RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 MROH1Q8NDA8 1641 aa32.87■■■□□ 2.85
SEC22C-207ENST00000423701 CLTCQ00610 1675 aaKnown RBP32.85■■■□□ 2.85
SEC22C-207ENST00000423701 DEPDC5O75140 1603 aa32.84■■■□□ 2.85
SEC22C-207ENST00000423701 CNTLNQ9NXG0 1405 aa32.84■■■□□ 2.85
SEC22C-207ENST00000423701 ESF1Q9H501 851 aaKnown RBP32.83■■■□□ 2.85
SEC22C-207ENST00000423701 FAM135AQ9P2D6 1515 aa32.83■■■□□ 2.85
SEC22C-207ENST00000423701 AEBP2Q6ZN18 517 aaPredicted RBP32.82■■■□□ 2.84
SEC22C-207ENST00000423701 PPP6R1Q9UPN7 881 aa32.82■■■□□ 2.84
SEC22C-207ENST00000423701 MROH2AA6NES4 1674 aa32.82■■■□□ 2.84
SEC22C-207ENST00000423701 PRDM15P57071 1507 aaPredicted RBP32.82■■■□□ 2.84
SEC22C-207ENST00000423701 KDM5DQ9BY66 1539 aa32.82■■■□□ 2.84
SEC22C-207ENST00000423701 GCC2Q8IWJ2 1684 aa32.79■■■□□ 2.84
SEC22C-207ENST00000423701 C3P01024 1663 aa32.78■■■□□ 2.84
SEC22C-207ENST00000423701 NAIPQ13075 1403 aa32.76■■■□□ 2.84
SEC22C-207ENST00000423701 ZC3H13Q5T200 1668 aaKnown RBP32.76■■■□□ 2.84
SEC22C-207ENST00000423701 HFM1A2PYH4 1435 aa32.75■■■□□ 2.83
SEC22C-207ENST00000423701 ABCC3O15438 1527 aa32.75■■■□□ 2.83
SEC22C-207ENST00000423701 WASHC2CQ9Y4E1 1318 aa32.73■■■□□ 2.83
SEC22C-207ENST00000423701 PLPPR3Q6T4P5 718 aa32.73■■■□□ 2.83
SEC22C-207ENST00000423701 CEP152O94986 1710 aa32.72■■■□□ 2.83
SEC22C-207ENST00000423701 UNC13BO14795 1591 aa32.71■■■□□ 2.83
SEC22C-207ENST00000423701 ZMYM3Q14202 1370 aa32.71■■■□□ 2.83
SEC22C-207ENST00000423701 CEBPAP49715 358 aaPredicted RBP32.71■■■□□ 2.83
SEC22C-207ENST00000423701 VWDEQ8N2E2 1590 aa32.7■■■□□ 2.83
SEC22C-207ENST00000423701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.69■■■□□ 2.82
SEC22C-207ENST00000423701 KANK1Q14678 1352 aa32.66■■■□□ 2.82
SEC22C-207ENST00000423701 CAMSAP1Q5T5Y3 1602 aa32.65■■■□□ 2.82
SEC22C-207ENST00000423701 LMTK2Q8IWU2 1503 aa32.62■■■□□ 2.81
SEC22C-207ENST00000423701 PZPP20742 1482 aa32.61■■■□□ 2.81
SEC22C-207ENST00000423701 NPATQ14207 1427 aa32.58■■■□□ 2.81
SEC22C-207ENST00000423701 IQGAP3Q86VI3 1631 aa32.57■■■□□ 2.8
SEC22C-207ENST00000423701 EFCAB6Q5THR3 1501 aa32.54■■■□□ 2.8
SEC22C-207ENST00000423701 ARHGAP31Q2M1Z3 1444 aa32.53■■■□□ 2.8
SEC22C-207ENST00000423701 NUP155O75694 1391 aa32.53■■■□□ 2.8
SEC22C-207ENST00000423701 TET3O43151 1660 aa32.52■■■□□ 2.8
SEC22C-207ENST00000423701 PREX1Q8TCU6 1659 aa32.52■■■□□ 2.8
SEC22C-207ENST00000423701 FBXO31Q5XUX0 539 aaPredicted RBP32.49■■■□□ 2.79
SEC22C-207ENST00000423701 SETD5Q9C0A6 1442 aa32.49■■■□□ 2.79
SEC22C-207ENST00000423701 SPATA31D1Q6ZQQ2 1576 aa32.48■■■□□ 2.79
SEC22C-207ENST00000423701 LMTK3Q96Q04 1460 aa32.47■■■□□ 2.79
SEC22C-207ENST00000423701 SETD1BQ9UPS6 1966 aaKnown RBP32.47■■■□□ 2.79
SEC22C-207ENST00000423701 ERVK-7P63135 1459 aa32.47■■■□□ 2.79
SEC22C-207ENST00000423701 MYO3AQ8NEV4 1616 aa32.46■■■□□ 2.79
SEC22C-207ENST00000423701 UHRF1BP1Q6BDS2 1440 aa32.44■■■□□ 2.78
SEC22C-207ENST00000423701 TNRQ92752 1358 aa32.43■■■□□ 2.78
SEC22C-207ENST00000423701 RPRD2Q5VT52 1461 aaKnown RBP32.41■■■□□ 2.78
SEC22C-207ENST00000423701 E9PCH4 1651 aa32.41■■■□□ 2.78
SEC22C-207ENST00000423701 RAB3GAP2Q9H2M9 1393 aa32.41■■■□□ 2.78
SEC22C-207ENST00000423701 CFAP65Q6ZU64 1925 aaKnown RBP32.41■■■□□ 2.78
SEC22C-207ENST00000423701 TRIM52Q96A61 297 aa32.39■■■□□ 2.78
SEC22C-207ENST00000423701 ZNF142P52746 1687 aaPredicted RBP32.38■■■□□ 2.77
SEC22C-207ENST00000423701 TRIM26Q12899 539 aaPredicted RBP32.35■■■□□ 2.77
SEC22C-207ENST00000423701 CEP170BQ9Y4F5 1589 aaPredicted RBP32.35■■■□□ 2.77
SEC22C-207ENST00000423701 NOS1P29475 1434 aa32.34■■■□□ 2.77
SEC22C-207ENST00000423701 SYNMO15061 1565 aa32.33■■■□□ 2.77
SEC22C-207ENST00000423701 NLRP1Q9C000 1473 aa32.32■■■□□ 2.77
SEC22C-207ENST00000423701 A2ML1A8K2U0 1454 aa32.3■■■□□ 2.76
SEC22C-207ENST00000423701 ACIN1Q9UKV3 1341 aaKnown RBP32.28■■■□□ 2.76
SEC22C-207ENST00000423701 HSPA2P54652 639 aa32.28■■■□□ 2.76
SEC22C-207ENST00000423701 SLC4A1APQ9BWU0 796 aaKnown RBP32.26■■■□□ 2.75
SEC22C-207ENST00000423701 SPHKAPQ2M3C7 1700 aa32.23■■■□□ 2.75
SEC22C-207ENST00000423701 HRCP23327 699 aa32.22■■■□□ 2.75
SEC22C-207ENST00000423701 PKD2Q13563 968 aa32.22■■■□□ 2.75
SEC22C-207ENST00000423701 UGGT1Q9NYU2 1555 aa32.21■■■□□ 2.75
SEC22C-207ENST00000423701 PIK3C2BO00750 1634 aa32.21■■■□□ 2.75
SEC22C-207ENST00000423701 MPHOSPH9Q99550 1183 aa32.19■■■□□ 2.74
SEC22C-207ENST00000423701 PTPRTO14522 1441 aa32.18■■■□□ 2.74
SEC22C-207ENST00000423701 UBR1Q8IWV7 1749 aa32.18■■■□□ 2.74
SEC22C-207ENST00000423701 IDI1Q13907 227 aa32.16■■■□□ 2.74
SEC22C-207ENST00000423701 SLC52A1Q9NWF4 448 aa32.15■■■□□ 2.74
SEC22C-207ENST00000423701 TRPM2O94759 1503 aa32.15■■■□□ 2.74
SEC22C-207ENST00000423701 KDM5AP29375 1690 aaKnown RBP32.13■■■□□ 2.73
SEC22C-207ENST00000423701 ADGRB3O60242 1522 aa32.12■■■□□ 2.73
SEC22C-207ENST00000423701 PLA2R1Q13018 1463 aa32.11■■■□□ 2.73
SEC22C-207ENST00000423701 FOXD1Q16676 465 aa32.1■■■□□ 2.73
SEC22C-207ENST00000423701 STRCQ7RTU9 1775 aa32.09■■■□□ 2.73
SEC22C-207ENST00000423701 THEMISQ8N1K5 641 aaPredicted RBP32.08■■■□□ 2.73
SEC22C-207ENST00000423701 CLTCL1P53675 1640 aa32.07■■■□□ 2.72
SEC22C-207ENST00000423701 TMEM131LA2VDJ0 1609 aa32.06■■■□□ 2.72
SEC22C-207ENST00000423701 STAG3Q9UJ98 1225 aa32.03■■■□□ 2.72
SEC22C-207ENST00000423701 MYO5BQ9ULV0 1848 aa32.02■■■□□ 2.72
SEC22C-207ENST00000423701 POLR1AO95602 1720 aaPredicted RBP32.01■■■□□ 2.71
SEC22C-207ENST00000423701 SLIT1O75093 1534 aa32.01■■■□□ 2.71
SEC22C-207ENST00000423701 ARHGAP23Q9P227 1491 aa32■■■□□ 2.71
SEC22C-207ENST00000423701 NCKAP5LQ9HCH0 1330 aa31.97■■■□□ 2.71
SEC22C-207ENST00000423701 TMEM2Q9UHN6 1383 aa31.97■■■□□ 2.71
SEC22C-207ENST00000423701 NEURL4Q96JN8 1562 aa31.96■■■□□ 2.71
SEC22C-207ENST00000423701 CHGAP10645 457 aaKnown RBP31.96■■■□□ 2.71
SEC22C-207ENST00000423701 CCDC144AA2RUR9 1427 aa31.94■■■□□ 2.7
SEC22C-207ENST00000423701 PCGF6Q9BYE7 350 aa31.94■■■□□ 2.7
SEC22C-207ENST00000423701 KIF1BO60333 1816 aa31.93■■■□□ 2.7
SEC22C-207ENST00000423701 ANKLE2Q86XL3 938 aa31.92■■■□□ 2.7
SEC22C-207ENST00000423701 SCAF11Q99590 1463 aaKnown RBP31.91■■■□□ 2.7
SEC22C-207ENST00000423701 ZFYVE9O95405 1425 aa31.89■■■□□ 2.7
SEC22C-207ENST00000423701 ANKRD30BQ9BXX2 1392 aa31.89■■■□□ 2.69
SEC22C-207ENST00000423701 MED14O60244 1454 aa31.88■■■□□ 2.69
SEC22C-207ENST00000423701 LTKP29376 864 aa31.87■■■□□ 2.69
SEC22C-207ENST00000423701 DMRT2Q9Y5R5 561 aa31.86■■■□□ 2.69
SEC22C-207ENST00000423701 RIMS2Q9UQ26 1411 aa31.86■■■□□ 2.69
SEC22C-207ENST00000423701 TXNDC2Q86VQ3 553 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms