RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 BCORL1Q5H9F3 1711 aa17.92■□□□□ 0.46
LRCH3-203ENST00000425562 ST20-MTHFSA0A0A6YYL1 179 aa17.91■□□□□ 0.46
LRCH3-203ENST00000425562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.461e-7■■□□□ 14.2
LRCH3-203ENST00000425562 TSPY4P0CV99 314 aa17.91■□□□□ 0.46
LRCH3-203ENST00000425562 TSPY10P0CW01 314 aa17.91■□□□□ 0.46
LRCH3-203ENST00000425562 BACH2Q9BYV9 841 aa17.9■□□□□ 0.46
LRCH3-203ENST00000425562 TCERG1O14776 1098 aaKnown RBP17.87■□□□□ 0.45
LRCH3-203ENST00000425562 CARMIL2Q6F5E8 1435 aa17.87■□□□□ 0.45
LRCH3-203ENST00000425562 CRBNQ96SW2 442 aa17.85■□□□□ 0.45
LRCH3-203ENST00000425562 C9orf84Q5VXU9 1444 aa17.85■□□□□ 0.45
LRCH3-203ENST00000425562 CC2D1BQ5T0F9 858 aaKnown RBP17.85■□□□□ 0.45
LRCH3-203ENST00000425562 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
LRCH3-203ENST00000425562 C20orf194Q5TEA3 1177 aa17.84■□□□□ 0.45
LRCH3-203ENST00000425562 DAXXQ9UER7 740 aaPredicted RBP17.84■□□□□ 0.45
LRCH3-203ENST00000425562 ITSN2Q9NZM3 1697 aa17.83■□□□□ 0.45
LRCH3-203ENST00000425562 FRAT1Q92837 279 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-203ENST00000425562 ATP10BO94823 1461 aa17.82■□□□□ 0.44
LRCH3-203ENST00000425562 MBD5Q9P267 1494 aa17.82■□□□□ 0.44
LRCH3-203ENST00000425562 ADGBQ8N7X0 1667 aa17.82■□□□□ 0.44
LRCH3-203ENST00000425562 NFKBIBQ15653 356 aa17.82■□□□□ 0.44
LRCH3-203ENST00000425562 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
LRCH3-203ENST00000425562 ARXQ96QS3 562 aa17.82■□□□□ 0.44
LRCH3-203ENST00000425562 MAGI1Q96QZ7 1491 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-203ENST00000425562 RGS3P49796 1198 aa17.8■□□□□ 0.44
LRCH3-203ENST00000425562 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
LRCH3-203ENST00000425562 PPM1GO15355 546 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-203ENST00000425562 GSE1Q14687 1217 aa17.79■□□□□ 0.44
LRCH3-203ENST00000425562 CDC42BPAQ5VT25 1732 aa17.79■□□□□ 0.44
LRCH3-203ENST00000425562 KDM5CP41229 1560 aa17.78■□□□□ 0.44
LRCH3-203ENST00000425562 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
LRCH3-203ENST00000425562 ADGRL2O95490 1459 aa17.78■□□□□ 0.44
LRCH3-203ENST00000425562 CROCC2H7BZ55 1655 aa17.78■□□□□ 0.44
LRCH3-203ENST00000425562 POLR1AO95602 1720 aaPredicted RBP17.77■□□□□ 0.44
LRCH3-203ENST00000425562 MYBBP1AQ9BQG0 1328 aaKnown RBP17.75■□□□□ 0.43
LRCH3-203ENST00000425562 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
LRCH3-203ENST00000425562 ABCC10Q5T3U5 1492 aa17.74■□□□□ 0.43
LRCH3-203ENST00000425562 USP35Q9P2H5 1018 aa17.73■□□□□ 0.43
LRCH3-203ENST00000425562 NUP160Q12769 1436 aa17.73■□□□□ 0.43
LRCH3-203ENST00000425562 ADCY10Q96PN6 1610 aa17.72■□□□□ 0.43
LRCH3-203ENST00000425562 PTPRGP23470 1445 aa17.72■□□□□ 0.43
LRCH3-203ENST00000425562 WASHC2CQ9Y4E1 1318 aa17.72■□□□□ 0.43
LRCH3-203ENST00000425562 RALGAPBQ86X10 1494 aa17.71■□□□□ 0.43
LRCH3-203ENST00000425562 ABCA8O94911 1581 aa17.69■□□□□ 0.42
LRCH3-203ENST00000425562 MS4A1P11836 297 aa17.69■□□□□ 0.42
LRCH3-203ENST00000425562 NLRP13Q86W25 1043 aa17.67■□□□□ 0.42
LRCH3-203ENST00000425562 DDRGK1Q96HY6 314 aa17.67■□□□□ 0.42
LRCH3-203ENST00000425562 UHRF1BP1Q6BDS2 1440 aa17.67■□□□□ 0.42
LRCH3-203ENST00000425562 LRPPRCP42704 1394 aaKnown RBP17.67■□□□□ 0.42
LRCH3-203ENST00000425562 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
LRCH3-203ENST00000425562 RALBP1Q15311 655 aa17.66■□□□□ 0.42
LRCH3-203ENST00000425562 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
LRCH3-203ENST00000425562 FAM135AQ9P2D6 1515 aa17.64■□□□□ 0.41
LRCH3-203ENST00000425562 SAMD9LQ8IVG5 1584 aa17.63■□□□□ 0.41
LRCH3-203ENST00000425562 ARID4BQ4LE39 1312 aaPredicted RBP17.63■□□□□ 0.41
LRCH3-203ENST00000425562 SYCP2Q9BX26 1530 aa17.63■□□□□ 0.41
LRCH3-203ENST00000425562 KTN1Q86UP2 1357 aaKnown RBP17.62■□□□□ 0.41
LRCH3-203ENST00000425562 SLKQ9H2G2 1235 aaPredicted RBP17.62■□□□□ 0.41
LRCH3-203ENST00000425562 CCDC141Q6ZP82 1450 aa17.62■□□□□ 0.41
LRCH3-203ENST00000425562 SHANK2Q9UPX8 1470 aa17.62■□□□□ 0.41
LRCH3-203ENST00000425562 PANK3Q9H999 370 aa17.62■□□□□ 0.41
LRCH3-203ENST00000425562 DISP3Q9P2K9 1392 aa17.61■□□□□ 0.41
LRCH3-203ENST00000425562 ARHGAP5Q13017 1502 aa17.61■□□□□ 0.41
LRCH3-203ENST00000425562 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
LRCH3-203ENST00000425562 CDC42BPBQ9Y5S2 1711 aa17.61■□□□□ 0.41
LRCH3-203ENST00000425562 PLEKHH2Q8IVE3 1493 aa17.6■□□□□ 0.41
LRCH3-203ENST00000425562 CCDC146Q8IYE0 955 aa17.59■□□□□ 0.41
LRCH3-203ENST00000425562 PRAG1Q86YV5 1406 aa17.59■□□□□ 0.41
LRCH3-203ENST00000425562 ARHGEF12Q9NZN5 1544 aa17.59■□□□□ 0.41
LRCH3-203ENST00000425562 SPRYD3Q8NCJ5 442 aa17.58■□□□□ 0.41
LRCH3-203ENST00000425562 C8orf34Q49A92 452 aa17.58■□□□□ 0.4
LRCH3-203ENST00000425562 POGKQ9P215 609 aa17.58■□□□□ 0.4
LRCH3-203ENST00000425562 PLA2R1Q13018 1463 aa17.57■□□□□ 0.4
LRCH3-203ENST00000425562 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
LRCH3-203ENST00000425562 PDE3BQ13370 1112 aa17.57■□□□□ 0.4
LRCH3-203ENST00000425562 PER1O15534 1290 aaPredicted RBP17.56■□□□□ 0.4
LRCH3-203ENST00000425562 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
LRCH3-203ENST00000425562 TTC37Q6PGP7 1564 aa17.56■□□□□ 0.4
LRCH3-203ENST00000425562 A2MP01023 1474 aa17.56■□□□□ 0.4
LRCH3-203ENST00000425562 TESK2Q96S53 571 aa17.55■□□□□ 0.4
LRCH3-203ENST00000425562 ERCC6L2Q5T890 1561 aa17.54■□□□□ 0.4
LRCH3-203ENST00000425562 ARHGEF5Q12774 1597 aa17.52■□□□□ 0.4
LRCH3-203ENST00000425562 SEC24BO95487 1268 aa17.52■□□□□ 0.4
LRCH3-203ENST00000425562 BCAR3O75815 825 aa17.52■□□□□ 0.39
LRCH3-203ENST00000425562 PREX2Q70Z35 1606 aa17.51■□□□□ 0.39
LRCH3-203ENST00000425562 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
LRCH3-203ENST00000425562 PARD3Q8TEW0 1356 aa17.51■□□□□ 0.39
LRCH3-203ENST00000425562 KDM2BQ8NHM5 1336 aa17.51■□□□□ 0.39
LRCH3-203ENST00000425562 TRPM1Q7Z4N2 1603 aa17.51■□□□□ 0.39
LRCH3-203ENST00000425562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.5■□□□□ 0.391e-6■■■■□ 23.9
LRCH3-203ENST00000425562 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
LRCH3-203ENST00000425562 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
LRCH3-203ENST00000425562 GZF1Q9H116 711 aaPredicted RBP17.5■□□□□ 0.39
LRCH3-203ENST00000425562 TMF1P82094 1093 aa17.5■□□□□ 0.39
LRCH3-203ENST00000425562 RSPH4AQ5TD94 716 aa17.49■□□□□ 0.39
LRCH3-203ENST00000425562 UBE2Q2Q8WVN8 375 aa17.49■□□□□ 0.39
LRCH3-203ENST00000425562 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
LRCH3-203ENST00000425562 PLEKHH1Q9ULM0 1364 aa17.48■□□□□ 0.39
LRCH3-203ENST00000425562 ERBINQ96RT1 1412 aa17.48■□□□□ 0.39
LRCH3-203ENST00000425562 E9PCH4 1651 aa17.47■□□□□ 0.39
LRCH3-203ENST00000425562 DUSP27Q5VZP5 1158 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms