RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 PZPP20742 1482 aa14.01□□□□□ -0.17
ATP2C1-204ENST00000428331 DNMT1P26358 1616 aaKnown RBP14.01□□□□□ -0.17
ATP2C1-204ENST00000428331 PRG4Q92954 1404 aaPredicted RBP14□□□□□ -0.17
ATP2C1-204ENST00000428331 WDR62O43379 1518 aa14□□□□□ -0.17
ATP2C1-204ENST00000428331 RALGAPBQ86X10 1494 aa14□□□□□ -0.17
ATP2C1-204ENST00000428331 PANK3Q9H999 370 aa14□□□□□ -0.17
ATP2C1-204ENST00000428331 FAM161AQ3B820 660 aa14□□□□□ -0.17
ATP2C1-204ENST00000428331 CDCA8Q53HL2 280 aa14□□□□□ -0.17
ATP2C1-204ENST00000428331 CAMSAP2Q08AD1 1489 aa14□□□□□ -0.17
ATP2C1-204ENST00000428331 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
ATP2C1-204ENST00000428331 CARMIL2Q6F5E8 1435 aa13.99□□□□□ -0.17
ATP2C1-204ENST00000428331 NFKBIBQ15653 356 aa13.98□□□□□ -0.17
ATP2C1-204ENST00000428331 CCDC144AA2RUR9 1427 aa13.98□□□□□ -0.17
ATP2C1-204ENST00000428331 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
ATP2C1-204ENST00000428331 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
ATP2C1-204ENST00000428331 BECN1Q14457 450 aa13.98□□□□□ -0.17
ATP2C1-204ENST00000428331 SLC4A3P48751 1232 aa13.97□□□□□ -0.17
ATP2C1-204ENST00000428331 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
ATP2C1-204ENST00000428331 KIAA0586Q9BVV6 1533 aa13.97□□□□□ -0.17
ATP2C1-204ENST00000428331 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.175e-7■■■■■ 28.1
ATP2C1-204ENST00000428331 UHRF1BP1Q6BDS2 1440 aa13.96□□□□□ -0.17
ATP2C1-204ENST00000428331 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
ATP2C1-204ENST00000428331 KIF14Q15058 1648 aa13.94□□□□□ -0.18
ATP2C1-204ENST00000428331 C9orf84Q5VXU9 1444 aa13.94□□□□□ -0.18
ATP2C1-204ENST00000428331 NUP153P49790 1475 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-204ENST00000428331 PARD3Q8TEW0 1356 aa13.93□□□□□ -0.18
ATP2C1-204ENST00000428331 GPATCH8Q9UKJ3 1502 aaKnown RBP13.92□□□□□ -0.18
ATP2C1-204ENST00000428331 NBPF1Q3BBV0 1214 aa13.92□□□□□ -0.18
ATP2C1-204ENST00000428331 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.92□□□□□ -0.18
ATP2C1-204ENST00000428331 MBD5Q9P267 1494 aa13.92□□□□□ -0.18
ATP2C1-204ENST00000428331 ADAMTS8Q9UP79 889 aa13.92□□□□□ -0.18
ATP2C1-204ENST00000428331 ARHGEF12Q9NZN5 1544 aa13.92□□□□□ -0.18
ATP2C1-204ENST00000428331 JPH4Q96JJ6 628 aa13.92□□□□□ -0.18
ATP2C1-204ENST00000428331 POLR1AO95602 1720 aaPredicted RBP13.91□□□□□ -0.18
ATP2C1-204ENST00000428331 KDM5CP41229 1560 aa13.91□□□□□ -0.18
ATP2C1-204ENST00000428331 BRPF3Q9ULD4 1205 aa13.9□□□□□ -0.18
ATP2C1-204ENST00000428331 ADGRL2O95490 1459 aa13.9□□□□□ -0.18
ATP2C1-204ENST00000428331 PLEKHH2Q8IVE3 1493 aa13.9□□□□□ -0.18
ATP2C1-204ENST00000428331 FRAT1Q92837 279 aaPredicted RBP13.89□□□□□ -0.19
ATP2C1-204ENST00000428331 SKAP1Q86WV1 359 aa13.89□□□□□ -0.19
ATP2C1-204ENST00000428331 BCORL1Q5H9F3 1711 aa13.89□□□□□ -0.19
ATP2C1-204ENST00000428331 RAPGEF6Q8TEU7 1601 aa13.88□□□□□ -0.19
ATP2C1-204ENST00000428331 PER1O15534 1290 aaPredicted RBP13.87□□□□□ -0.19
ATP2C1-204ENST00000428331 C20orf194Q5TEA3 1177 aa13.87□□□□□ -0.19
ATP2C1-204ENST00000428331 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
ATP2C1-204ENST00000428331 ITSN2Q9NZM3 1697 aa13.87□□□□□ -0.19
ATP2C1-204ENST00000428331 INSRP06213 1382 aa13.85□□□□□ -0.19
ATP2C1-204ENST00000428331 SLC24A1O60721 1099 aa13.85□□□□□ -0.19
ATP2C1-204ENST00000428331 PLB1Q6P1J6 1458 aa13.85□□□□□ -0.19
ATP2C1-204ENST00000428331 ERBINQ96RT1 1412 aa13.84□□□□□ -0.19
ATP2C1-204ENST00000428331 KIAA0556O60303 1618 aa13.84□□□□□ -0.19
ATP2C1-204ENST00000428331 EIF3AQ14152 1382 aaKnown RBP13.84□□□□□ -0.19
ATP2C1-204ENST00000428331 PPP2R1AP30153 589 aa13.84□□□□□ -0.19
ATP2C1-204ENST00000428331 FRAT2O75474 233 aaPredicted RBP13.84□□□□□ -0.19
ATP2C1-204ENST00000428331 L1TD1Q5T7N2 865 aaKnown RBP13.84□□□□□ -0.19
ATP2C1-204ENST00000428331 IFT140Q96RY7 1462 aa13.84□□□□□ -0.19
ATP2C1-204ENST00000428331 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.19
ATP2C1-204ENST00000428331 MAPK8IP3Q9UPT6 1336 aa13.83□□□□□ -0.19
ATP2C1-204ENST00000428331 CCDC146Q8IYE0 955 aa13.83□□□□□ -0.2
ATP2C1-204ENST00000428331 CGNL1Q0VF96 1302 aa13.83□□□□□ -0.2
ATP2C1-204ENST00000428331 E9PSI1 815 aa13.83□□□□□ -0.2
ATP2C1-204ENST00000428331 DISP1Q96F81 1524 aa13.83□□□□□ -0.2
ATP2C1-204ENST00000428331 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
ATP2C1-204ENST00000428331 NGEFQ8N5V2 710 aa13.82□□□□□ -0.2
ATP2C1-204ENST00000428331 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
ATP2C1-204ENST00000428331 APAF1O14727 1248 aa13.82□□□□□ -0.2
ATP2C1-204ENST00000428331 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
ATP2C1-204ENST00000428331 ADGBQ8N7X0 1667 aa13.81□□□□□ -0.2
ATP2C1-204ENST00000428331 SLKQ9H2G2 1235 aaPredicted RBP13.81□□□□□ -0.2
ATP2C1-204ENST00000428331 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
ATP2C1-204ENST00000428331 PBRM1Q86U86 1689 aa13.8□□□□□ -0.2
ATP2C1-204ENST00000428331 DISP3Q9P2K9 1392 aa13.8□□□□□ -0.2
ATP2C1-204ENST00000428331 RSPH6AQ9H0K4 717 aa13.8□□□□□ -0.2
ATP2C1-204ENST00000428331 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
ATP2C1-204ENST00000428331 TESK2Q96S53 571 aa13.79□□□□□ -0.2
ATP2C1-204ENST00000428331 CENPJQ9HC77 1338 aaPredicted RBP13.79□□□□□ -0.2
ATP2C1-204ENST00000428331 SLFN5Q08AF3 891 aa13.79□□□□□ -0.2
ATP2C1-204ENST00000428331 KDM2BQ8NHM5 1336 aa13.79□□□□□ -0.2
ATP2C1-204ENST00000428331 BLMP54132 1417 aaPredicted RBP13.79□□□□□ -0.2
ATP2C1-204ENST00000428331 MAGI1Q96QZ7 1491 aaPredicted RBP13.79□□□□□ -0.2
ATP2C1-204ENST00000428331 PMFBP1Q8TBY8 1022 aa13.78□□□□□ -0.2
ATP2C1-204ENST00000428331 ARXQ96QS3 562 aa13.78□□□□□ -0.2
ATP2C1-204ENST00000428331 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
ATP2C1-204ENST00000428331 NEUROD2Q15784 382 aa13.78□□□□□ -0.2
ATP2C1-204ENST00000428331 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
ATP2C1-204ENST00000428331 PDE3AQ14432 1141 aa13.76□□□□□ -0.21
ATP2C1-204ENST00000428331 COL17A1Q9UMD9 1497 aaPredicted RBP13.76□□□□□ -0.21
ATP2C1-204ENST00000428331 ZNF608Q9ULD9 1512 aaPredicted RBP13.76□□□□□ -0.21
ATP2C1-204ENST00000428331 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
ATP2C1-204ENST00000428331 STAC3Q96MF2 364 aa13.76□□□□□ -0.21
ATP2C1-204ENST00000428331 CCDC141Q6ZP82 1450 aa13.76□□□□□ -0.21
ATP2C1-204ENST00000428331 CLUAP1Q96AJ1 413 aa13.75□□□□□ -0.21
ATP2C1-204ENST00000428331 COG6Q9Y2V7 657 aa13.75□□□□□ -0.21
ATP2C1-204ENST00000428331 ZMYM4Q5VZL5 1548 aa13.75□□□□□ -0.21
ATP2C1-204ENST00000428331 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
ATP2C1-204ENST00000428331 BCAR3O75815 825 aa13.74□□□□□ -0.21
ATP2C1-204ENST00000428331 GLIPR1L2Q4G1C9 344 aa13.74□□□□□ -0.21
ATP2C1-204ENST00000428331 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-204ENST00000428331 PTPRGP23470 1445 aa13.73□□□□□ -0.21
ATP2C1-204ENST00000428331 PLEKHH1Q9ULM0 1364 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms