RNA–Protein interactions for RNA: ENST00000428193.6

RPL28-203, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-203ENST00000428193 EIF2AK4Q9P2K8 1649 aaKnown RBP23.66■■□□□ 1.38
RPL28-203ENST00000428193 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
RPL28-203ENST00000428193 NPATQ14207 1427 aa23.66■■□□□ 1.38
RPL28-203ENST00000428193 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
RPL28-203ENST00000428193 DUOX2Q9NRD8 1548 aa23.65■■□□□ 1.38
RPL28-203ENST00000428193 RRP7BPQ9NSQ0 103 aa23.65■■□□□ 1.38
RPL28-203ENST00000428193 RNF17Q9BXT8 1623 aaKnown RBP23.65■■□□□ 1.38
RPL28-203ENST00000428193 WASHC2CQ9Y4E1 1318 aa23.64■■□□□ 1.38
RPL28-203ENST00000428193 MYO3AQ8NEV4 1616 aa23.63■■□□□ 1.37
RPL28-203ENST00000428193 PTPRKQ15262 1439 aa23.63■■□□□ 1.37
RPL28-203ENST00000428193 FAM135AQ9P2D6 1515 aa23.61■■□□□ 1.37
RPL28-203ENST00000428193 CEP152O94986 1710 aa23.59■■□□□ 1.37
RPL28-203ENST00000428193 STRCQ7RTU9 1775 aa23.59■■□□□ 1.37
RPL28-203ENST00000428193 ANKRD30AQ9BXX3 1397 aa23.58■■□□□ 1.37
RPL28-203ENST00000428193 MROH1Q8NDA8 1641 aa23.58■■□□□ 1.36
RPL28-203ENST00000428193 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
RPL28-203ENST00000428193 ABCC3O15438 1527 aa23.56■■□□□ 1.36
RPL28-203ENST00000428193 FBXO31Q5XUX0 539 aaPredicted RBP23.56■■□□□ 1.36
RPL28-203ENST00000428193 ZNF142P52746 1687 aaPredicted RBP23.56■■□□□ 1.36
RPL28-203ENST00000428193 ERBINQ96RT1 1412 aa23.56■■□□□ 1.36
RPL28-203ENST00000428193 PZPP20742 1482 aa23.56■■□□□ 1.36
RPL28-203ENST00000428193 CEP170BQ9Y4F5 1589 aaPredicted RBP23.55■■□□□ 1.36
RPL28-203ENST00000428193 CAMSAP1Q5T5Y3 1602 aa23.53■■□□□ 1.36
RPL28-203ENST00000428193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.53■■□□□ 1.36
RPL28-203ENST00000428193 NCOA1Q15788 1441 aa23.52■■□□□ 1.36
RPL28-203ENST00000428193 TNRQ92752 1358 aa23.52■■□□□ 1.36
RPL28-203ENST00000428193 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
RPL28-203ENST00000428193 PRDM15P57071 1507 aaPredicted RBP23.5■■□□□ 1.35
RPL28-203ENST00000428193 CFAP65Q6ZU64 1925 aaKnown RBP23.49■■□□□ 1.35
RPL28-203ENST00000428193 ITGAEP38570 1179 aa23.49■■□□□ 1.35
RPL28-203ENST00000428193 DEPDC5O75140 1603 aa23.48■■□□□ 1.35
RPL28-203ENST00000428193 A2ML1A8K2U0 1454 aa23.47■■□□□ 1.35
RPL28-203ENST00000428193 ILDR1Q86SU0 546 aaPredicted RBP23.46■■□□□ 1.35
RPL28-203ENST00000428193 DMRT2Q9Y5R5 561 aa23.46■■□□□ 1.35
RPL28-203ENST00000428193 KANK1Q14678 1352 aa23.45■■□□□ 1.34
RPL28-203ENST00000428193 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
RPL28-203ENST00000428193 ERVK-7P63135 1459 aa23.43■■□□□ 1.34
RPL28-203ENST00000428193 SPATA31D1Q6ZQQ2 1576 aa23.42■■□□□ 1.34
RPL28-203ENST00000428193 ANKRD50Q9ULJ7 1429 aa23.42■■□□□ 1.34
RPL28-203ENST00000428193 PTPRTO14522 1441 aa23.41■■□□□ 1.34
RPL28-203ENST00000428193 PLA2R1Q13018 1463 aa23.4■■□□□ 1.34
RPL28-203ENST00000428193 NLRP1Q9C000 1473 aa23.39■■□□□ 1.34
RPL28-203ENST00000428193 UGGT1Q9NYU2 1555 aa23.37■■□□□ 1.33
RPL28-203ENST00000428193 POLR1AO95602 1720 aaPredicted RBP23.36■■□□□ 1.33
RPL28-203ENST00000428193 VWDEQ8N2E2 1590 aa23.35■■□□□ 1.33
RPL28-203ENST00000428193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.35■■□□□ 1.33
RPL28-203ENST00000428193 ARHGAP31Q2M1Z3 1444 aa23.34■■□□□ 1.33
RPL28-203ENST00000428193 PKD2Q13563 968 aa23.34■■□□□ 1.33
RPL28-203ENST00000428193 ROCK1Q13464 1354 aa23.34■■□□□ 1.33
RPL28-203ENST00000428193 LMTK2Q8IWU2 1503 aa23.33■■□□□ 1.33
RPL28-203ENST00000428193 RRBP1Q9P2E9 1410 aaKnown RBP23.33■■□□□ 1.32
RPL28-203ENST00000428193 CERKQ8TCT0 537 aa23.32■■□□□ 1.32
RPL28-203ENST00000428193 THEMISQ8N1K5 641 aaPredicted RBP23.31■■□□□ 1.32
RPL28-203ENST00000428193 EFCAB6Q5THR3 1501 aa23.31■■□□□ 1.32
RPL28-203ENST00000428193 UNC13BO14795 1591 aa23.31■■□□□ 1.32
RPL28-203ENST00000428193 FBXO41Q8TF61 875 aa23.3■■□□□ 1.32
RPL28-203ENST00000428193 UBR1Q8IWV7 1749 aa23.29■■□□□ 1.32
RPL28-203ENST00000428193 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
RPL28-203ENST00000428193 TET3O43151 1660 aa23.26■■□□□ 1.31
RPL28-203ENST00000428193 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
RPL28-203ENST00000428193 ANKLE2Q86XL3 938 aa23.25■■□□□ 1.31
RPL28-203ENST00000428193 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
RPL28-203ENST00000428193 SYNMO15061 1565 aa23.24■■□□□ 1.31
RPL28-203ENST00000428193 LTBP4Q8N2S1 1624 aa23.23■■□□□ 1.31
RPL28-203ENST00000428193 ZNF335Q9H4Z2 1342 aaPredicted RBP23.23■■□□□ 1.31
RPL28-203ENST00000428193 STAG3Q9UJ98 1225 aa23.22■■□□□ 1.31
RPL28-203ENST00000428193 IQGAP3Q86VI3 1631 aa23.21■■□□□ 1.31
RPL28-203ENST00000428193 NPHP4O75161 1426 aaPredicted RBP23.19■■□□□ 1.3
RPL28-203ENST00000428193 NOS1P29475 1434 aa23.19■■□□□ 1.3
RPL28-203ENST00000428193 E9PCH4 1651 aa23.19■■□□□ 1.3
RPL28-203ENST00000428193 IQGAP1P46940 1657 aa23.19■■□□□ 1.3
RPL28-203ENST00000428193 RPRD2Q5VT52 1461 aaKnown RBP23.18■■□□□ 1.3
RPL28-203ENST00000428193 NUP155O75694 1391 aa23.18■■□□□ 1.3
RPL28-203ENST00000428193 IDI1Q13907 227 aa23.17■■□□□ 1.3
RPL28-203ENST00000428193 MED14O60244 1454 aa23.14■■□□□ 1.29
RPL28-203ENST00000428193 SCAF11Q99590 1463 aaKnown RBP23.14■■□□□ 1.29
RPL28-203ENST00000428193 NAIPQ13075 1403 aa23.14■■□□□ 1.29
RPL28-203ENST00000428193 ADGRB3O60242 1522 aa23.13■■□□□ 1.29
RPL28-203ENST00000428193 SLIT1O75093 1534 aa23.13■■□□□ 1.29
RPL28-203ENST00000428193 TXNDC2Q86VQ3 553 aa23.13■■□□□ 1.29
RPL28-203ENST00000428193 KDM5AP29375 1690 aaKnown RBP23.13■■□□□ 1.29
RPL28-203ENST00000428193 ARHGAP23Q9P227 1491 aa23.11■■□□□ 1.29
RPL28-203ENST00000428193 MYO5BQ9ULV0 1848 aa23.11■■□□□ 1.29
RPL28-203ENST00000428193 LTKP29376 864 aa23.1■■□□□ 1.29
RPL28-203ENST00000428193 SLC52A1Q9NWF4 448 aa23.1■■□□□ 1.29
RPL28-203ENST00000428193 EID1Q9Y6B2 187 aa23.1■■□□□ 1.29
RPL28-203ENST00000428193 TMEM2Q9UHN6 1383 aa23.09■■□□□ 1.29
RPL28-203ENST00000428193 CHGAP10645 457 aaKnown RBP23.07■■□□□ 1.28
RPL28-203ENST00000428193 IQSEC2Q5JU85 1478 aa23.06■■□□□ 1.28
RPL28-203ENST00000428193 HFM1A2PYH4 1435 aa23.06■■□□□ 1.28
RPL28-203ENST00000428193 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
RPL28-203ENST00000428193 CPS1P31327 1500 aa23.04■■□□□ 1.28
RPL28-203ENST00000428193 SPHKAPQ2M3C7 1700 aa23.04■■□□□ 1.28
RPL28-203ENST00000428193 TMEM131LA2VDJ0 1609 aa23.04■■□□□ 1.28
RPL28-203ENST00000428193 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
RPL28-203ENST00000428193 STRCP1A6NGW2 1772 aa23.02■■□□□ 1.28
RPL28-203ENST00000428193 BCANQ96GW7 911 aa22.99■■□□□ 1.27
RPL28-203ENST00000428193 UBAP1LF5GYI3 381 aa22.98■■□□□ 1.27
RPL28-203ENST00000428193 RIMS2Q9UQ26 1411 aa22.97■■□□□ 1.27
RPL28-203ENST00000428193 PPP1R15AO75807 674 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms