RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 NISCHQ9Y2I1 1504 aa44.87■■■■■ 4.77
DDR1-236ENST00000431373 CCDC180Q9P1Z9 1646 aa39.88■■■■□ 3.97
DDR1-236ENST00000431373 ABCC9O60706 1549 aa38.76■■■■□ 3.8
DDR1-236ENST00000431373 ZCCHC6Q5VYS8 1495 aaKnown RBP37.42■■■■□ 3.58
DDR1-236ENST00000431373 RB1CC1Q8TDY2 1594 aa37.42■■■■□ 3.58
DDR1-236ENST00000431373 NACADO15069 1562 aa37.41■■■■□ 3.58
DDR1-236ENST00000431373 DCAF8L2P0C7V8 631 aa37.36■■■■□ 3.57
DDR1-236ENST00000431373 MYO15BQ96JP2 1530 aa37.23■■■■□ 3.55
DDR1-236ENST00000431373 DCAF1Q9Y4B6 1507 aa37.15■■■■□ 3.54
DDR1-236ENST00000431373 UNC13AQ9UPW8 1703 aa36.64■■■■□ 3.46
DDR1-236ENST00000431373 SCRIBQ14160 1630 aa36.37■■■■□ 3.41
DDR1-236ENST00000431373 BICRAQ9NZM4 1560 aa36.26■■■■□ 3.39
DDR1-236ENST00000431373 PABPN1Q86U42 306 aaKnown RBP eCLIP36.21■■■■□ 3.39
DDR1-236ENST00000431373 SHROOM4Q9ULL8 1493 aa35.9■■■■□ 3.34
DDR1-236ENST00000431373 DNAJC5BQ9UF47 199 aa35.34■■■■□ 3.25
DDR1-236ENST00000431373 EIF4G1Q04637 1599 aaKnown RBP35.29■■■■□ 3.24
DDR1-236ENST00000431373 CC2D2AQ9P2K1 1620 aa35.1■■■■□ 3.21
DDR1-236ENST00000431373 CECR2Q9BXF3 1484 aa34.91■■■■□ 3.18
DDR1-236ENST00000431373 SMARCA4P51532 1647 aa34.81■■■■□ 3.16
DDR1-236ENST00000431373 BAZ1AQ9NRL2 1556 aaPredicted RBP34.79■■■■□ 3.16
DDR1-236ENST00000431373 MROH2BQ7Z745 1585 aa34.58■■■■□ 3.13
DDR1-236ENST00000431373 SMARCA2P51531 1590 aa34.53■■■■□ 3.12
DDR1-236ENST00000431373 ATAD2BQ9ULI0 1458 aa34.52■■■■□ 3.12
DDR1-236ENST00000431373 NCAPD3P42695 1498 aa34.47■■■■□ 3.11
DDR1-236ENST00000431373 PEG3Q9GZU2 1588 aa34.45■■■■□ 3.11
DDR1-236ENST00000431373 HMGXB3Q12766 1538 aa34.36■■■■□ 3.09
DDR1-236ENST00000431373 BAZ1BQ9UIG0 1483 aaKnown RBP34.27■■■■□ 3.08
DDR1-236ENST00000431373 WIZO95785 1651 aa34.25■■■■□ 3.07
DDR1-236ENST00000431373 RSF1Q96T23 1441 aaPredicted RBP34.23■■■■□ 3.07
DDR1-236ENST00000431373 TOP2AP11388 1531 aaKnown RBP33.89■■■■□ 3.02
DDR1-236ENST00000431373 NESP48681 1621 aa33.6■■■□□ 2.97
DDR1-236ENST00000431373 LAMC3Q9Y6N6 1575 aa33.59■■■□□ 2.97
DDR1-236ENST00000431373 SUPT5HO00267 1087 aaKnown RBP33.49■■■□□ 2.95
DDR1-236ENST00000431373 CADPSQ9ULU8 1353 aa33.47■■■□□ 2.95
DDR1-236ENST00000431373 CCDC88BA6NC98 1476 aa33.45■■■□□ 2.95
DDR1-236ENST00000431373 ERCC6Q03468 1493 aa33.41■■■□□ 2.94
DDR1-236ENST00000431373 CFTRP13569 1480 aa33.33■■■□□ 2.93
DDR1-236ENST00000431373 PDS5BQ9NTI5 1447 aa33.31■■■□□ 2.92
DDR1-236ENST00000431373 KIF21AQ7Z4S6 1674 aa33.29■■■□□ 2.92
DDR1-236ENST00000431373 PRDM2Q13029 1718 aa33.22■■■□□ 2.91
DDR1-236ENST00000431373 FANCD2Q9BXW9 1451 aa33.12■■■□□ 2.89
DDR1-236ENST00000431373 THOC2Q8NI27 1593 aaKnown RBP33.09■■■□□ 2.89
DDR1-236ENST00000431373 CEP164Q9UPV0 1460 aa33.06■■■□□ 2.88
DDR1-236ENST00000431373 CUX2O14529 1486 aa32.99■■■□□ 2.87
DDR1-236ENST00000431373 MRC2Q9UBG0 1479 aa32.98■■■□□ 2.87
DDR1-236ENST00000431373 WDR62O43379 1518 aa32.87■■■□□ 2.85
DDR1-236ENST00000431373 URB2Q14146 1524 aaKnown RBP32.77■■■□□ 2.84
DDR1-236ENST00000431373 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
DDR1-236ENST00000431373 DNMBPQ6XZF7 1577 aa32.62■■■□□ 2.81
DDR1-236ENST00000431373 TOPBP1Q92547 1522 aa32.61■■■□□ 2.81
DDR1-236ENST00000431373 CUX1P39880 1505 aa32.44■■■□□ 2.78
DDR1-236ENST00000431373 IFT140Q96RY7 1462 aa32.35■■■□□ 2.77
DDR1-236ENST00000431373 POLA1P09884 1462 aaPredicted RBP32.34■■■□□ 2.77
DDR1-236ENST00000431373 FGD5Q6ZNL6 1462 aa32.29■■■□□ 2.76
DDR1-236ENST00000431373 WRNQ14191 1432 aaPredicted RBP eCLIP32.28■■■□□ 2.76
DDR1-236ENST00000431373 TARBP1Q13395 1621 aaKnown RBP32.27■■■□□ 2.76
DDR1-236ENST00000431373 BIVM-ERCC5R4GMW8 1640 aa32.26■■■□□ 2.75
DDR1-236ENST00000431373 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
DDR1-236ENST00000431373 TOP2BQ02880 1626 aa32.23■■■□□ 2.75
DDR1-236ENST00000431373 SYNJ1O43426 1573 aa32.23■■■□□ 2.75
DDR1-236ENST00000431373 SOGA1O94964 1423 aa32.19■■■□□ 2.74
DDR1-236ENST00000431373 RAD54L2Q9Y4B4 1467 aa32.18■■■□□ 2.74
DDR1-236ENST00000431373 ZNF608Q9ULD9 1512 aaPredicted RBP32.17■■■□□ 2.74
DDR1-236ENST00000431373 EIF4G3O43432 1585 aaKnown RBP32.11■■■□□ 2.73
DDR1-236ENST00000431373 WDR97A6NE52 1622 aa32.08■■■□□ 2.73
DDR1-236ENST00000431373 AQRO60306 1485 aaKnown RBP eCLIP32.01■■■□□ 2.712e-7■■■■■ 32.9
DDR1-236ENST00000431373 ABCA10Q8WWZ4 1543 aa31.99■■■□□ 2.71
DDR1-236ENST00000431373 TDRD9Q8NDG6 1382 aaKnown RBP31.97■■■□□ 2.71
DDR1-236ENST00000431373 ABCA5Q8WWZ7 1642 aa31.88■■■□□ 2.69
DDR1-236ENST00000431373 PBRM1Q86U86 1689 aa31.85■■■□□ 2.69
DDR1-236ENST00000431373 GAPVD1Q14C86 1478 aa31.84■■■□□ 2.69
DDR1-236ENST00000431373 GRIN2BQ13224 1484 aa31.82■■■□□ 2.68
DDR1-236ENST00000431373 SNAPC4Q5SXM2 1469 aa31.75■■■□□ 2.67
DDR1-236ENST00000431373 MAGI1Q96QZ7 1491 aaPredicted RBP31.72■■■□□ 2.67
DDR1-236ENST00000431373 CHD1O14646 1710 aa31.71■■■□□ 2.67
DDR1-236ENST00000431373 ERICH3Q5RHP9 1530 aa31.63■■■□□ 2.65
DDR1-236ENST00000431373 TRIM41Q8WV44 630 aa31.62■■■□□ 2.65
DDR1-236ENST00000431373 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
DDR1-236ENST00000431373 KIF27Q86VH2 1401 aa31.59■■■□□ 2.65
DDR1-236ENST00000431373 SYNJ2O15056 1496 aa31.59■■■□□ 2.65
DDR1-236ENST00000431373 FBLN2P98095 1184 aa31.58■■■□□ 2.65
DDR1-236ENST00000431373 ADAMTS12P58397 1594 aa31.56■■■□□ 2.64
DDR1-236ENST00000431373 CHMP7Q8WUX9 453 aaPredicted RBP31.53■■■□□ 2.64
DDR1-236ENST00000431373 FHAD1B1AJZ9 1412 aa31.48■■■□□ 2.63
DDR1-236ENST00000431373 IGF1RP08069 1367 aa31.42■■■□□ 2.62
DDR1-236ENST00000431373 CUL7Q14999 1698 aa31.41■■■□□ 2.62
DDR1-236ENST00000431373 GRIN2AQ12879 1464 aa31.41■■■□□ 2.62
DDR1-236ENST00000431373 RUSC2Q8N2Y8 1516 aa31.36■■■□□ 2.61
DDR1-236ENST00000431373 CHIC1Q5VXU3 224 aa31.36■■■□□ 2.61
DDR1-236ENST00000431373 CLASP1Q7Z460 1538 aa31.31■■■□□ 2.6
DDR1-236ENST00000431373 CEP170Q5SW79 1584 aa31.26■■■□□ 2.6
DDR1-236ENST00000431373 NUP160Q12769 1436 aa31.25■■■□□ 2.59
DDR1-236ENST00000431373 CARMIL1Q5VZK9 1371 aa31.25■■■□□ 2.59
DDR1-236ENST00000431373 RIMBP3CA6NJZ7 1639 aa31.16■■■□□ 2.58
DDR1-236ENST00000431373 RIMBP3BA6NNM3 1639 aa31.16■■■□□ 2.58
DDR1-236ENST00000431373 RIMBP3Q9UFD9 1639 aa31.16■■■□□ 2.58
DDR1-236ENST00000431373 ARHGEF11O15085 1522 aa31.14■■■□□ 2.58
DDR1-236ENST00000431373 EEA1Q15075 1411 aa31.13■■■□□ 2.57
DDR1-236ENST00000431373 RAPGEF2Q9Y4G8 1499 aa31.11■■■□□ 2.57
DDR1-236ENST00000431373 SHROOM2Q13796 1616 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 498.9 ms