RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 DHX29Q7Z478 1369 aaKnown RBP20.95■□□□□ 0.94
ACTN4-203ENST00000424234 SETD5Q9C0A6 1442 aa20.95■□□□□ 0.94
ACTN4-203ENST00000424234 CEP152O94986 1710 aa20.94■□□□□ 0.94
ACTN4-203ENST00000424234 PRDM15P57071 1507 aaPredicted RBP20.93■□□□□ 0.94
ACTN4-203ENST00000424234 RAB3GAP2Q9H2M9 1393 aa20.91■□□□□ 0.94
ACTN4-203ENST00000424234 IQGAP3Q86VI3 1631 aa20.9■□□□□ 0.94
ACTN4-203ENST00000424234 ZC3H13Q5T200 1668 aaKnown RBP20.9■□□□□ 0.94
ACTN4-203ENST00000424234 FER1L4A9Z1Z3 1794 aa20.89■□□□□ 0.93
ACTN4-203ENST00000424234 KDM5DQ9BY66 1539 aa20.87■□□□□ 0.93
ACTN4-203ENST00000424234 VWDEQ8N2E2 1590 aa20.87■□□□□ 0.93
ACTN4-203ENST00000424234 CLTCQ00610 1675 aaKnown RBP20.85■□□□□ 0.93
ACTN4-203ENST00000424234 TET3O43151 1660 aa20.83■□□□□ 0.92
ACTN4-203ENST00000424234 CAMSAP1Q5T5Y3 1602 aa20.82■□□□□ 0.92
ACTN4-203ENST00000424234 FAM135AQ9P2D6 1515 aa20.82■□□□□ 0.92
ACTN4-203ENST00000424234 CFAP65Q6ZU64 1925 aaKnown RBP20.81■□□□□ 0.92
ACTN4-203ENST00000424234 ADAMTSL3P82987 1691 aa20.81■□□□□ 0.92
ACTN4-203ENST00000424234 KIF3BO15066 747 aa20.8■□□□□ 0.92
ACTN4-203ENST00000424234 MROH2AA6NES4 1674 aa20.8■□□□□ 0.92
ACTN4-203ENST00000424234 ABCC3O15438 1527 aa20.79■□□□□ 0.92
ACTN4-203ENST00000424234 MADDQ8WXG6 1647 aa20.79■□□□□ 0.92
ACTN4-203ENST00000424234 E9PCH4 1651 aa20.78■□□□□ 0.92
ACTN4-203ENST00000424234 PZPP20742 1482 aa20.78■□□□□ 0.92
ACTN4-203ENST00000424234 RIMS1Q86UR5 1692 aaKnown RBP20.77■□□□□ 0.91
ACTN4-203ENST00000424234 LMTK2Q8IWU2 1503 aa20.76■□□□□ 0.91
ACTN4-203ENST00000424234 EFCAB6Q5THR3 1501 aa20.76■□□□□ 0.91
ACTN4-203ENST00000424234 ARID4BQ4LE39 1312 aaPredicted RBP20.74■□□□□ 0.91
ACTN4-203ENST00000424234 NUP155O75694 1391 aa20.73■□□□□ 0.91
ACTN4-203ENST00000424234 C3P01024 1663 aa20.72■□□□□ 0.91
ACTN4-203ENST00000424234 SPHKAPQ2M3C7 1700 aa20.72■□□□□ 0.91
ACTN4-203ENST00000424234 GGT6Q6P531 493 aa20.72■□□□□ 0.91
ACTN4-203ENST00000424234 KANK1Q14678 1352 aa20.71■□□□□ 0.91
ACTN4-203ENST00000424234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.7■□□□□ 0.98e-8■□□□□ 10.6
ACTN4-203ENST00000424234 PREX1Q8TCU6 1659 aa20.7■□□□□ 0.9
ACTN4-203ENST00000424234 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
ACTN4-203ENST00000424234 MLECQ14165 292 aa20.68■□□□□ 0.9
ACTN4-203ENST00000424234 TRIM52Q96A61 297 aa20.68■□□□□ 0.9
ACTN4-203ENST00000424234 CNTLNQ9NXG0 1405 aa20.65■□□□□ 0.9
ACTN4-203ENST00000424234 DHX57Q6P158 1386 aaKnown RBP20.64■□□□□ 0.9
ACTN4-203ENST00000424234 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
ACTN4-203ENST00000424234 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
ACTN4-203ENST00000424234 RPRD2Q5VT52 1461 aaKnown RBP20.62■□□□□ 0.89
ACTN4-203ENST00000424234 NPATQ14207 1427 aa20.61■□□□□ 0.89
ACTN4-203ENST00000424234 ARHGAP31Q2M1Z3 1444 aa20.61■□□□□ 0.89
ACTN4-203ENST00000424234 MPHOSPH9Q99550 1183 aa20.59■□□□□ 0.89
ACTN4-203ENST00000424234 SLC4A1APQ9BWU0 796 aaKnown RBP20.59■□□□□ 0.89
ACTN4-203ENST00000424234 SYNMO15061 1565 aa20.58■□□□□ 0.89
ACTN4-203ENST00000424234 SPATA31D1Q6ZQQ2 1576 aa20.58■□□□□ 0.89
ACTN4-203ENST00000424234 TRPM2O94759 1503 aa20.58■□□□□ 0.88
ACTN4-203ENST00000424234 MYO5BQ9ULV0 1848 aa20.57■□□□□ 0.88
ACTN4-203ENST00000424234 PIK3C2BO00750 1634 aa20.57■□□□□ 0.88
ACTN4-203ENST00000424234 ERVK-7P63135 1459 aa20.56■□□□□ 0.88
ACTN4-203ENST00000424234 KIF1BO60333 1816 aa20.56■□□□□ 0.88
ACTN4-203ENST00000424234 CLSPNQ9HAW4 1339 aa20.56■□□□□ 0.88
ACTN4-203ENST00000424234 CLTCL1P53675 1640 aa20.55■□□□□ 0.88
ACTN4-203ENST00000424234 SETD1BQ9UPS6 1966 aaKnown RBP20.55■□□□□ 0.88
ACTN4-203ENST00000424234 PKD2Q13563 968 aa20.55■□□□□ 0.88
ACTN4-203ENST00000424234 ESF1Q9H501 851 aaKnown RBP20.55■□□□□ 0.88
ACTN4-203ENST00000424234 ZMYM3Q14202 1370 aa20.53■□□□□ 0.88
ACTN4-203ENST00000424234 PTPRMP28827 1452 aa20.52■□□□□ 0.88
ACTN4-203ENST00000424234 MYO3AQ8NEV4 1616 aa20.52■□□□□ 0.88
ACTN4-203ENST00000424234 NOS1P29475 1434 aa20.52■□□□□ 0.88
ACTN4-203ENST00000424234 FOXD1Q16676 465 aa20.51■□□□□ 0.87
ACTN4-203ENST00000424234 PTPRTO14522 1441 aa20.51■□□□□ 0.87
ACTN4-203ENST00000424234 UGGT1Q9NYU2 1555 aa20.51■□□□□ 0.87
ACTN4-203ENST00000424234 PLA2R1Q13018 1463 aa20.51■□□□□ 0.87
ACTN4-203ENST00000424234 ZNF142P52746 1687 aaPredicted RBP20.49■□□□□ 0.87
ACTN4-203ENST00000424234 ANKRD30BQ9BXX2 1392 aa20.48■□□□□ 0.87
ACTN4-203ENST00000424234 KDM4FA0A1W2PPD8 638 aa20.46■□□□□ 0.87
ACTN4-203ENST00000424234 KDM5AP29375 1690 aaKnown RBP20.46■□□□□ 0.87
ACTN4-203ENST00000424234 UBR1Q8IWV7 1749 aa20.45■□□□□ 0.86
ACTN4-203ENST00000424234 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
ACTN4-203ENST00000424234 CEBPAP49715 358 aaPredicted RBP20.43■□□□□ 0.86
ACTN4-203ENST00000424234 FBXO31Q5XUX0 539 aaPredicted RBP20.43■□□□□ 0.86
ACTN4-203ENST00000424234 DIEXFQ68CQ4 756 aaKnown RBP20.42■□□□□ 0.86
ACTN4-203ENST00000424234 IFT172Q9UG01 1749 aa20.42■□□□□ 0.86
ACTN4-203ENST00000424234 TMEM131LA2VDJ0 1609 aa20.42■□□□□ 0.86
ACTN4-203ENST00000424234 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
ACTN4-203ENST00000424234 TNRQ92752 1358 aa20.41■□□□□ 0.86
ACTN4-203ENST00000424234 ADGRB3O60242 1522 aa20.41■□□□□ 0.86
ACTN4-203ENST00000424234 NEURL4Q96JN8 1562 aa20.4■□□□□ 0.86
ACTN4-203ENST00000424234 CEP170BQ9Y4F5 1589 aaPredicted RBP20.39■□□□□ 0.86
ACTN4-203ENST00000424234 PPLO60437 1756 aa20.39■□□□□ 0.85
ACTN4-203ENST00000424234 NLRP1Q9C000 1473 aa20.38■□□□□ 0.85
ACTN4-203ENST00000424234 PLPPR3Q6T4P5 718 aa20.38■□□□□ 0.85
ACTN4-203ENST00000424234 A2ML1A8K2U0 1454 aa20.33■□□□□ 0.84
ACTN4-203ENST00000424234 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
ACTN4-203ENST00000424234 SIN3AQ96ST3 1273 aa20.31■□□□□ 0.84
ACTN4-203ENST00000424234 SLC52A1Q9NWF4 448 aa20.3■□□□□ 0.84
ACTN4-203ENST00000424234 POLR1AO95602 1720 aaPredicted RBP20.3■□□□□ 0.84
ACTN4-203ENST00000424234 IDI1Q13907 227 aa20.29■□□□□ 0.84
ACTN4-203ENST00000424234 NEXMIFQ5QGS0 1516 aa20.28■□□□□ 0.84
ACTN4-203ENST00000424234 UHRF1BP1Q6BDS2 1440 aa20.28■□□□□ 0.84
ACTN4-203ENST00000424234 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
ACTN4-203ENST00000424234 SLIT1O75093 1534 aa20.23■□□□□ 0.83
ACTN4-203ENST00000424234 LMTK3Q96Q04 1460 aa20.23■□□□□ 0.83
ACTN4-203ENST00000424234 ARHGAP23Q9P227 1491 aa20.21■□□□□ 0.83
ACTN4-203ENST00000424234 TONSLQ96HA7 1378 aa20.2■□□□□ 0.82
ACTN4-203ENST00000424234 CHGAP10645 457 aaKnown RBP20.2■□□□□ 0.82
ACTN4-203ENST00000424234 ZFYVE9O95405 1425 aa20.19■□□□□ 0.82
ACTN4-203ENST00000424234 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms