RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 ANKRD30AQ9BXX3 1397 aa26.5■■□□□ 1.83
LMCD1-204ENST00000426878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.5■■□□□ 1.83
LMCD1-204ENST00000426878 RNF17Q9BXT8 1623 aaKnown RBP26.49■■□□□ 1.83
LMCD1-204ENST00000426878 RRP7BPQ9NSQ0 103 aa26.49■■□□□ 1.83
LMCD1-204ENST00000426878 NCOA1Q15788 1441 aa26.49■■□□□ 1.83
LMCD1-204ENST00000426878 ADGRL2O95490 1459 aa26.49■■□□□ 1.83
LMCD1-204ENST00000426878 NPATQ14207 1427 aa26.48■■□□□ 1.83
LMCD1-204ENST00000426878 ERBINQ96RT1 1412 aa26.48■■□□□ 1.83
LMCD1-204ENST00000426878 PREX1Q8TCU6 1659 aa26.48■■□□□ 1.83
LMCD1-204ENST00000426878 CHIC2Q9UKJ5 165 aa26.47■■□□□ 1.83
LMCD1-204ENST00000426878 KDM5DQ9BY66 1539 aa26.46■■□□□ 1.83
LMCD1-204ENST00000426878 WASHC2CQ9Y4E1 1318 aa26.44■■□□□ 1.82
LMCD1-204ENST00000426878 UHRF1BP1Q6BDS2 1440 aa26.43■■□□□ 1.82
LMCD1-204ENST00000426878 PTPRKQ15262 1439 aa26.42■■□□□ 1.82
LMCD1-204ENST00000426878 MROH1Q8NDA8 1641 aa26.4■■□□□ 1.82
LMCD1-204ENST00000426878 RRBP1Q9P2E9 1410 aaKnown RBP26.39■■□□□ 1.82
LMCD1-204ENST00000426878 HSPA2P54652 639 aa26.38■■□□□ 1.81
LMCD1-204ENST00000426878 ZC3H13Q5T200 1668 aaKnown RBP26.37■■□□□ 1.81
LMCD1-204ENST00000426878 ABCC3O15438 1527 aa26.37■■□□□ 1.81
LMCD1-204ENST00000426878 ROCK1Q13464 1354 aa26.37■■□□□ 1.81
LMCD1-204ENST00000426878 PZPP20742 1482 aa26.36■■□□□ 1.81
LMCD1-204ENST00000426878 PRDM15P57071 1507 aaPredicted RBP26.35■■□□□ 1.81
LMCD1-204ENST00000426878 DEPDC5O75140 1603 aa26.35■■□□□ 1.81
LMCD1-204ENST00000426878 ANKRD50Q9ULJ7 1429 aa26.31■■□□□ 1.8
LMCD1-204ENST00000426878 FBXO31Q5XUX0 539 aaPredicted RBP26.29■■□□□ 1.8
LMCD1-204ENST00000426878 KANK1Q14678 1352 aa26.28■■□□□ 1.8
LMCD1-204ENST00000426878 MYO3AQ8NEV4 1616 aa26.27■■□□□ 1.8
LMCD1-204ENST00000426878 TNRQ92752 1358 aa26.27■■□□□ 1.8
LMCD1-204ENST00000426878 VWDEQ8N2E2 1590 aa26.26■■□□□ 1.79
LMCD1-204ENST00000426878 CEP152O94986 1710 aa26.26■■□□□ 1.79
LMCD1-204ENST00000426878 ZNF142P52746 1687 aaPredicted RBP26.26■■□□□ 1.79
LMCD1-204ENST00000426878 ITGAEP38570 1179 aa26.25■■□□□ 1.79
LMCD1-204ENST00000426878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.25■■□□□ 1.79
LMCD1-204ENST00000426878 ARHGAP31Q2M1Z3 1444 aa26.25■■□□□ 1.79
LMCD1-204ENST00000426878 CAMSAP1Q5T5Y3 1602 aa26.25■■□□□ 1.79
LMCD1-204ENST00000426878 LMTK2Q8IWU2 1503 aa26.24■■□□□ 1.79
LMCD1-204ENST00000426878 CEP170BQ9Y4F5 1589 aaPredicted RBP26.23■■□□□ 1.79
LMCD1-204ENST00000426878 SPATA31D1Q6ZQQ2 1576 aa26.21■■□□□ 1.79
LMCD1-204ENST00000426878 A2ML1A8K2U0 1454 aa26.21■■□□□ 1.79
LMCD1-204ENST00000426878 STRCQ7RTU9 1775 aa26.2■■□□□ 1.78
LMCD1-204ENST00000426878 ERVK-7P63135 1459 aa26.19■■□□□ 1.78
LMCD1-204ENST00000426878 NLRP1Q9C000 1473 aa26.19■■□□□ 1.78
LMCD1-204ENST00000426878 DMRT2Q9Y5R5 561 aa26.17■■□□□ 1.78
LMCD1-204ENST00000426878 UNC13BO14795 1591 aa26.15■■□□□ 1.78
LMCD1-204ENST00000426878 PLA2R1Q13018 1463 aa26.15■■□□□ 1.78
LMCD1-204ENST00000426878 CFAP65Q6ZU64 1925 aaKnown RBP26.12■■□□□ 1.77
LMCD1-204ENST00000426878 EFCAB6Q5THR3 1501 aa26.12■■□□□ 1.77
LMCD1-204ENST00000426878 PTPRTO14522 1441 aa26.1■■□□□ 1.77
LMCD1-204ENST00000426878 NAIPQ13075 1403 aa26.08■■□□□ 1.77
LMCD1-204ENST00000426878 THEMISQ8N1K5 641 aaPredicted RBP26.08■■□□□ 1.77
LMCD1-204ENST00000426878 RPRD2Q5VT52 1461 aaKnown RBP26.08■■□□□ 1.77
LMCD1-204ENST00000426878 PKD2Q13563 968 aa26.07■■□□□ 1.76
LMCD1-204ENST00000426878 TET3O43151 1660 aa26.07■■□□□ 1.76
LMCD1-204ENST00000426878 UGGT1Q9NYU2 1555 aa26.07■■□□□ 1.76
LMCD1-204ENST00000426878 IQGAP3Q86VI3 1631 aa26.05■■□□□ 1.76
LMCD1-204ENST00000426878 HFM1A2PYH4 1435 aa26.05■■□□□ 1.76
LMCD1-204ENST00000426878 NOS1P29475 1434 aa26.05■■□□□ 1.76
LMCD1-204ENST00000426878 GCC2Q8IWJ2 1684 aa26.04■■□□□ 1.76
LMCD1-204ENST00000426878 NCKAP5LQ9HCH0 1330 aa26.04■■□□□ 1.76
LMCD1-204ENST00000426878 NUP155O75694 1391 aa26.03■■□□□ 1.76
LMCD1-204ENST00000426878 SYNMO15061 1565 aa25.98■■□□□ 1.75
LMCD1-204ENST00000426878 UBR1Q8IWV7 1749 aa25.98■■□□□ 1.75
LMCD1-204ENST00000426878 SLC52A1Q9NWF4 448 aa25.97■■□□□ 1.75
LMCD1-204ENST00000426878 ANKLE2Q86XL3 938 aa25.97■■□□□ 1.75
LMCD1-204ENST00000426878 IDI1Q13907 227 aa25.96■■□□□ 1.75
LMCD1-204ENST00000426878 E9PCH4 1651 aa25.95■■□□□ 1.74
LMCD1-204ENST00000426878 KDM5AP29375 1690 aaKnown RBP25.95■■□□□ 1.74
LMCD1-204ENST00000426878 POLR1AO95602 1720 aaPredicted RBP25.94■■□□□ 1.74
LMCD1-204ENST00000426878 PIK3C2BO00750 1634 aa25.93■■□□□ 1.74
LMCD1-204ENST00000426878 NEURL4Q96JN8 1562 aa25.92■■□□□ 1.74
LMCD1-204ENST00000426878 MED14O60244 1454 aa25.92■■□□□ 1.74
LMCD1-204ENST00000426878 SLIT1O75093 1534 aa25.91■■□□□ 1.74
LMCD1-204ENST00000426878 ARHGAP23Q9P227 1491 aa25.9■■□□□ 1.74
LMCD1-204ENST00000426878 STAG3Q9UJ98 1225 aa25.88■■□□□ 1.73
LMCD1-204ENST00000426878 TMEM2Q9UHN6 1383 aa25.86■■□□□ 1.73
LMCD1-204ENST00000426878 ADGRB3O60242 1522 aa25.85■■□□□ 1.73
LMCD1-204ENST00000426878 NPHP4O75161 1426 aaPredicted RBP25.85■■□□□ 1.73
LMCD1-204ENST00000426878 CERKQ8TCT0 537 aa25.85■■□□□ 1.73
LMCD1-204ENST00000426878 LTBP4Q8N2S1 1624 aa25.83■■□□□ 1.73
LMCD1-204ENST00000426878 SCAF11Q99590 1463 aaKnown RBP25.83■■□□□ 1.73
LMCD1-204ENST00000426878 LTKP29376 864 aa25.82■■□□□ 1.72
LMCD1-204ENST00000426878 TRIM52Q96A61 297 aa25.82■■□□□ 1.72
LMCD1-204ENST00000426878 TXNDC2Q86VQ3 553 aa25.81■■□□□ 1.72
LMCD1-204ENST00000426878 EID1Q9Y6B2 187 aa25.81■■□□□ 1.72
LMCD1-204ENST00000426878 ACIN1Q9UKV3 1341 aaKnown RBP25.81■■□□□ 1.72
LMCD1-204ENST00000426878 IQGAP1P46940 1657 aa25.8■■□□□ 1.72
LMCD1-204ENST00000426878 ZNF335Q9H4Z2 1342 aaPredicted RBP25.79■■□□□ 1.72
LMCD1-204ENST00000426878 TMEM131LA2VDJ0 1609 aa25.79■■□□□ 1.72
LMCD1-204ENST00000426878 SPHKAPQ2M3C7 1700 aa25.78■■□□□ 1.72
LMCD1-204ENST00000426878 SETD5Q9C0A6 1442 aa25.77■■□□□ 1.72
LMCD1-204ENST00000426878 FBXO41Q8TF61 875 aa25.77■■□□□ 1.72
LMCD1-204ENST00000426878 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
LMCD1-204ENST00000426878 SLC4A1APQ9BWU0 796 aaKnown RBP25.76■■□□□ 1.71
LMCD1-204ENST00000426878 MYO5BQ9ULV0 1848 aa25.73■■□□□ 1.71
LMCD1-204ENST00000426878 ZFYVE9O95405 1425 aa25.72■■□□□ 1.71
LMCD1-204ENST00000426878 TRPM2O94759 1503 aa25.72■■□□□ 1.71
LMCD1-204ENST00000426878 IQSEC2Q5JU85 1478 aa25.72■■□□□ 1.71
LMCD1-204ENST00000426878 HDGFP51858 240 aaKnown RBP25.71■■□□□ 1.71
LMCD1-204ENST00000426878 RIMS2Q9UQ26 1411 aa25.69■■□□□ 1.7
LMCD1-204ENST00000426878 CHGAP10645 457 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms