Y2X3 529 aaKnown RBP15.15■□□□□ 0.02
SYVN1-204ENST00000449943 ARHGEF12Q9NZN5 1544 aa15.15■□□□□ 0.02
SYVN1-204ENST00000449943 RNF123Q5XPI4 1314 aa15.14■□□□□ 0.01
SYVN1-204ENST00000449943 BRD4O60885 1362 aaPredicted RBP15.14■□□□□ 0.01
SYVN1-204ENST00000449943 CCDC144AA2RUR9 1427 aa15.14■□□□□ 0.01
SYVN1-204ENST00000449943 ABCA8O94911 1581 aa15.13■□□□□ 0.01
SYVN1-204ENST00000449943 PTPRGP23470 1445 aa15.13■□□□□ 0.01
SYVN1-204ENST00000449943 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
SYVN1-204ENST00000449943 KTN1Q86UP2 1357 aaKnown RBP15.13■□□□□ 0.01
SYVN1-204ENST00000449943 ANP32AP39687 249 aaKnown RBP15.12■□□□□ 0.01
SYVN1-204ENST00000449943 EXOC6Q8TAG9 804 aa15.12■□□□□ 0.01
SYVN1-204ENST00000449943 RRP1P56182 461 aaKnown RBP15.11■□□□□ 0.01
SYVN1-204ENST00000449943 NLRP13Q86W25 1043 aa15.11■□□□□ 0.01
SYVN1-204ENST00000449943 LRPPRCP42704 1394 aaKnown RBP15.11■□□□□ 0.01
SYVN1-204ENST00000449943 RCAN3Q9UKA8 241 aa15.11■□□□□ 0.01
SYVN1-204ENST00000449943 FAM135AQ9P2D6 1515 aa15.1■□□□□ 0.01
SYVN1-204ENST00000449943 CCDC141Q6ZP82 1450 aa15.1■□□□□ 0.01
SYVN1-204ENST00000449943 NPM2Q86SE8 214 aaKnown RBP15.09■□□□□ 0.01
SYVN1-204ENST00000449943 KDM5DQ9BY66 1539 aa15.09■□□□□ 0.01
SYVN1-204ENST00000449943 CDCA7LQ96GN5 454 aa15.08■□□□□ 0.01
SYVN1-204ENST00000449943 PRAG1Q86YV5 1406 aa15.08■□□□□ 0
SYVN1-204ENST00000449943 SAMD9LQ8IVG5 1584 aa15.06■□□□□ 0
SYVN1-204ENST00000449943 PANK3Q9H999 370 aa15.06■□□□□ 0
SYVN1-204ENST00000449943 DISP3Q9P2K9 1392 aa15.05■□□□□ 0
SYVN1-204ENST00000449943 SYCP2Q9BX26 1530 aa15.05■□□□□ -0
SYVN1-204ENST00000449943 PLIN1O60240 522 aa15.05■□□□□ -0
SYVN1-204ENST00000449943 ARHGAP5Q13017 1502 aa15.05■□□□□ -0
SYVN1-204ENST00000449943 ARHGEF5Q12774 1597 aa15.05■□□□□ -0
SYVN1-204ENST00000449943 PARD3Q8TEW0 1356 aa15.04■□□□□ -0
SYVN1-204ENST00000449943 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
SYVN1-204ENST00000449943 IPO9Q96P70 1041 aaKnown RBP15.04■□□□□ -0
SYVN1-204ENST00000449943 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
SYVN1-204ENST00000449943 DEKP35659 375 aaKnown RBP15.03■□□□□ -0
SYVN1-204ENST00000449943 PER1O15534 1290 aaPredicted RBP15.03■□□□□ -0
SYVN1-204ENST00000449943 A2MP01023 1474 aa15.02■□□□□ -0
SYVN1-204ENST00000449943 PLEKHH2Q8IVE3 1493 aa15.02□□□□□ -0.01
SYVN1-204ENST00000449943 TMF1P82094 1093 aa15.02□□□□□ -0.01
SYVN1-204ENST00000449943 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
SYVN1-204ENST00000449943 TESK2Q96S53 571 aa15.01□□□□□ -0.01
SYVN1-204ENST00000449943 TRPM1Q7Z4N2 1603 aa15□□□□□ -0.01
SYVN1-204ENST00000449943 CDC42BPBQ9Y5S2 1711 aa15□□□□□ -0.01
SYVN1-204ENST00000449943 E9PCH4 1651 aa15□□□□□ -0.01
SYVN1-204ENST00000449943 PDE3BQ13370 1112 aa15□□□□□ -0.01
SYVN1-204ENST00000449943 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
SYVN1-204ENST00000449943 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
SYVN1-204ENST00000449943 COL17A1Q9UMD9 1497 aaPredicted RBP14.98□□□□□ -0.01
SYVN1-204ENST00000449943 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
SYVN1-204ENST00000449943 TTC37Q6PGP7 1564 aa14.97□□□□□ -0.01
SYVN1-204ENST00000449943 RTL5Q5HYW3 569 aaPredicted RBP14.96□□□□□ -0.01
SYVN1-204ENST00000449943 ESF1Q9H501 851 aaKnown RBP14.96□□□□□ -0.01
SYVN1-204ENST00000449943 CRBNQ96SW2 442 aa14.96□□□□□ -0.01
SYVN1-204ENST00000449943 GPRASP1Q5JY77 1395 aa14.96□□□□□ -0.01
SYVN1-204ENST00000449943 TCERG1O14776 1098 aaKnown RBP14.95□□□□□ -0.02
SYVN1-204ENST00000449943 PDE4AP27815 886 aa14.95□□□□□ -0.02
SYVN1-204ENST00000449943 CHGAP10645 457 aaKnown RBP14.94□□□□□ -0.02
SYVN1-204ENST00000449943 ADAMTS8Q9UP79 889 aa14.94□□□□□ -0.02
SYVN1-204ENST00000449943 KNSTRNQ9Y448 316 aa14.94□□□□□ -0.02
SYVN1-204ENST00000449943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.94□□□□□ -0.02
SYVN1-204ENST00000449943 WDR43Q15061 677 aaKnown RBP eCLIP14.93□□□□□ -0.02
SYVN1-204ENST00000449943 PRDM15P57071 1507 aaPredicted RBP14.92□□□□□ -0.02
SYVN1-204ENST00000449943 WASHC2CQ9Y4E1 1318 aa14.92□□□□□ -0.02
SYVN1-204ENST00000449943 LAS1LQ9Y4W2 734 aaKnown RBP14.92□□□□□ -0.02
SYVN1-204ENST00000449943 UNC13BO14795 1591 aa14.92□□□□□ -0.02
SYVN1-204ENST00000449943 C20orf194Q5TEA3 1177 aa14.91□□□□□ -0.02
SYVN1-204ENST00000449943 BLMP54132 1417 aaPredicted RBP14.9□□□□□ -0.02
SYVN1-204ENST00000449943 EFCAB2Q5VUJ9 269 aa14.9□□□□□ -0.02
SYVN1-204ENST00000449943 PPP2R1AP30153 589 aa14.89□□□□□ -0.03
SYVN1-204ENST00000449943 BACH2Q9BYV9 841 aa14.89□□□□□ -0.03
SYVN1-204ENST00000449943 DUOX2Q9NRD8 1548 aa14.88□□□□□ -0.03
SYVN1-204ENST00000449943 MYO5CQ9NQX4 1742 aa14.88□□□□□ -0.03
SYVN1-204ENST00000449943 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
SYVN1-204ENST00000449943 IQGAP3Q86VI3 1631 aa14.88□□□□□ -0.03
SYVN1-204ENST00000449943 CCDC146Q8IYE0 955 aa14.87□□□□□ -0.03
SYVN1-204ENST00000449943 EIF2AK4Q9P2K8 1649 aaKnown RBP14.87□□□□□ -0.03
SYVN1-204ENST00000449943 ERCC6L2Q5T890 1561 aa14.87□□□□□ -0.03
SYVN1-204ENST00000449943 MAST1Q9Y2H9 1570 aa14.87□□□□□ -0.03
SYVN1-204ENST00000449943 AFAP1Q8N556 730 aa14.87□□□□□ -0.03
SYVN1-204ENST00000449943 SPAG9O60271 1321 aaKnown RBP14.86□□□□□ -0.03
SYVN1-204ENST00000449943 MAGI2Q86UL8 1455 aa14.86□□□□□ -0.03
SYVN1-204ENST00000449943 TRAPPC8Q9Y2L5 1435 aa14.86□□□□□ -0.03
SYVN1-204ENST00000449943 MS4A1P11836 297 aa14.85□□□□□ -0.03
SYVN1-204ENST00000449943 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
SYVN1-204ENST00000449943 PLXNC1O60486 1568 aa14.84□□□□□ -0.03
SYVN1-204ENST00000449943 CHD1O14646 1710 aa14.83□□□□□ -0.03
SYVN1-204ENST00000449943 ABCC2Q92887 1545 aa14.83□□□□□ -0.03
SYVN1-204ENST00000449943 ZMYM4Q5VZL5 1548 aa14.83□□□□□ -0.04
SYVN1-204ENST00000449943 LAMC1P11047 1609 aa14.83□□□□□ -0.04
SYVN1-204ENST00000449943 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
SYVN1-204ENST00000449943 PLCH2O75038 1416 aa14.82□□□□□ -0.04
SYVN1-204ENST00000449943 GOLGA2Q08379 1002 aa14.82□□□□□ -0.04
SYVN1-204ENST00000449943 CDCA8Q53HL2 280 aa14.82□□□□□ -0.04
SYVN1-204ENST00000449943 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
SYVN1-204ENST00000449943 NEFMP07197 916 aa14.82□□□□□ -0.04
SYVN1-204ENST00000449943 DUSP27Q5VZP5 1158 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms