RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 KTN1Q86UP2 1357 aaKnown RBP17.52■□□□□ 0.4
SREBF2-202ENST00000424354 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.39
SREBF2-202ENST00000424354 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
SREBF2-202ENST00000424354 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
SREBF2-202ENST00000424354 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
SREBF2-202ENST00000424354 KIAA2012Q0VF49 1180 aa17.5■□□□□ 0.39
SREBF2-202ENST00000424354 SPRYD3Q8NCJ5 442 aa17.5■□□□□ 0.39
SREBF2-202ENST00000424354 SPAG9O60271 1321 aaKnown RBP17.49■□□□□ 0.39
SREBF2-202ENST00000424354 ANKRD30AQ9BXX3 1397 aa17.49■□□□□ 0.39
SREBF2-202ENST00000424354 RAPGEF6Q8TEU7 1601 aa17.49■□□□□ 0.39
SREBF2-202ENST00000424354 DRC7Q8IY82 874 aa17.49■□□□□ 0.39
SREBF2-202ENST00000424354 ARHGEF11O15085 1522 aa17.48■□□□□ 0.39
SREBF2-202ENST00000424354 KIF14Q15058 1648 aa17.48■□□□□ 0.39
SREBF2-202ENST00000424354 RALBP1Q15311 655 aa17.48■□□□□ 0.39
SREBF2-202ENST00000424354 DCAF11Q8TEB1 546 aa17.48■□□□□ 0.39
SREBF2-202ENST00000424354 GOLGA6L3A6NEY3 463 aa17.47■□□□□ 0.39
SREBF2-202ENST00000424354 POGKQ9P215 609 aa17.47■□□□□ 0.39
SREBF2-202ENST00000424354 RWDD1Q9H446 243 aaPredicted RBP17.47■□□□□ 0.39
SREBF2-202ENST00000424354 IPO8O15397 1037 aaKnown RBP17.46■□□□□ 0.39
SREBF2-202ENST00000424354 MLECQ14165 292 aa17.46■□□□□ 0.39
SREBF2-202ENST00000424354 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
SREBF2-202ENST00000424354 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
SREBF2-202ENST00000424354 ARHGAP5Q13017 1502 aa17.45■□□□□ 0.38
SREBF2-202ENST00000424354 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
SREBF2-202ENST00000424354 CD109Q6YHK3 1445 aa17.45■□□□□ 0.38
SREBF2-202ENST00000424354 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
SREBF2-202ENST00000424354 WDR7Q9Y4E6 1490 aa17.44■□□□□ 0.38
SREBF2-202ENST00000424354 MAP3K1Q13233 1512 aa17.43■□□□□ 0.38
SREBF2-202ENST00000424354 MORC1Q86VD1 984 aa17.43■□□□□ 0.38
SREBF2-202ENST00000424354 SLKQ9H2G2 1235 aaPredicted RBP17.43■□□□□ 0.38
SREBF2-202ENST00000424354 PMFBP1Q8TBY8 1022 aa17.42■□□□□ 0.38
SREBF2-202ENST00000424354 CFAP74Q9C0B2 1584 aa17.41■□□□□ 0.38
SREBF2-202ENST00000424354 EPRSP07814 1512 aaKnown RBP17.41■□□□□ 0.38
SREBF2-202ENST00000424354 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
SREBF2-202ENST00000424354 MYOM3Q5VTT5 1437 aa17.41■□□□□ 0.38
SREBF2-202ENST00000424354 NPHP1O15259 732 aa17.41■□□□□ 0.38
SREBF2-202ENST00000424354 NAP1L2Q9ULW6 460 aaPredicted RBP17.41■□□□□ 0.38
SREBF2-202ENST00000424354 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.4■□□□□ 0.38
SREBF2-202ENST00000424354 ASXL2Q76L83 1435 aa17.39■□□□□ 0.37
SREBF2-202ENST00000424354 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
SREBF2-202ENST00000424354 RAB3GAP2Q9H2M9 1393 aa17.38■□□□□ 0.37
SREBF2-202ENST00000424354 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
SREBF2-202ENST00000424354 RSPH6AQ9H0K4 717 aa17.37■□□□□ 0.37
SREBF2-202ENST00000424354 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
SREBF2-202ENST00000424354 SUPT6HQ7KZ85 1726 aaKnown RBP17.37■□□□□ 0.37
SREBF2-202ENST00000424354 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
SREBF2-202ENST00000424354 KIAA1211Q6ZU35 1233 aa17.35■□□□□ 0.37
SREBF2-202ENST00000424354 FOXD1Q16676 465 aa17.34■□□□□ 0.37
SREBF2-202ENST00000424354 ARAP1Q96P48 1450 aa17.33■□□□□ 0.37
SREBF2-202ENST00000424354 AKNAQ7Z591 1439 aa17.33■□□□□ 0.36
SREBF2-202ENST00000424354 PPP6R1Q9UPN7 881 aa17.32■□□□□ 0.36
SREBF2-202ENST00000424354 SAMD9Q5K651 1589 aa17.32■□□□□ 0.36
SREBF2-202ENST00000424354 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
SREBF2-202ENST00000424354 TAOK2Q9UL54 1235 aa17.32■□□□□ 0.36
SREBF2-202ENST00000424354 DISP1Q96F81 1524 aa17.32■□□□□ 0.36
SREBF2-202ENST00000424354 LRRC9Q6ZRR7 1453 aa17.32■□□□□ 0.36
SREBF2-202ENST00000424354 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
SREBF2-202ENST00000424354 ROCK2O75116 1388 aaKnown RBP17.31■□□□□ 0.36
SREBF2-202ENST00000424354 MFAP1P55081 439 aaKnown RBP17.3■□□□□ 0.36
SREBF2-202ENST00000424354 PKD2Q13563 968 aa17.3■□□□□ 0.36
SREBF2-202ENST00000424354 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
SREBF2-202ENST00000424354 FANCIQ9NVI1 1328 aa17.3■□□□□ 0.36
SREBF2-202ENST00000424354 CSPP1Q1MSJ5 1256 aa17.3■□□□□ 0.36
SREBF2-202ENST00000424354 GOLGA2Q08379 1002 aa17.29■□□□□ 0.36
SREBF2-202ENST00000424354 HSP90AA2PQ14568 343 aaPredicted RBP17.29■□□□□ 0.36
SREBF2-202ENST00000424354 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
SREBF2-202ENST00000424354 RIMBP3CA6NJZ7 1639 aa17.28■□□□□ 0.36
SREBF2-202ENST00000424354 RIMBP3BA6NNM3 1639 aa17.28■□□□□ 0.36
SREBF2-202ENST00000424354 RIMBP3Q9UFD9 1639 aa17.28■□□□□ 0.36
SREBF2-202ENST00000424354 TPM4P67936 248 aa17.28■□□□□ 0.36
SREBF2-202ENST00000424354 MPHOSPH9Q99550 1183 aa17.28■□□□□ 0.36
SREBF2-202ENST00000424354 NCOA2Q15596 1464 aa17.27■□□□□ 0.36
SREBF2-202ENST00000424354 NLRP13Q86W25 1043 aa17.27■□□□□ 0.36
SREBF2-202ENST00000424354 RTF1Q92541 710 aaKnown RBP17.27■□□□□ 0.36
SREBF2-202ENST00000424354 TNNT3P45378 269 aaPredicted RBP17.27■□□□□ 0.35
SREBF2-202ENST00000424354 PHF14O94880 888 aa17.27■□□□□ 0.35
SREBF2-202ENST00000424354 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.35
SREBF2-202ENST00000424354 TIAM1Q13009 1591 aa17.26■□□□□ 0.35
SREBF2-202ENST00000424354 SHROOM2Q13796 1616 aa17.26■□□□□ 0.35
SREBF2-202ENST00000424354 GSE1Q14687 1217 aa17.26■□□□□ 0.35
SREBF2-202ENST00000424354 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
SREBF2-202ENST00000424354 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
SREBF2-202ENST00000424354 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
SREBF2-202ENST00000424354 NEO1Q92859 1461 aa17.25■□□□□ 0.35
SREBF2-202ENST00000424354 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
SREBF2-202ENST00000424354 ATP10BO94823 1461 aa17.25■□□□□ 0.35
SREBF2-202ENST00000424354 ARID3AQ99856 593 aa17.24■□□□□ 0.35
SREBF2-202ENST00000424354 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
SREBF2-202ENST00000424354 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.351e-6■■■■□ 25.8
SREBF2-202ENST00000424354 HDGFL2Q7Z4V5 671 aaPredicted RBP17.24■□□□□ 0.35
SREBF2-202ENST00000424354 CENPQQ7L2Z9 268 aaPredicted RBP17.24■□□□□ 0.35
SREBF2-202ENST00000424354 KDM5BQ9UGL1 1544 aa17.23■□□□□ 0.35
SREBF2-202ENST00000424354 GGT6Q6P531 493 aa17.23■□□□□ 0.35
SREBF2-202ENST00000424354 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
SREBF2-202ENST00000424354 APBB1O00213 710 aa17.23■□□□□ 0.35
SREBF2-202ENST00000424354 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
SREBF2-202ENST00000424354 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
SREBF2-202ENST00000424354 CENPJQ9HC77 1338 aaPredicted RBP17.23■□□□□ 0.35
SREBF2-202ENST00000424354 HNRNPMP52272 730 aaKnown RBP eCLIP17.23■□□□□ 0.352e-7■■□□□ 12
SREBF2-202ENST00000424354 ABCA8O94911 1581 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms