RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 ABCC5O15440 1437 aa13.91□□□□□ -0.18
TOP3B-210ENST00000444502 CCDC144AA2RUR9 1427 aa13.91□□□□□ -0.18
TOP3B-210ENST00000444502 CFAP53Q96M91 514 aa13.9□□□□□ -0.18
TOP3B-210ENST00000444502 UBE2Q2Q8WVN8 375 aa13.9□□□□□ -0.18
TOP3B-210ENST00000444502 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
TOP3B-210ENST00000444502 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
TOP3B-210ENST00000444502 ARHGAP5Q13017 1502 aa13.88□□□□□ -0.19
TOP3B-210ENST00000444502 PAK3O75914 559 aaPredicted RBP13.87□□□□□ -0.19
TOP3B-210ENST00000444502 KTN1Q86UP2 1357 aaKnown RBP13.87□□□□□ -0.19
TOP3B-210ENST00000444502 CNTLNQ9NXG0 1405 aa13.87□□□□□ -0.19
TOP3B-210ENST00000444502 NBPF1Q3BBV0 1214 aa13.86□□□□□ -0.19
TOP3B-210ENST00000444502 ANKRD30BQ9BXX2 1392 aa13.86□□□□□ -0.19
TOP3B-210ENST00000444502 KIF21AQ7Z4S6 1674 aa13.86□□□□□ -0.19
TOP3B-210ENST00000444502 C9orf84Q5VXU9 1444 aa13.86□□□□□ -0.19
TOP3B-210ENST00000444502 CTTNBP2Q8WZ74 1663 aa13.86□□□□□ -0.19
TOP3B-210ENST00000444502 PANK3Q9H999 370 aa13.86□□□□□ -0.19
TOP3B-210ENST00000444502 RALBP1Q15311 655 aa13.85□□□□□ -0.19
TOP3B-210ENST00000444502 MORC1Q86VD1 984 aa13.85□□□□□ -0.19
TOP3B-210ENST00000444502 EID1Q9Y6B2 187 aa13.85□□□□□ -0.19
TOP3B-210ENST00000444502 ARHGEF11O15085 1522 aa13.85□□□□□ -0.19
TOP3B-210ENST00000444502 SCAPERQ9BY12 1400 aa13.85□□□□□ -0.19
TOP3B-210ENST00000444502 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
TOP3B-210ENST00000444502 FANCIQ9NVI1 1328 aa13.84□□□□□ -0.19
TOP3B-210ENST00000444502 UGGT2Q9NYU1 1516 aa13.83□□□□□ -0.2
TOP3B-210ENST00000444502 NUDCQ9Y266 331 aa13.83□□□□□ -0.2
TOP3B-210ENST00000444502 ROCK1Q13464 1354 aa13.83□□□□□ -0.2
TOP3B-210ENST00000444502 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
TOP3B-210ENST00000444502 NLRP13Q86W25 1043 aa13.82□□□□□ -0.2
TOP3B-210ENST00000444502 NCOA1Q15788 1441 aa13.82□□□□□ -0.2
TOP3B-210ENST00000444502 ARXQ96QS3 562 aa13.81□□□□□ -0.2
TOP3B-210ENST00000444502 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
TOP3B-210ENST00000444502 MAGI1Q96QZ7 1491 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-210ENST00000444502 NUP153P49790 1475 aaKnown RBP13.81□□□□□ -0.2
TOP3B-210ENST00000444502 MAPK8IP3Q9UPT6 1336 aa13.81□□□□□ -0.2
TOP3B-210ENST00000444502 ZBED9Q6R2W3 1325 aa13.81□□□□□ -0.2
TOP3B-210ENST00000444502 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-210ENST00000444502 AKNAQ7Z591 1439 aa13.79□□□□□ -0.2
TOP3B-210ENST00000444502 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
TOP3B-210ENST00000444502 MYBBP1AQ9BQG0 1328 aaKnown RBP13.79□□□□□ -0.2
TOP3B-210ENST00000444502 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
TOP3B-210ENST00000444502 TMEM132EQ6IEE7 984 aa13.78□□□□□ -0.2
TOP3B-210ENST00000444502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.78□□□□□ -0.2
TOP3B-210ENST00000444502 RCAN3Q9UKA8 241 aa13.78□□□□□ -0.2
TOP3B-210ENST00000444502 ABCA5Q8WWZ7 1642 aa13.78□□□□□ -0.2
TOP3B-210ENST00000444502 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.2
TOP3B-210ENST00000444502 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
TOP3B-210ENST00000444502 GPATCH8Q9UKJ3 1502 aaKnown RBP13.77□□□□□ -0.21
TOP3B-210ENST00000444502 PODXL2Q9NZ53 605 aa13.77□□□□□ -0.21
TOP3B-210ENST00000444502 ADAMTS12P58397 1594 aa13.77□□□□□ -0.21
TOP3B-210ENST00000444502 CCDC146Q8IYE0 955 aa13.76□□□□□ -0.21
TOP3B-210ENST00000444502 MAGI3Q5TCQ9 1506 aa13.76□□□□□ -0.21
TOP3B-210ENST00000444502 NGDNQ8NEJ9 315 aaKnown RBP13.75□□□□□ -0.21
TOP3B-210ENST00000444502 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
TOP3B-210ENST00000444502 U2AF1L5P0DN76 240 aaPredicted RBP13.74□□□□□ -0.21
TOP3B-210ENST00000444502 U2AF1Q01081 240 aaKnown RBP eCLIP13.74□□□□□ -0.21
TOP3B-210ENST00000444502 RPRD2Q5VT52 1461 aaKnown RBP13.73□□□□□ -0.21
TOP3B-210ENST00000444502 WDR62O43379 1518 aa13.73□□□□□ -0.21
TOP3B-210ENST00000444502 PLIN1O60240 522 aa13.72□□□□□ -0.21
TOP3B-210ENST00000444502 ATP10BO94823 1461 aa13.72□□□□□ -0.21
TOP3B-210ENST00000444502 DISP1Q96F81 1524 aa13.72□□□□□ -0.21
TOP3B-210ENST00000444502 CFAP70Q5T0N1 1121 aa13.72□□□□□ -0.21
TOP3B-210ENST00000444502 SAMD9Q5K651 1589 aa13.71□□□□□ -0.21
TOP3B-210ENST00000444502 RGS3P49796 1198 aa13.71□□□□□ -0.21
TOP3B-210ENST00000444502 RAPGEF6Q8TEU7 1601 aa13.71□□□□□ -0.21
TOP3B-210ENST00000444502 LTV1Q96GA3 475 aaPredicted RBP13.7□□□□□ -0.22
TOP3B-210ENST00000444502 TCOF1Q13428 1488 aaKnown RBP13.7□□□□□ -0.22
TOP3B-210ENST00000444502 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
TOP3B-210ENST00000444502 KIAA0556O60303 1618 aa13.69□□□□□ -0.22
TOP3B-210ENST00000444502 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
TOP3B-210ENST00000444502 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
TOP3B-210ENST00000444502 EXOC6Q8TAG9 804 aa13.68□□□□□ -0.22
TOP3B-210ENST00000444502 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
TOP3B-210ENST00000444502 CD109Q6YHK3 1445 aa13.68□□□□□ -0.22
TOP3B-210ENST00000444502 A0A0U1RQG5 324 aaPredicted RBP13.67□□□□□ -0.22
TOP3B-210ENST00000444502 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
TOP3B-210ENST00000444502 BRPF3Q9ULD4 1205 aa13.67□□□□□ -0.22
TOP3B-210ENST00000444502 CSB-PGBD3P0DP91 1061 aa13.66□□□□□ -0.22
TOP3B-210ENST00000444502 EIF4G3O43432 1585 aaKnown RBP13.66□□□□□ -0.22
TOP3B-210ENST00000444502 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
TOP3B-210ENST00000444502 PBRM1Q86U86 1689 aa13.65□□□□□ -0.22
TOP3B-210ENST00000444502 FTSJ3Q8IY81 847 aaKnown RBP13.65□□□□□ -0.22
TOP3B-210ENST00000444502 RRP7AQ9Y3A4 280 aaKnown RBP13.64□□□□□ -0.23
TOP3B-210ENST00000444502 KIF14Q15058 1648 aa13.64□□□□□ -0.23
TOP3B-210ENST00000444502 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
TOP3B-210ENST00000444502 RRP1P56182 461 aaKnown RBP13.63□□□□□ -0.23
TOP3B-210ENST00000444502 PLEKHH2Q8IVE3 1493 aa13.63□□□□□ -0.23
TOP3B-210ENST00000444502 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
TOP3B-210ENST00000444502 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
TOP3B-210ENST00000444502 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
TOP3B-210ENST00000444502 TXNDC2Q86VQ3 553 aa13.62□□□□□ -0.23
TOP3B-210ENST00000444502 APAF1O14727 1248 aa13.62□□□□□ -0.23
TOP3B-210ENST00000444502 NAP1L5Q96NT1 182 aaPredicted RBP13.62□□□□□ -0.23
TOP3B-210ENST00000444502 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
TOP3B-210ENST00000444502 EVC2Q86UK5 1308 aa13.61□□□□□ -0.23
TOP3B-210ENST00000444502 MYH16Q9H6N6 1097 aa13.61□□□□□ -0.23
TOP3B-210ENST00000444502 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
TOP3B-210ENST00000444502 AMPHP49418 695 aa13.6□□□□□ -0.23
TOP3B-210ENST00000444502 CEBPAP49715 358 aaPredicted RBP13.6□□□□□ -0.23
TOP3B-210ENST00000444502 BRD4O60885 1362 aaPredicted RBP13.6□□□□□ -0.23
TOP3B-210ENST00000444502 IPO9Q96P70 1041 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms