RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 IPO9Q96P70 1041 aaKnown RBP20.42■□□□□ 0.86
C9orf3-204ENST00000424143 PLEKHD1A6NEE1 506 aa20.41■□□□□ 0.86
C9orf3-204ENST00000424143 PARD3Q8TEW0 1356 aa20.41■□□□□ 0.86
C9orf3-204ENST00000424143 TRPM1Q7Z4N2 1603 aa20.4■□□□□ 0.86
C9orf3-204ENST00000424143 ANP32AP39687 249 aaKnown RBP20.4■□□□□ 0.86
C9orf3-204ENST00000424143 ATP10BO94823 1461 aa20.39■□□□□ 0.86
C9orf3-204ENST00000424143 MAST1Q9Y2H9 1570 aa20.39■□□□□ 0.85
C9orf3-204ENST00000424143 TSPY4P0CV99 314 aa20.38■□□□□ 0.85
C9orf3-204ENST00000424143 TSPY10P0CW01 314 aa20.38■□□□□ 0.85
C9orf3-204ENST00000424143 TCERG1O14776 1098 aaKnown RBP20.38■□□□□ 0.85
C9orf3-204ENST00000424143 NLRP13Q86W25 1043 aa20.38■□□□□ 0.85
C9orf3-204ENST00000424143 MS4A1P11836 297 aa20.36■□□□□ 0.85
C9orf3-204ENST00000424143 RRP1P56182 461 aaKnown RBP20.36■□□□□ 0.85
C9orf3-204ENST00000424143 PRAG1Q86YV5 1406 aa20.36■□□□□ 0.85
C9orf3-204ENST00000424143 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
C9orf3-204ENST00000424143 UNC13BO14795 1591 aa20.35■□□□□ 0.85
C9orf3-204ENST00000424143 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
C9orf3-204ENST00000424143 PLEKHH2Q8IVE3 1493 aa20.35■□□□□ 0.85
C9orf3-204ENST00000424143 ST20-MTHFSA0A0A6YYL1 179 aa20.35■□□□□ 0.85
C9orf3-204ENST00000424143 FAM135AQ9P2D6 1515 aa20.34■□□□□ 0.85
C9orf3-204ENST00000424143 CHMP7Q8WUX9 453 aaPredicted RBP20.33■□□□□ 0.84
C9orf3-204ENST00000424143 ZNF777Q9ULD5 760 aaPredicted RBP20.33■□□□□ 0.84
C9orf3-204ENST00000424143 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
C9orf3-204ENST00000424143 ATP10AO60312 1499 aa20.32■□□□□ 0.84
C9orf3-204ENST00000424143 PREX2Q70Z35 1606 aa20.32■□□□□ 0.84
C9orf3-204ENST00000424143 DEKP35659 375 aaKnown RBP20.31■□□□□ 0.84
C9orf3-204ENST00000424143 ZNF326Q5BKZ1 582 aaKnown RBP20.31■□□□□ 0.84
C9orf3-204ENST00000424143 PRDM15P57071 1507 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-204ENST00000424143 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-204ENST00000424143 BLMP54132 1417 aaPredicted RBP20.3■□□□□ 0.84
C9orf3-204ENST00000424143 PER1O15534 1290 aaPredicted RBP20.3■□□□□ 0.84
C9orf3-204ENST00000424143 RCAN3Q9UKA8 241 aa20.3■□□□□ 0.84
C9orf3-204ENST00000424143 ZBTB47Q9UFB7 747 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-204ENST00000424143 SAMD9LQ8IVG5 1584 aa20.27■□□□□ 0.84
C9orf3-204ENST00000424143 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.84
C9orf3-204ENST00000424143 PAK3O75914 559 aaPredicted RBP20.27■□□□□ 0.83
C9orf3-204ENST00000424143 DCAF11Q8TEB1 546 aa20.27■□□□□ 0.83
C9orf3-204ENST00000424143 POLR3GLQ9BT43 218 aa20.27■□□□□ 0.83
C9orf3-204ENST00000424143 IQGAP3Q86VI3 1631 aa20.27■□□□□ 0.83
C9orf3-204ENST00000424143 PLXNC1O60486 1568 aa20.26■□□□□ 0.83
C9orf3-204ENST00000424143 CDC42BPBQ9Y5S2 1711 aa20.26■□□□□ 0.83
C9orf3-204ENST00000424143 PLA2R1Q13018 1463 aa20.22■□□□□ 0.83
C9orf3-204ENST00000424143 MAGI2Q86UL8 1455 aa20.22■□□□□ 0.83
C9orf3-204ENST00000424143 USP35Q9P2H5 1018 aa20.22■□□□□ 0.83
C9orf3-204ENST00000424143 A2MP01023 1474 aa20.21■□□□□ 0.83
C9orf3-204ENST00000424143 RNF17Q9BXT8 1623 aaKnown RBP20.2■□□□□ 0.82
C9orf3-204ENST00000424143 BACH2Q9BYV9 841 aa20.2■□□□□ 0.82
C9orf3-204ENST00000424143 EXOC6Q8TAG9 804 aa20.19■□□□□ 0.82
C9orf3-204ENST00000424143 TESK2Q96S53 571 aa20.19■□□□□ 0.82
C9orf3-204ENST00000424143 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
C9orf3-204ENST00000424143 KDM2AQ9Y2K7 1162 aa20.18■□□□□ 0.82
C9orf3-204ENST00000424143 ERBINQ96RT1 1412 aa20.18■□□□□ 0.82
C9orf3-204ENST00000424143 PDE4AP27815 886 aa20.17■□□□□ 0.82
C9orf3-204ENST00000424143 HNRNPMP52272 730 aaKnown RBP eCLIP20.16■□□□□ 0.826e-7■■■□□ 18.3
C9orf3-204ENST00000424143 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
C9orf3-204ENST00000424143 DUOX2Q9NRD8 1548 aa20.16■□□□□ 0.82
C9orf3-204ENST00000424143 MYO5CQ9NQX4 1742 aa20.15■□□□□ 0.82
C9orf3-204ENST00000424143 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
C9orf3-204ENST00000424143 ERCC6Q03468 1493 aa20.14■□□□□ 0.82
C9orf3-204ENST00000424143 TMF1P82094 1093 aa20.13■□□□□ 0.81
C9orf3-204ENST00000424143 PPM1GO15355 546 aaPredicted RBP20.11■□□□□ 0.81
C9orf3-204ENST00000424143 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
C9orf3-204ENST00000424143 DDRGK1Q96HY6 314 aa20.1■□□□□ 0.81
C9orf3-204ENST00000424143 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
C9orf3-204ENST00000424143 SYCP2Q9BX26 1530 aa20.09■□□□□ 0.81
C9orf3-204ENST00000424143 NBPF1Q3BBV0 1214 aa20.08■□□□□ 0.8
C9orf3-204ENST00000424143 IQGAP1P46940 1657 aa20.07■□□□□ 0.8
C9orf3-204ENST00000424143 NEURL4Q96JN8 1562 aa20.06■□□□□ 0.8
C9orf3-204ENST00000424143 SCAPERQ9BY12 1400 aa20.06■□□□□ 0.8
C9orf3-204ENST00000424143 NBR1Q14596 966 aa20.06■□□□□ 0.8
C9orf3-204ENST00000424143 PANK3Q9H999 370 aa20.06■□□□□ 0.8
C9orf3-204ENST00000424143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.06■□□□□ 0.8
C9orf3-204ENST00000424143 SHROOM2Q13796 1616 aa20.06■□□□□ 0.8
C9orf3-204ENST00000424143 CNGB1Q14028 1251 aaPredicted RBP20.05■□□□□ 0.8
C9orf3-204ENST00000424143 SYNMO15061 1565 aa20.05■□□□□ 0.8
C9orf3-204ENST00000424143 WDR7Q9Y4E6 1490 aa20.05■□□□□ 0.8
C9orf3-204ENST00000424143 ARHGAP5Q13017 1502 aa20.05■□□□□ 0.8
C9orf3-204ENST00000424143 CDCA8Q53HL2 280 aa20.05■□□□□ 0.8
C9orf3-204ENST00000424143 PIK3C2GO75747 1445 aa20.04■□□□□ 0.8
C9orf3-204ENST00000424143 TTC37Q6PGP7 1564 aa20.03■□□□□ 0.8
C9orf3-204ENST00000424143 SLC24A1O60721 1099 aa20.03■□□□□ 0.8
C9orf3-204ENST00000424143 NGEFQ8N5V2 710 aa20.03■□□□□ 0.8
C9orf3-204ENST00000424143 KDM2BQ8NHM5 1336 aa20.03■□□□□ 0.8
C9orf3-204ENST00000424143 CDCA7LQ96GN5 454 aa20.02■□□□□ 0.8
C9orf3-204ENST00000424143 ZNF521Q96K83 1311 aa20.02■□□□□ 0.8
C9orf3-204ENST00000424143 MADDQ8WXG6 1647 aa20.02■□□□□ 0.8
C9orf3-204ENST00000424143 FBLN2P98095 1184 aa20.02■□□□□ 0.79
C9orf3-204ENST00000424143 KIAA1210Q9ULL0 1709 aa20.01■□□□□ 0.79
C9orf3-204ENST00000424143 CENPQQ7L2Z9 268 aaPredicted RBP20.01■□□□□ 0.79
C9orf3-204ENST00000424143 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
C9orf3-204ENST00000424143 CRBNQ96SW2 442 aa19.99■□□□□ 0.79
C9orf3-204ENST00000424143 SPHKAPQ2M3C7 1700 aa19.99■□□□□ 0.79
C9orf3-204ENST00000424143 ABCC2Q92887 1545 aa19.99■□□□□ 0.79
C9orf3-204ENST00000424143 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.98■□□□□ 0.79
C9orf3-204ENST00000424143 TRPM2O94759 1503 aa19.98■□□□□ 0.79
C9orf3-204ENST00000424143 PTPRTO14522 1441 aa19.98■□□□□ 0.79
C9orf3-204ENST00000424143 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
C9orf3-204ENST00000424143 SCAF11Q99590 1463 aaKnown RBP19.97■□□□□ 0.79
C9orf3-204ENST00000424143 RTEL1-TNFRSF6BF6WH68 1400 aa19.97■□□□□ 0.79
C9orf3-204ENST00000424143 ARAP3Q8WWN8 1544 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms