RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 PPARGC1BQ86YN6 1023 aaKnown RBP4.32□□□□□ -1.72
LINC00407-201ENST00000426509 TMC2Q8TDI7 906 aa4.32□□□□□ -1.72
LINC00407-201ENST00000426509 ZSWIM6Q9HCJ5 1215 aa4.32□□□□□ -1.72
LINC00407-201ENST00000426509 RYDENQ9NUL5 291 aaKnown RBP4.32□□□□□ -1.72
LINC00407-201ENST00000426509 SNAPC4Q5SXM2 1469 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 LMTK3Q96Q04 1460 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 RAD54L2Q9Y4B4 1467 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 WRNQ14191 1432 aaPredicted RBP eCLIP4.31□□□□□ -1.72
LINC00407-201ENST00000426509 FAM205CA6NFA0 338 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 SOCS7O14512 581 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 HAP1P54257 671 aaPredicted RBP4.31□□□□□ -1.72
LINC00407-201ENST00000426509 EMP3P54852 163 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 PLPP6Q8IY26 295 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 ZNF710Q8N1W2 664 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 HS3ST6Q96QI5 342 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 HECW2Q9P2P5 1572 aa4.31□□□□□ -1.72
LINC00407-201ENST00000426509 CHMP7Q8WUX9 453 aaPredicted RBP4.3□□□□□ -1.72
LINC00407-201ENST00000426509 PCDHGA4Q9Y5G9 962 aa4.3□□□□□ -1.72
LINC00407-201ENST00000426509 TARBP1Q13395 1621 aaKnown RBP4.3□□□□□ -1.72
LINC00407-201ENST00000426509 TNIKQ9UKE5 1360 aa4.29□□□□□ -1.72
LINC00407-201ENST00000426509 FAM69CQ0P6D2 419 aa4.29□□□□□ -1.72
LINC00407-201ENST00000426509 SPRYD3Q8NCJ5 442 aa4.29□□□□□ -1.72
LINC00407-201ENST00000426509 PTCD2Q8WV60 388 aaKnown RBP4.29□□□□□ -1.72
LINC00407-201ENST00000426509 KRTAP3-3Q9BYR6 98 aa4.29□□□□□ -1.72
LINC00407-201ENST00000426509 KRTAP3-2Q9BYR7 98 aa4.29□□□□□ -1.72
LINC00407-201ENST00000426509 SYNJ2O15056 1496 aa4.29□□□□□ -1.72
LINC00407-201ENST00000426509 CEP162Q5TB80 1403 aa4.29□□□□□ -1.72
LINC00407-201ENST00000426509 KIF21BO75037 1637 aa4.28□□□□□ -1.72
LINC00407-201ENST00000426509 RIMBP2O15034 1052 aa4.28□□□□□ -1.72
LINC00407-201ENST00000426509 PDE4AP27815 886 aa4.28□□□□□ -1.72
LINC00407-201ENST00000426509 MFSD10Q14728 455 aa4.28□□□□□ -1.72
LINC00407-201ENST00000426509 ADGRL1O94910 1474 aa4.28□□□□□ -1.72
LINC00407-201ENST00000426509 GOLGA3Q08378 1498 aa4.28□□□□□ -1.72
LINC00407-201ENST00000426509 BIVM-ERCC5R4GMW8 1640 aa4.28□□□□□ -1.72
LINC00407-201ENST00000426509 ERBB3P21860 1342 aa4.27□□□□□ -1.73
LINC00407-201ENST00000426509 POLA1P09884 1462 aaPredicted RBP4.27□□□□□ -1.73
LINC00407-201ENST00000426509 ZNF316A6NFI3 1004 aaPredicted RBP4.27□□□□□ -1.73
LINC00407-201ENST00000426509 NUDT7P0C024 238 aa4.27□□□□□ -1.73
LINC00407-201ENST00000426509 VARS2Q5ST30 1063 aaKnown RBP4.27□□□□□ -1.73
LINC00407-201ENST00000426509 PPP1R15BQ5SWA1 713 aa4.27□□□□□ -1.73
LINC00407-201ENST00000426509 OXER1Q8TDS5 423 aa4.27□□□□□ -1.73
LINC00407-201ENST00000426509 LARP6Q9BRS8 491 aaKnown RBP4.27□□□□□ -1.73
LINC00407-201ENST00000426509 TSHZ2Q9NRE2 1034 aa4.27□□□□□ -1.73
LINC00407-201ENST00000426509 TOP2BQ02880 1626 aa4.27□□□□□ -1.73
LINC00407-201ENST00000426509 KIF13AQ9H1H9 1805 aa4.26□□□□□ -1.73
LINC00407-201ENST00000426509 POTEEQ6S8J3 1075 aa4.26□□□□□ -1.73
LINC00407-201ENST00000426509 LHX6Q9UPM6 363 aa4.26□□□□□ -1.73
LINC00407-201ENST00000426509 ABCC10Q5T3U5 1492 aa4.25□□□□□ -1.73
LINC00407-201ENST00000426509 ZNF687Q8N1G0 1237 aa4.25□□□□□ -1.73
LINC00407-201ENST00000426509 EMILIN3Q9NT22 766 aa4.25□□□□□ -1.73
LINC00407-201ENST00000426509 CUX1P39880 1505 aa4.25□□□□□ -1.73
LINC00407-201ENST00000426509 COL17A1Q9UMD9 1497 aaPredicted RBP4.24□□□□□ -1.73
LINC00407-201ENST00000426509 DNMBPQ6XZF7 1577 aa4.24□□□□□ -1.73
LINC00407-201ENST00000426509 ZEB1P37275 1124 aaPredicted RBP4.24□□□□□ -1.73
LINC00407-201ENST00000426509 DDX27Q96GQ7 796 aaKnown RBP4.24□□□□□ -1.73
LINC00407-201ENST00000426509 KDM2AQ9Y2K7 1162 aa4.24□□□□□ -1.73
LINC00407-201ENST00000426509 DISP3Q9P2K9 1392 aa4.24□□□□□ -1.73
LINC00407-201ENST00000426509 RAPGEF2Q9Y4G8 1499 aa4.24□□□□□ -1.73
LINC00407-201ENST00000426509 CAMK2BQ13554 666 aa4.23□□□□□ -1.73
LINC00407-201ENST00000426509 UPF1Q92900 1129 aaKnown RBP eCLIP4.23□□□□□ -1.73
LINC00407-201ENST00000426509 ANO8Q9HCE9 1232 aaPredicted RBP4.23□□□□□ -1.73
LINC00407-201ENST00000426509 KDM6BO15054 1643 aa4.23□□□□□ -1.73
LINC00407-201ENST00000426509 MAGI1Q96QZ7 1491 aaPredicted RBP4.23□□□□□ -1.73
LINC00407-201ENST00000426509 CEP170Q5SW79 1584 aa4.23□□□□□ -1.73
LINC00407-201ENST00000426509 CLIP1P30622 1438 aa4.22□□□□□ -1.73
LINC00407-201ENST00000426509 ERICH3Q5RHP9 1530 aa4.22□□□□□ -1.73
LINC00407-201ENST00000426509 PRDM2Q13029 1718 aa4.22□□□□□ -1.73
LINC00407-201ENST00000426509 GRIN2BQ13224 1484 aa4.22□□□□□ -1.73
LINC00407-201ENST00000426509 PRXQ9BXM0 1461 aa4.22□□□□□ -1.73
LINC00407-201ENST00000426509 DIP2BQ9P265 1576 aa4.22□□□□□ -1.73
LINC00407-201ENST00000426509 VPS8Q8N3P4 1428 aa4.21□□□□□ -1.73
LINC00407-201ENST00000426509 TBC1D12O60347 775 aa4.21□□□□□ -1.74
LINC00407-201ENST00000426509 UBTFP17480 764 aaKnown RBP4.21□□□□□ -1.74
LINC00407-201ENST00000426509 FGD5Q6ZNL6 1462 aa4.2□□□□□ -1.74
LINC00407-201ENST00000426509 VSIG10Q8N0Z9 540 aa4.2□□□□□ -1.74
LINC00407-201ENST00000426509 AXIN2Q9Y2T1 843 aa4.2□□□□□ -1.74
LINC00407-201ENST00000426509 EVI5O60447 810 aa4.19□□□□□ -1.74
LINC00407-201ENST00000426509 NUP160Q12769 1436 aa4.19□□□□□ -1.74
LINC00407-201ENST00000426509 KIF27Q86VH2 1401 aa4.19□□□□□ -1.74
LINC00407-201ENST00000426509 FOSBP53539 338 aa4.18□□□□□ -1.74
LINC00407-201ENST00000426509 MAP3K9P80192 1104 aa4.18□□□□□ -1.74
LINC00407-201ENST00000426509 PRG4Q92954 1404 aaPredicted RBP4.18□□□□□ -1.74
LINC00407-201ENST00000426509 TTBK1Q5TCY1 1321 aaPredicted RBP4.18□□□□□ -1.74
LINC00407-201ENST00000426509 GRIN2AQ12879 1464 aa4.18□□□□□ -1.74
LINC00407-201ENST00000426509 MAPKBP1O60336 1514 aa4.17□□□□□ -1.74
LINC00407-201ENST00000426509 DPYSL4O14531 572 aa4.17□□□□□ -1.74
LINC00407-201ENST00000426509 PSEN2P49810 448 aa4.17□□□□□ -1.74
LINC00407-201ENST00000426509 LSM11P83369 360 aaKnown RBP eCLIP4.17□□□□□ -1.74
LINC00407-201ENST00000426509 RNF166Q96A37 237 aaPredicted RBP4.17□□□□□ -1.74
LINC00407-201ENST00000426509 PSDA5PKW4 1024 aaPredicted RBP4.16□□□□□ -1.74
LINC00407-201ENST00000426509 ARHGAP33O14559 1287 aa4.16□□□□□ -1.74
LINC00407-201ENST00000426509 PBX2P40425 430 aa4.16□□□□□ -1.74
LINC00407-201ENST00000426509 DMRTA1Q5VZB9 504 aa4.16□□□□□ -1.74
LINC00407-201ENST00000426509 ANKRD13DQ6ZTN6 518 aa4.16□□□□□ -1.74
LINC00407-201ENST00000426509 ZNF454Q8N9F8 522 aa4.16□□□□□ -1.74
LINC00407-201ENST00000426509 CERKQ8TCT0 537 aa4.16□□□□□ -1.74
LINC00407-201ENST00000426509 JPH4Q96JJ6 628 aa4.16□□□□□ -1.74
LINC00407-201ENST00000426509 ARIH1Q9Y4X5 557 aaPredicted RBP4.16□□□□□ -1.74
LINC00407-201ENST00000426509 PCDHGA10Q9Y5H3 936 aa4.16□□□□□ -1.74
LINC00407-201ENST00000426509 SHROOM2Q13796 1616 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms