RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 IPO9Q96P70 1041 aaKnown RBP19.54■□□□□ 0.72
SHISA9-201ENST00000423335 MAPK8IP3Q9UPT6 1336 aa19.54■□□□□ 0.72
SHISA9-201ENST00000423335 C9orf84Q5VXU9 1444 aa19.54■□□□□ 0.72
SHISA9-201ENST00000423335 NBPF8Q3BBV2 869 aa19.54■□□□□ 0.72
SHISA9-201ENST00000423335 VGFO15240 615 aaPredicted RBP19.52■□□□□ 0.72
SHISA9-201ENST00000423335 USP47Q96K76 1375 aa19.52■□□□□ 0.72
SHISA9-201ENST00000423335 U2AF1L5P0DN76 240 aaPredicted RBP19.51■□□□□ 0.71
SHISA9-201ENST00000423335 U2AF1Q01081 240 aaKnown RBP eCLIP19.51■□□□□ 0.71
SHISA9-201ENST00000423335 ZBED9Q6R2W3 1325 aa19.51■□□□□ 0.71
SHISA9-201ENST00000423335 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
SHISA9-201ENST00000423335 EXOC6Q8TAG9 804 aa19.51■□□□□ 0.71
SHISA9-201ENST00000423335 CCDC146Q8IYE0 955 aa19.5■□□□□ 0.71
SHISA9-201ENST00000423335 HDGFL2Q7Z4V5 671 aaPredicted RBP19.5■□□□□ 0.71
SHISA9-201ENST00000423335 NGDNQ8NEJ9 315 aaKnown RBP19.49■□□□□ 0.71
SHISA9-201ENST00000423335 WDR97A6NE52 1622 aa19.49■□□□□ 0.71
SHISA9-201ENST00000423335 BECN1Q14457 450 aa19.48■□□□□ 0.71
SHISA9-201ENST00000423335 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
SHISA9-201ENST00000423335 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
SHISA9-201ENST00000423335 SLC4A3P48751 1232 aa19.47■□□□□ 0.71
SHISA9-201ENST00000423335 CUL7Q14999 1698 aa19.47■□□□□ 0.71
SHISA9-201ENST00000423335 SPRYD3Q8NCJ5 442 aa19.47■□□□□ 0.71
SHISA9-201ENST00000423335 LTV1Q96GA3 475 aaPredicted RBP19.47■□□□□ 0.71
SHISA9-201ENST00000423335 KIF7Q2M1P5 1343 aa19.47■□□□□ 0.71
SHISA9-201ENST00000423335 EHBP1L1Q8N3D4 1523 aa19.46■□□□□ 0.71
SHISA9-201ENST00000423335 DAPK1P53355 1430 aa19.45■□□□□ 0.7
SHISA9-201ENST00000423335 HECW1Q76N89 1606 aa19.44■□□□□ 0.7
SHISA9-201ENST00000423335 TCERG1O14776 1098 aaKnown RBP19.44■□□□□ 0.7
SHISA9-201ENST00000423335 NAIPQ13075 1403 aa19.44■□□□□ 0.7
SHISA9-201ENST00000423335 RALBP1Q15311 655 aa19.44■□□□□ 0.7
SHISA9-201ENST00000423335 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
SHISA9-201ENST00000423335 NLRP13Q86W25 1043 aa19.43■□□□□ 0.7
SHISA9-201ENST00000423335 CCDC7Q96M83 1385 aa19.42■□□□□ 0.7
SHISA9-201ENST00000423335 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
SHISA9-201ENST00000423335 RRP7AQ9Y3A4 280 aaKnown RBP19.42■□□□□ 0.7
SHISA9-201ENST00000423335 ANP32BQ92688 251 aaKnown RBP19.41■□□□□ 0.7
SHISA9-201ENST00000423335 CD109Q6YHK3 1445 aa19.41■□□□□ 0.7
SHISA9-201ENST00000423335 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.41■□□□□ 0.7
SHISA9-201ENST00000423335 HFM1A2PYH4 1435 aa19.4■□□□□ 0.7
SHISA9-201ENST00000423335 CEBPAP49715 358 aaPredicted RBP19.4■□□□□ 0.7
SHISA9-201ENST00000423335 SLKQ9H2G2 1235 aaPredicted RBP19.4■□□□□ 0.7
SHISA9-201ENST00000423335 SLC26A8Q96RN1 970 aa19.39■□□□□ 0.7
SHISA9-201ENST00000423335 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
SHISA9-201ENST00000423335 PDE4AP27815 886 aa19.39■□□□□ 0.69
SHISA9-201ENST00000423335 CABP2Q9NPB3 220 aa19.39■□□□□ 0.69
SHISA9-201ENST00000423335 TERF2IPQ9NYB0 399 aa19.38■□□□□ 0.69
SHISA9-201ENST00000423335 ABCC5O15440 1437 aa19.38■□□□□ 0.69
SHISA9-201ENST00000423335 FBXO31Q5XUX0 539 aaPredicted RBP19.37■□□□□ 0.69
SHISA9-201ENST00000423335 ATP10BO94823 1461 aa19.36■□□□□ 0.69
SHISA9-201ENST00000423335 RRP1P56182 461 aaKnown RBP19.35■□□□□ 0.69
SHISA9-201ENST00000423335 MSH5O43196 834 aa19.35■□□□□ 0.69
SHISA9-201ENST00000423335 EIF3AQ14152 1382 aaKnown RBP19.35■□□□□ 0.69
SHISA9-201ENST00000423335 NUTM2GQ5VZR2 741 aa19.35■□□□□ 0.69
SHISA9-201ENST00000423335 TXNDC2Q86VQ3 553 aa19.35■□□□□ 0.69
SHISA9-201ENST00000423335 SUPT6HQ7KZ85 1726 aaKnown RBP19.33■□□□□ 0.69
SHISA9-201ENST00000423335 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.69
SHISA9-201ENST00000423335 CLUAP1Q96AJ1 413 aa19.33■□□□□ 0.68
SHISA9-201ENST00000423335 PTPRKQ15262 1439 aa19.32■□□□□ 0.68
SHISA9-201ENST00000423335 CSB-PGBD3P0DP91 1061 aa19.32■□□□□ 0.68
SHISA9-201ENST00000423335 CRBNQ96SW2 442 aa19.32■□□□□ 0.68
SHISA9-201ENST00000423335 CNTLNQ9NXG0 1405 aa19.32■□□□□ 0.68
SHISA9-201ENST00000423335 CENPJQ9HC77 1338 aaPredicted RBP19.32■□□□□ 0.68
SHISA9-201ENST00000423335 C11orf95C9JLR9 678 aaPredicted RBP19.31■□□□□ 0.68
SHISA9-201ENST00000423335 RBM33Q96EV2 1170 aaKnown RBP19.31■□□□□ 0.68
SHISA9-201ENST00000423335 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
SHISA9-201ENST00000423335 NUP153P49790 1475 aaKnown RBP19.31■□□□□ 0.68
SHISA9-201ENST00000423335 CAMSAP2Q08AD1 1489 aa19.31■□□□□ 0.68
SHISA9-201ENST00000423335 AKNAQ7Z591 1439 aa19.3■□□□□ 0.68
SHISA9-201ENST00000423335 GOLGA2Q08379 1002 aa19.29■□□□□ 0.68
SHISA9-201ENST00000423335 EVC2Q86UK5 1308 aa19.29■□□□□ 0.68
SHISA9-201ENST00000423335 CDCA7LQ96GN5 454 aa19.29■□□□□ 0.68
SHISA9-201ENST00000423335 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
SHISA9-201ENST00000423335 SLC12A5Q9H2X9 1139 aa19.29■□□□□ 0.68
SHISA9-201ENST00000423335 GZF1Q9H116 711 aaPredicted RBP19.28■□□□□ 0.68
SHISA9-201ENST00000423335 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
SHISA9-201ENST00000423335 NCOA1Q15788 1441 aa19.28■□□□□ 0.68
SHISA9-201ENST00000423335 ELL2O00472 640 aaPredicted RBP19.28■□□□□ 0.68
SHISA9-201ENST00000423335 NCLP19338 710 aaKnown RBP19.28■□□□□ 0.68
SHISA9-201ENST00000423335 AMPHP49418 695 aa19.28■□□□□ 0.68
SHISA9-201ENST00000423335 PRAM1Q96QH2 718 aa19.27■□□□□ 0.67
SHISA9-201ENST00000423335 TPRNQ4KMQ1 711 aa19.26■□□□□ 0.67
SHISA9-201ENST00000423335 ADGRL1O94910 1474 aa19.26■□□□□ 0.67
SHISA9-201ENST00000423335 PDE3BQ13370 1112 aa19.26■□□□□ 0.67
SHISA9-201ENST00000423335 TRIM44Q96DX7 344 aaPredicted RBP19.26■□□□□ 0.67
SHISA9-201ENST00000423335 MYH16Q9H6N6 1097 aa19.26■□□□□ 0.67
SHISA9-201ENST00000423335 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
SHISA9-201ENST00000423335 PLEKHH2Q8IVE3 1493 aa19.25■□□□□ 0.67
SHISA9-201ENST00000423335 PMFBP1Q8TBY8 1022 aa19.25■□□□□ 0.67
SHISA9-201ENST00000423335 BCL2L13Q9BXK5 485 aa19.24■□□□□ 0.67
SHISA9-201ENST00000423335 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
SHISA9-201ENST00000423335 IDI1Q13907 227 aa19.23■□□□□ 0.67
SHISA9-201ENST00000423335 PTPN23Q9H3S7 1636 aa19.23■□□□□ 0.67
SHISA9-201ENST00000423335 NAP1L5Q96NT1 182 aaPredicted RBP19.22■□□□□ 0.67
SHISA9-201ENST00000423335 ZNF330Q9Y3S2 320 aaPredicted RBP19.22■□□□□ 0.67
SHISA9-201ENST00000423335 APAF1O14727 1248 aa19.22■□□□□ 0.67
SHISA9-201ENST00000423335 RTF1Q92541 710 aaKnown RBP19.21■□□□□ 0.67
SHISA9-201ENST00000423335 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
SHISA9-201ENST00000423335 ASXL2Q76L83 1435 aa19.2■□□□□ 0.66
SHISA9-201ENST00000423335 FANCAO15360 1455 aa19.2■□□□□ 0.66
SHISA9-201ENST00000423335 CCDC9Q9Y3X0 531 aaKnown RBP19.2■□□□□ 0.66
SHISA9-201ENST00000423335 WDR62O43379 1518 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms