RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 MROH2AA6NES4 1674 aa28.29■■■□□ 2.12
DDR1-236ENST00000431373 CLTCQ00610 1675 aaKnown RBP28.29■■■□□ 2.12
DDR1-236ENST00000431373 CNTLNQ9NXG0 1405 aa28.29■■■□□ 2.12
DDR1-236ENST00000431373 ROCK1Q13464 1354 aa28.29■■■□□ 2.12
DDR1-236ENST00000431373 PPP6R1Q9UPN7 881 aa28.27■■■□□ 2.12
DDR1-236ENST00000431373 C3P01024 1663 aa28.26■■■□□ 2.11
DDR1-236ENST00000431373 FAM135AQ9P2D6 1515 aa28.25■■■□□ 2.11
DDR1-236ENST00000431373 MROH1Q8NDA8 1641 aa28.23■■■□□ 2.11
DDR1-236ENST00000431373 KDM5DQ9BY66 1539 aa28.23■■■□□ 2.11
DDR1-236ENST00000431373 DEPDC5O75140 1603 aa28.21■■■□□ 2.11
DDR1-236ENST00000431373 ANKRD50Q9ULJ7 1429 aa28.2■■■□□ 2.11
DDR1-236ENST00000431373 PLPPR3Q6T4P5 718 aa28.2■■■□□ 2.1
DDR1-236ENST00000431373 ZC3H13Q5T200 1668 aaKnown RBP28.19■■■□□ 2.1
DDR1-236ENST00000431373 PRDM15P57071 1507 aaPredicted RBP28.19■■■□□ 2.1
DDR1-236ENST00000431373 CEP152O94986 1710 aa28.16■■■□□ 2.1
DDR1-236ENST00000431373 CEBPAP49715 358 aaPredicted RBP28.16■■■□□ 2.1
DDR1-236ENST00000431373 WASHC2CQ9Y4E1 1318 aa28.16■■■□□ 2.1
DDR1-236ENST00000431373 ZMYM3Q14202 1370 aa28.15■■■□□ 2.1
DDR1-236ENST00000431373 ABCC3O15438 1527 aa28.14■■■□□ 2.1
DDR1-236ENST00000431373 GCC2Q8IWJ2 1684 aa28.14■■■□□ 2.1
DDR1-236ENST00000431373 SETD1BQ9UPS6 1966 aaKnown RBP28.11■■■□□ 2.09
DDR1-236ENST00000431373 KANK1Q14678 1352 aa28.1■■■□□ 2.09
DDR1-236ENST00000431373 UNC13BO14795 1591 aa28.09■■■□□ 2.09
DDR1-236ENST00000431373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.09■■■□□ 2.09
DDR1-236ENST00000431373 CAMSAP1Q5T5Y3 1602 aa28.09■■■□□ 2.09
DDR1-236ENST00000431373 VWDEQ8N2E2 1590 aa28.07■■■□□ 2.08
DDR1-236ENST00000431373 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
DDR1-236ENST00000431373 NAIPQ13075 1403 aa28.07■■■□□ 2.08
DDR1-236ENST00000431373 NPATQ14207 1427 aa28.06■■■□□ 2.08
DDR1-236ENST00000431373 HFM1A2PYH4 1435 aa28.05■■■□□ 2.08
DDR1-236ENST00000431373 PZPP20742 1482 aa28.05■■■□□ 2.08
DDR1-236ENST00000431373 LMTK2Q8IWU2 1503 aa28.02■■■□□ 2.08
DDR1-236ENST00000431373 CFAP65Q6ZU64 1925 aaKnown RBP28■■■□□ 2.07
DDR1-236ENST00000431373 LMTK3Q96Q04 1460 aa27.99■■■□□ 2.07
DDR1-236ENST00000431373 IQGAP3Q86VI3 1631 aa27.98■■■□□ 2.07
DDR1-236ENST00000431373 UHRF1BP1Q6BDS2 1440 aa27.97■■■□□ 2.07
DDR1-236ENST00000431373 ARHGAP31Q2M1Z3 1444 aa27.96■■■□□ 2.07
DDR1-236ENST00000431373 TET3O43151 1660 aa27.96■■■□□ 2.07
DDR1-236ENST00000431373 EFCAB6Q5THR3 1501 aa27.95■■■□□ 2.06
DDR1-236ENST00000431373 MYO3AQ8NEV4 1616 aa27.95■■■□□ 2.06
DDR1-236ENST00000431373 FBXO31Q5XUX0 539 aaPredicted RBP27.94■■■□□ 2.06
DDR1-236ENST00000431373 SPATA31D1Q6ZQQ2 1576 aa27.93■■■□□ 2.06
DDR1-236ENST00000431373 ERVK-7P63135 1459 aa27.91■■■□□ 2.06
DDR1-236ENST00000431373 NUP155O75694 1391 aa27.91■■■□□ 2.06
DDR1-236ENST00000431373 TNRQ92752 1358 aa27.91■■■□□ 2.06
DDR1-236ENST00000431373 ZNF142P52746 1687 aaPredicted RBP27.91■■■□□ 2.06
DDR1-236ENST00000431373 CEP170BQ9Y4F5 1589 aaPredicted RBP27.86■■■□□ 2.05
DDR1-236ENST00000431373 E9PCH4 1651 aa27.85■■■□□ 2.05
DDR1-236ENST00000431373 RPRD2Q5VT52 1461 aaKnown RBP27.85■■■□□ 2.05
DDR1-236ENST00000431373 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
DDR1-236ENST00000431373 NLRP1Q9C000 1473 aa27.83■■■□□ 2.04
DDR1-236ENST00000431373 HSPA2P54652 639 aa27.82■■■□□ 2.04
DDR1-236ENST00000431373 A2ML1A8K2U0 1454 aa27.82■■■□□ 2.04
DDR1-236ENST00000431373 TRIM52Q96A61 297 aa27.8■■■□□ 2.04
DDR1-236ENST00000431373 NOS1P29475 1434 aa27.78■■■□□ 2.04
DDR1-236ENST00000431373 SYNMO15061 1565 aa27.77■■■□□ 2.04
DDR1-236ENST00000431373 ACIN1Q9UKV3 1341 aaKnown RBP27.74■■■□□ 2.03
DDR1-236ENST00000431373 RAB3GAP2Q9H2M9 1393 aa27.73■■■□□ 2.03
DDR1-236ENST00000431373 ILDR1Q86SU0 546 aaPredicted RBP27.73■■■□□ 2.03
DDR1-236ENST00000431373 UGGT1Q9NYU2 1555 aa27.73■■■□□ 2.03
DDR1-236ENST00000431373 PIK3C2BO00750 1634 aa27.71■■■□□ 2.03
DDR1-236ENST00000431373 SPHKAPQ2M3C7 1700 aa27.71■■■□□ 2.03
DDR1-236ENST00000431373 STRCQ7RTU9 1775 aa27.71■■■□□ 2.03
DDR1-236ENST00000431373 UBR1Q8IWV7 1749 aa27.7■■■□□ 2.03
DDR1-236ENST00000431373 SLC4A1APQ9BWU0 796 aaKnown RBP27.68■■■□□ 2.02
DDR1-236ENST00000431373 PLA2R1Q13018 1463 aa27.67■■■□□ 2.02
DDR1-236ENST00000431373 KDM5AP29375 1690 aaKnown RBP27.67■■■□□ 2.02
DDR1-236ENST00000431373 THEMISQ8N1K5 641 aaPredicted RBP27.65■■■□□ 2.02
DDR1-236ENST00000431373 SLC52A1Q9NWF4 448 aa27.65■■■□□ 2.02
DDR1-236ENST00000431373 PKD2Q13563 968 aa27.64■■■□□ 2.02
DDR1-236ENST00000431373 IDI1Q13907 227 aa27.63■■■□□ 2.01
DDR1-236ENST00000431373 POLR1AO95602 1720 aaPredicted RBP27.62■■■□□ 2.01
DDR1-236ENST00000431373 PTPRTO14522 1441 aa27.62■■■□□ 2.01
DDR1-236ENST00000431373 HRCP23327 699 aa27.62■■■□□ 2.01
DDR1-236ENST00000431373 TRIM26Q12899 539 aaPredicted RBP27.62■■■□□ 2.01
DDR1-236ENST00000431373 ADGRB3O60242 1522 aa27.62■■■□□ 2.01
DDR1-236ENST00000431373 MPHOSPH9Q99550 1183 aa27.6■■■□□ 2.01
DDR1-236ENST00000431373 MYO5BQ9ULV0 1848 aa27.6■■■□□ 2.01
DDR1-236ENST00000431373 TRPM2O94759 1503 aa27.59■■■□□ 2.01
DDR1-236ENST00000431373 STAG3Q9UJ98 1225 aa27.59■■■□□ 2.01
DDR1-236ENST00000431373 TMEM131LA2VDJ0 1609 aa27.56■■■□□ 2
DDR1-236ENST00000431373 NCKAP5LQ9HCH0 1330 aa27.55■■■□□ 2
DDR1-236ENST00000431373 CLTCL1P53675 1640 aa27.55■■■□□ 2
DDR1-236ENST00000431373 SLIT1O75093 1534 aa27.54■■■□□ 2
DDR1-236ENST00000431373 ARHGAP23Q9P227 1491 aa27.53■■■□□ 2
DDR1-236ENST00000431373 DMRT2Q9Y5R5 561 aa27.53■■■□□ 2
DDR1-236ENST00000431373 KIF1BO60333 1816 aa27.51■■□□□ 1.99
DDR1-236ENST00000431373 FOXD1Q16676 465 aa27.51■■□□□ 1.99
DDR1-236ENST00000431373 ANKLE2Q86XL3 938 aa27.51■■□□□ 1.99
DDR1-236ENST00000431373 NEURL4Q96JN8 1562 aa27.51■■□□□ 1.99
DDR1-236ENST00000431373 TMEM2Q9UHN6 1383 aa27.49■■□□□ 1.99
DDR1-236ENST00000431373 CHGAP10645 457 aaKnown RBP27.48■■□□□ 1.99
DDR1-236ENST00000431373 SCAF11Q99590 1463 aaKnown RBP27.46■■□□□ 1.99
DDR1-236ENST00000431373 MED14O60244 1454 aa27.44■■□□□ 1.98
DDR1-236ENST00000431373 EID1Q9Y6B2 187 aa27.44■■□□□ 1.98
DDR1-236ENST00000431373 IQGAP1P46940 1657 aa27.43■■□□□ 1.98
DDR1-236ENST00000431373 TXNDC2Q86VQ3 553 aa27.42■■□□□ 1.98
DDR1-236ENST00000431373 NPHP4O75161 1426 aaPredicted RBP27.41■■□□□ 1.98
DDR1-236ENST00000431373 LTKP29376 864 aa27.41■■□□□ 1.98
DDR1-236ENST00000431373 CCDC144AA2RUR9 1427 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms