RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 MROH1Q8NDA8 1641 aa25.75■■□□□ 1.71
TARDBP-203ENST00000439080 MROH2AA6NES4 1674 aa25.73■■□□□ 1.71
TARDBP-203ENST00000439080 PTPRMP28827 1452 aa25.72■■□□□ 1.71
TARDBP-203ENST00000439080 PRDM15P57071 1507 aaPredicted RBP25.71■■□□□ 1.71
TARDBP-203ENST00000439080 ZC3H13Q5T200 1668 aaKnown RBP25.71■■□□□ 1.71
TARDBP-203ENST00000439080 KIF3BO15066 747 aa25.7■■□□□ 1.71
TARDBP-203ENST00000439080 FAM135AQ9P2D6 1515 aa25.7■■□□□ 1.7
TARDBP-203ENST00000439080 C3P01024 1663 aa25.7■■□□□ 1.7
TARDBP-203ENST00000439080 KDM5DQ9BY66 1539 aa25.69■■□□□ 1.7
TARDBP-203ENST00000439080 CEP152O94986 1710 aa25.68■■□□□ 1.7
TARDBP-203ENST00000439080 ANKRD50Q9ULJ7 1429 aa25.68■■□□□ 1.7
TARDBP-203ENST00000439080 GGT6Q6P531 493 aa25.67■■□□□ 1.7
TARDBP-203ENST00000439080 CNTLNQ9NXG0 1405 aa25.66■■□□□ 1.7
TARDBP-203ENST00000439080 UNC13BO14795 1591 aa25.64■■□□□ 1.7
TARDBP-203ENST00000439080 ABCC3O15438 1527 aa25.62■■□□□ 1.69
TARDBP-203ENST00000439080 ESF1Q9H501 851 aaKnown RBP25.61■■□□□ 1.69
TARDBP-203ENST00000439080 CAMSAP1Q5T5Y3 1602 aa25.61■■□□□ 1.69
TARDBP-203ENST00000439080 HFM1A2PYH4 1435 aa25.6■■□□□ 1.69
TARDBP-203ENST00000439080 NAIPQ13075 1403 aa25.6■■□□□ 1.69
TARDBP-203ENST00000439080 VWDEQ8N2E2 1590 aa25.58■■□□□ 1.69
TARDBP-203ENST00000439080 PPP6R1Q9UPN7 881 aa25.57■■□□□ 1.68
TARDBP-203ENST00000439080 PLPPR3Q6T4P5 718 aa25.54■■□□□ 1.68
TARDBP-203ENST00000439080 IQGAP3Q86VI3 1631 aa25.53■■□□□ 1.68
TARDBP-203ENST00000439080 WASHC2CQ9Y4E1 1318 aa25.53■■□□□ 1.68
TARDBP-203ENST00000439080 PREX1Q8TCU6 1659 aa25.52■■□□□ 1.68
TARDBP-203ENST00000439080 LMTK2Q8IWU2 1503 aa25.51■■□□□ 1.67
TARDBP-203ENST00000439080 ZMYM3Q14202 1370 aa25.51■■□□□ 1.67
TARDBP-203ENST00000439080 KANK1Q14678 1352 aa25.51■■□□□ 1.67
TARDBP-203ENST00000439080 PZPP20742 1482 aa25.5■■□□□ 1.67
TARDBP-203ENST00000439080 TET3O43151 1660 aa25.49■■□□□ 1.67
TARDBP-203ENST00000439080 CEBPAP49715 358 aaPredicted RBP25.49■■□□□ 1.67
TARDBP-203ENST00000439080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.49■■□□□ 1.672e-9■■□□□ 13.4
TARDBP-203ENST00000439080 EFCAB6Q5THR3 1501 aa25.49■■□□□ 1.67
TARDBP-203ENST00000439080 MYO3AQ8NEV4 1616 aa25.46■■□□□ 1.67
TARDBP-203ENST00000439080 NPATQ14207 1427 aa25.45■■□□□ 1.66
TARDBP-203ENST00000439080 CFAP65Q6ZU64 1925 aaKnown RBP25.44■■□□□ 1.66
TARDBP-203ENST00000439080 SETD1BQ9UPS6 1966 aaKnown RBP25.43■■□□□ 1.66
TARDBP-203ENST00000439080 E9PCH4 1651 aa25.41■■□□□ 1.66
TARDBP-203ENST00000439080 SPATA31D1Q6ZQQ2 1576 aa25.41■■□□□ 1.66
TARDBP-203ENST00000439080 ARHGAP31Q2M1Z3 1444 aa25.4■■□□□ 1.66
TARDBP-203ENST00000439080 ZNF142P52746 1687 aaPredicted RBP25.4■■□□□ 1.66
TARDBP-203ENST00000439080 ERVK-7P63135 1459 aa25.38■■□□□ 1.65
TARDBP-203ENST00000439080 LMTK3Q96Q04 1460 aa25.38■■□□□ 1.65
TARDBP-203ENST00000439080 NUP155O75694 1391 aa25.38■■□□□ 1.65
TARDBP-203ENST00000439080 SETD5Q9C0A6 1442 aa25.38■■□□□ 1.65
TARDBP-203ENST00000439080 UHRF1BP1Q6BDS2 1440 aa25.35■■□□□ 1.65
TARDBP-203ENST00000439080 RPRD2Q5VT52 1461 aaKnown RBP25.34■■□□□ 1.65
TARDBP-203ENST00000439080 CEP170BQ9Y4F5 1589 aaPredicted RBP25.33■■□□□ 1.65
TARDBP-203ENST00000439080 FBXO31Q5XUX0 539 aaPredicted RBP25.32■■□□□ 1.64
TARDBP-203ENST00000439080 TNRQ92752 1358 aa25.32■■□□□ 1.64
TARDBP-203ENST00000439080 RAB3GAP2Q9H2M9 1393 aa25.32■■□□□ 1.64
TARDBP-203ENST00000439080 SYNMO15061 1565 aa25.31■■□□□ 1.64
TARDBP-203ENST00000439080 SPHKAPQ2M3C7 1700 aa25.3■■□□□ 1.64
TARDBP-203ENST00000439080 TRIM52Q96A61 297 aa25.27■■□□□ 1.64
TARDBP-203ENST00000439080 NLRP1Q9C000 1473 aa25.26■■□□□ 1.63
TARDBP-203ENST00000439080 NOS1P29475 1434 aa25.26■■□□□ 1.63
TARDBP-203ENST00000439080 A2ML1A8K2U0 1454 aa25.25■■□□□ 1.63
TARDBP-203ENST00000439080 TRIM26Q12899 539 aaPredicted RBP25.24■■□□□ 1.63
TARDBP-203ENST00000439080 PIK3C2BO00750 1634 aa25.24■■□□□ 1.63
TARDBP-203ENST00000439080 UBR1Q8IWV7 1749 aa25.23■■□□□ 1.63
TARDBP-203ENST00000439080 UGGT1Q9NYU2 1555 aa25.19■■□□□ 1.62
TARDBP-203ENST00000439080 KDM5AP29375 1690 aaKnown RBP25.19■■□□□ 1.62
TARDBP-203ENST00000439080 ACIN1Q9UKV3 1341 aaKnown RBP25.18■■□□□ 1.62
TARDBP-203ENST00000439080 TRPM2O94759 1503 aa25.17■■□□□ 1.62
TARDBP-203ENST00000439080 SLC4A1APQ9BWU0 796 aaKnown RBP25.17■■□□□ 1.62
TARDBP-203ENST00000439080 MYO5BQ9ULV0 1848 aa25.16■■□□□ 1.62
TARDBP-203ENST00000439080 ADGRB3O60242 1522 aa25.16■■□□□ 1.62
TARDBP-203ENST00000439080 HSPA2P54652 639 aa25.16■■□□□ 1.62
TARDBP-203ENST00000439080 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
TARDBP-203ENST00000439080 STRCQ7RTU9 1775 aa25.14■■□□□ 1.62
TARDBP-203ENST00000439080 PTPRTO14522 1441 aa25.13■■□□□ 1.61
TARDBP-203ENST00000439080 CLTCL1P53675 1640 aa25.13■■□□□ 1.61
TARDBP-203ENST00000439080 PKD2Q13563 968 aa25.12■■□□□ 1.61
TARDBP-203ENST00000439080 PLA2R1Q13018 1463 aa25.1■■□□□ 1.61
TARDBP-203ENST00000439080 HRCP23327 699 aa25.1■■□□□ 1.61
TARDBP-203ENST00000439080 MPHOSPH9Q99550 1183 aa25.1■■□□□ 1.61
TARDBP-203ENST00000439080 TMEM131LA2VDJ0 1609 aa25.09■■□□□ 1.61
TARDBP-203ENST00000439080 KIF1BO60333 1816 aa25.08■■□□□ 1.6
TARDBP-203ENST00000439080 SLC52A1Q9NWF4 448 aa25.06■■□□□ 1.6
TARDBP-203ENST00000439080 IDI1Q13907 227 aa25.05■■□□□ 1.6
TARDBP-203ENST00000439080 FOXD1Q16676 465 aa25.04■■□□□ 1.6
TARDBP-203ENST00000439080 SLIT1O75093 1534 aa25.03■■□□□ 1.6
TARDBP-203ENST00000439080 NEURL4Q96JN8 1562 aa25.03■■□□□ 1.6
TARDBP-203ENST00000439080 ARHGAP23Q9P227 1491 aa25.01■■□□□ 1.59
TARDBP-203ENST00000439080 THEMISQ8N1K5 641 aaPredicted RBP25■■□□□ 1.59
TARDBP-203ENST00000439080 STAG3Q9UJ98 1225 aa24.99■■□□□ 1.59
TARDBP-203ENST00000439080 IQGAP1P46940 1657 aa24.97■■□□□ 1.59
TARDBP-203ENST00000439080 CCDC144AA2RUR9 1427 aa24.96■■□□□ 1.59
TARDBP-203ENST00000439080 TMEM2Q9UHN6 1383 aa24.95■■□□□ 1.59
TARDBP-203ENST00000439080 SCAF11Q99590 1463 aaKnown RBP24.94■■□□□ 1.58
TARDBP-203ENST00000439080 NCKAP5LQ9HCH0 1330 aa24.93■■□□□ 1.58
TARDBP-203ENST00000439080 CHGAP10645 457 aaKnown RBP24.93■■□□□ 1.58
TARDBP-203ENST00000439080 PCGF6Q9BYE7 350 aa24.92■■□□□ 1.58
TARDBP-203ENST00000439080 ZFYVE9O95405 1425 aa24.91■■□□□ 1.58
TARDBP-203ENST00000439080 MED14O60244 1454 aa24.9■■□□□ 1.58
TARDBP-203ENST00000439080 RIMS2Q9UQ26 1411 aa24.89■■□□□ 1.58
TARDBP-203ENST00000439080 ANKLE2Q86XL3 938 aa24.89■■□□□ 1.57
TARDBP-203ENST00000439080 NEXMIFQ5QGS0 1516 aa24.89■■□□□ 1.57
TARDBP-203ENST00000439080 PPLO60437 1756 aa24.88■■□□□ 1.57
TARDBP-203ENST00000439080 ANKRD30BQ9BXX2 1392 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms