RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CNTLNQ9NXG0 1405 aa28.18■■■□□ 2.1
HDAC6-205ENST00000423941 MROH2AA6NES4 1674 aa28.16■■■□□ 2.1
HDAC6-205ENST00000423941 FAM135AQ9P2D6 1515 aa28.16■■■□□ 2.1
HDAC6-205ENST00000423941 MROH1Q8NDA8 1641 aa28.14■■■□□ 2.1
HDAC6-205ENST00000423941 DEPDC5O75140 1603 aa28.12■■■□□ 2.09
HDAC6-205ENST00000423941 C3P01024 1663 aa28.12■■■□□ 2.09
HDAC6-205ENST00000423941 CLTCQ00610 1675 aaKnown RBP28.11■■■□□ 2.09
HDAC6-205ENST00000423941 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
HDAC6-205ENST00000423941 ITGAEP38570 1179 aa28.09■■■□□ 2.09
HDAC6-205ENST00000423941 KDM5DQ9BY66 1539 aa28.08■■■□□ 2.09
HDAC6-205ENST00000423941 ESF1Q9H501 851 aaKnown RBP28.08■■■□□ 2.09
HDAC6-205ENST00000423941 ZMYM3Q14202 1370 aa28.08■■■□□ 2.09
HDAC6-205ENST00000423941 PRDM15P57071 1507 aaPredicted RBP28.07■■■□□ 2.08
HDAC6-205ENST00000423941 CEBPAP49715 358 aaPredicted RBP28.05■■■□□ 2.08
HDAC6-205ENST00000423941 SETD1BQ9UPS6 1966 aaKnown RBP28.04■■■□□ 2.08
HDAC6-205ENST00000423941 ZC3H13Q5T200 1668 aaKnown RBP28.03■■■□□ 2.08
HDAC6-205ENST00000423941 VWDEQ8N2E2 1590 aa28.03■■■□□ 2.08
HDAC6-205ENST00000423941 WASHC2CQ9Y4E1 1318 aa28.02■■■□□ 2.08
HDAC6-205ENST00000423941 ABCC3O15438 1527 aa28.01■■■□□ 2.07
HDAC6-205ENST00000423941 NAIPQ13075 1403 aa27.99■■■□□ 2.07
HDAC6-205ENST00000423941 NPATQ14207 1427 aa27.98■■■□□ 2.07
HDAC6-205ENST00000423941 CEP152O94986 1710 aa27.97■■■□□ 2.07
HDAC6-205ENST00000423941 UNC13BO14795 1591 aa27.96■■■□□ 2.07
HDAC6-205ENST00000423941 HFM1A2PYH4 1435 aa27.96■■■□□ 2.07
HDAC6-205ENST00000423941 GCC2Q8IWJ2 1684 aa27.96■■■□□ 2.07
HDAC6-205ENST00000423941 LMTK2Q8IWU2 1503 aa27.95■■■□□ 2.06
HDAC6-205ENST00000423941 PZPP20742 1482 aa27.95■■■□□ 2.06
HDAC6-205ENST00000423941 CAMSAP1Q5T5Y3 1602 aa27.92■■■□□ 2.06
HDAC6-205ENST00000423941 ARHGAP31Q2M1Z3 1444 aa27.92■■■□□ 2.06
HDAC6-205ENST00000423941 KANK1Q14678 1352 aa27.91■■■□□ 2.06
HDAC6-205ENST00000423941 PLPPR3Q6T4P5 718 aa27.91■■■□□ 2.06
HDAC6-205ENST00000423941 PREX1Q8TCU6 1659 aa27.91■■■□□ 2.06
HDAC6-205ENST00000423941 LMTK3Q96Q04 1460 aa27.9■■■□□ 2.06
HDAC6-205ENST00000423941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.9■■■□□ 2.062e-7■■□□□ 14.2
HDAC6-205ENST00000423941 FBXO31Q5XUX0 539 aaPredicted RBP27.86■■■□□ 2.05
HDAC6-205ENST00000423941 IQGAP3Q86VI3 1631 aa27.85■■■□□ 2.05
HDAC6-205ENST00000423941 SPATA31D1Q6ZQQ2 1576 aa27.83■■■□□ 2.05
HDAC6-205ENST00000423941 UHRF1BP1Q6BDS2 1440 aa27.82■■■□□ 2.04
HDAC6-205ENST00000423941 EFCAB6Q5THR3 1501 aa27.82■■■□□ 2.04
HDAC6-205ENST00000423941 TET3O43151 1660 aa27.81■■■□□ 2.04
HDAC6-205ENST00000423941 CFAP65Q6ZU64 1925 aaKnown RBP27.8■■■□□ 2.04
HDAC6-205ENST00000423941 ERVK-7P63135 1459 aa27.79■■■□□ 2.04
HDAC6-205ENST00000423941 MYO3AQ8NEV4 1616 aa27.78■■■□□ 2.04
HDAC6-205ENST00000423941 NUP155O75694 1391 aa27.78■■■□□ 2.04
HDAC6-205ENST00000423941 TNRQ92752 1358 aa27.77■■■□□ 2.04
HDAC6-205ENST00000423941 ZNF142P52746 1687 aaPredicted RBP27.77■■■□□ 2.04
HDAC6-205ENST00000423941 RPRD2Q5VT52 1461 aaKnown RBP27.76■■■□□ 2.04
HDAC6-205ENST00000423941 NOS1P29475 1434 aa27.73■■■□□ 2.03
HDAC6-205ENST00000423941 E9PCH4 1651 aa27.72■■■□□ 2.03
HDAC6-205ENST00000423941 SETD5Q9C0A6 1442 aa27.72■■■□□ 2.03
HDAC6-205ENST00000423941 NLRP1Q9C000 1473 aa27.71■■■□□ 2.03
HDAC6-205ENST00000423941 CEP170BQ9Y4F5 1589 aaPredicted RBP27.71■■■□□ 2.03
HDAC6-205ENST00000423941 A2ML1A8K2U0 1454 aa27.7■■■□□ 2.03
HDAC6-205ENST00000423941 HSPA2P54652 639 aa27.69■■■□□ 2.02
HDAC6-205ENST00000423941 ACIN1Q9UKV3 1341 aaKnown RBP27.67■■■□□ 2.02
HDAC6-205ENST00000423941 SYNMO15061 1565 aa27.66■■■□□ 2.02
HDAC6-205ENST00000423941 HRCP23327 699 aa27.63■■■□□ 2.01
HDAC6-205ENST00000423941 STRCQ7RTU9 1775 aa27.62■■■□□ 2.01
HDAC6-205ENST00000423941 RAB3GAP2Q9H2M9 1393 aa27.61■■■□□ 2.01
HDAC6-205ENST00000423941 TRIM52Q96A61 297 aa27.6■■■□□ 2.01
HDAC6-205ENST00000423941 UGGT1Q9NYU2 1555 aa27.59■■■□□ 2.01
HDAC6-205ENST00000423941 KDM5AP29375 1690 aaKnown RBP27.59■■■□□ 2.01
HDAC6-205ENST00000423941 PTPRTO14522 1441 aa27.58■■■□□ 2.01
HDAC6-205ENST00000423941 PLA2R1Q13018 1463 aa27.58■■■□□ 2.01
HDAC6-205ENST00000423941 IDI1Q13907 227 aa27.58■■■□□ 2.01
HDAC6-205ENST00000423941 SLC52A1Q9NWF4 448 aa27.58■■■□□ 2.01
HDAC6-205ENST00000423941 PIK3C2BO00750 1634 aa27.58■■■□□ 2.01
HDAC6-205ENST00000423941 UBR1Q8IWV7 1749 aa27.58■■■□□ 2.01
HDAC6-205ENST00000423941 SPHKAPQ2M3C7 1700 aa27.54■■■□□ 2
HDAC6-205ENST00000423941 THEMISQ8N1K5 641 aaPredicted RBP27.54■■■□□ 2
HDAC6-205ENST00000423941 SLC4A1APQ9BWU0 796 aaKnown RBP27.54■■■□□ 2
HDAC6-205ENST00000423941 PKD2Q13563 968 aa27.52■■■□□ 2
HDAC6-205ENST00000423941 MPHOSPH9Q99550 1183 aa27.51■■□□□ 1.99
HDAC6-205ENST00000423941 TRIM26Q12899 539 aaPredicted RBP27.5■■□□□ 1.99
HDAC6-205ENST00000423941 SLIT1O75093 1534 aa27.47■■□□□ 1.99
HDAC6-205ENST00000423941 ARHGAP23Q9P227 1491 aa27.47■■□□□ 1.99
HDAC6-205ENST00000423941 TRPM2O94759 1503 aa27.46■■□□□ 1.99
HDAC6-205ENST00000423941 TMEM131LA2VDJ0 1609 aa27.46■■□□□ 1.99
HDAC6-205ENST00000423941 ADGRB3O60242 1522 aa27.46■■□□□ 1.99
HDAC6-205ENST00000423941 POLR1AO95602 1720 aaPredicted RBP27.44■■□□□ 1.98
HDAC6-205ENST00000423941 DMRT2Q9Y5R5 561 aa27.43■■□□□ 1.98
HDAC6-205ENST00000423941 MYO5BQ9ULV0 1848 aa27.43■■□□□ 1.98
HDAC6-205ENST00000423941 NCKAP5LQ9HCH0 1330 aa27.42■■□□□ 1.98
HDAC6-205ENST00000423941 NEURL4Q96JN8 1562 aa27.41■■□□□ 1.98
HDAC6-205ENST00000423941 MED14O60244 1454 aa27.4■■□□□ 1.98
HDAC6-205ENST00000423941 TMEM2Q9UHN6 1383 aa27.4■■□□□ 1.98
HDAC6-205ENST00000423941 ANKLE2Q86XL3 938 aa27.4■■□□□ 1.98
HDAC6-205ENST00000423941 CLTCL1P53675 1640 aa27.4■■□□□ 1.98
HDAC6-205ENST00000423941 FOXD1Q16676 465 aa27.37■■□□□ 1.97
HDAC6-205ENST00000423941 STAG3Q9UJ98 1225 aa27.37■■□□□ 1.97
HDAC6-205ENST00000423941 LTKP29376 864 aa27.35■■□□□ 1.97
HDAC6-205ENST00000423941 ZFYVE9O95405 1425 aa27.33■■□□□ 1.97
HDAC6-205ENST00000423941 SCAF11Q99590 1463 aaKnown RBP27.33■■□□□ 1.97
HDAC6-205ENST00000423941 KIF1BO60333 1816 aa27.32■■□□□ 1.96
HDAC6-205ENST00000423941 TXNDC2Q86VQ3 553 aa27.31■■□□□ 1.96
HDAC6-205ENST00000423941 NPHP4O75161 1426 aaPredicted RBP27.29■■□□□ 1.96
HDAC6-205ENST00000423941 EID1Q9Y6B2 187 aa27.28■■□□□ 1.96
HDAC6-205ENST00000423941 IQGAP1P46940 1657 aa27.27■■□□□ 1.96
HDAC6-205ENST00000423941 RIMS2Q9UQ26 1411 aa27.26■■□□□ 1.95
HDAC6-205ENST00000423941 ANKRD30BQ9BXX2 1392 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms