RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ARHGEF5Q12774 1597 aa14.41□□□□□ -0.1
NUP50-206ENST00000422489 FAM50AQ14320 339 aaKnown RBP14.39□□□□□ -0.11
NUP50-206ENST00000422489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.39□□□□□ -0.113e-6■□□□□ 11.3
NUP50-206ENST00000422489 SETD1BQ9UPS6 1966 aaKnown RBP14.38□□□□□ -0.11
NUP50-206ENST00000422489 TNRQ92752 1358 aa14.37□□□□□ -0.11
NUP50-206ENST00000422489 MROH2AA6NES4 1674 aa14.37□□□□□ -0.11
NUP50-206ENST00000422489 PPARGC1BQ86YN6 1023 aaKnown RBP14.37□□□□□ -0.11
NUP50-206ENST00000422489 PTPRTO14522 1441 aa14.37□□□□□ -0.11
NUP50-206ENST00000422489 ABCC5O15440 1437 aa14.37□□□□□ -0.11
NUP50-206ENST00000422489 NCOA1Q15788 1441 aa14.36□□□□□ -0.11
NUP50-206ENST00000422489 PKD2Q13563 968 aa14.36□□□□□ -0.11
NUP50-206ENST00000422489 FGD6Q6ZV73 1430 aa14.35□□□□□ -0.11
NUP50-206ENST00000422489 CAMSAP1Q5T5Y3 1602 aa14.35□□□□□ -0.11
NUP50-206ENST00000422489 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
NUP50-206ENST00000422489 STRCQ7RTU9 1775 aa14.34□□□□□ -0.11
NUP50-206ENST00000422489 KDM5DQ9BY66 1539 aa14.33□□□□□ -0.12
NUP50-206ENST00000422489 THEMISQ8N1K5 641 aaPredicted RBP14.33□□□□□ -0.12
NUP50-206ENST00000422489 MAST1Q9Y2H9 1570 aa14.33□□□□□ -0.12
NUP50-206ENST00000422489 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
NUP50-206ENST00000422489 DAPK1P53355 1430 aa14.32□□□□□ -0.12
NUP50-206ENST00000422489 ANKRD30AQ9BXX3 1397 aa14.32□□□□□ -0.12
NUP50-206ENST00000422489 PZPP20742 1482 aa14.31□□□□□ -0.12
NUP50-206ENST00000422489 ANKLE2Q86XL3 938 aa14.31□□□□□ -0.12
NUP50-206ENST00000422489 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
NUP50-206ENST00000422489 DUOX2Q9NRD8 1548 aa14.31□□□□□ -0.12
NUP50-206ENST00000422489 ZNF335Q9H4Z2 1342 aaPredicted RBP14.3□□□□□ -0.12
NUP50-206ENST00000422489 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
NUP50-206ENST00000422489 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
NUP50-206ENST00000422489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.29□□□□□ -0.12
NUP50-206ENST00000422489 MYO3AQ8NEV4 1616 aa14.29□□□□□ -0.12
NUP50-206ENST00000422489 ITGAEP38570 1179 aa14.28□□□□□ -0.12
NUP50-206ENST00000422489 KANK1Q14678 1352 aa14.28□□□□□ -0.12
NUP50-206ENST00000422489 PLA2R1Q13018 1463 aa14.27□□□□□ -0.12
NUP50-206ENST00000422489 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
NUP50-206ENST00000422489 ABCC3O15438 1527 aa14.26□□□□□ -0.13
NUP50-206ENST00000422489 FAM135AQ9P2D6 1515 aa14.26□□□□□ -0.13
NUP50-206ENST00000422489 SHANK2Q9UPX8 1470 aa14.26□□□□□ -0.13
NUP50-206ENST00000422489 ERBINQ96RT1 1412 aa14.25□□□□□ -0.13
NUP50-206ENST00000422489 DNMT1P26358 1616 aaKnown RBP14.24□□□□□ -0.13
NUP50-206ENST00000422489 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
NUP50-206ENST00000422489 NLRP1Q9C000 1473 aa14.24□□□□□ -0.13
NUP50-206ENST00000422489 UBAP1LF5GYI3 381 aa14.23□□□□□ -0.13
NUP50-206ENST00000422489 RNF17Q9BXT8 1623 aaKnown RBP14.23□□□□□ -0.13
NUP50-206ENST00000422489 EIF2AK4Q9P2K8 1649 aaKnown RBP14.23□□□□□ -0.13
NUP50-206ENST00000422489 ERVK-7P63135 1459 aa14.22□□□□□ -0.13
NUP50-206ENST00000422489 UGGT1Q9NYU2 1555 aa14.22□□□□□ -0.13
NUP50-206ENST00000422489 ZNF142P52746 1687 aaPredicted RBP14.21□□□□□ -0.13
NUP50-206ENST00000422489 TXNDC2Q86VQ3 553 aa14.21□□□□□ -0.13
NUP50-206ENST00000422489 LTBP4Q8N2S1 1624 aa14.21□□□□□ -0.13
NUP50-206ENST00000422489 MROH1Q8NDA8 1641 aa14.2□□□□□ -0.14
NUP50-206ENST00000422489 IDI1Q13907 227 aa14.19□□□□□ -0.14
NUP50-206ENST00000422489 EID1Q9Y6B2 187 aa14.19□□□□□ -0.14
NUP50-206ENST00000422489 NPHP4O75161 1426 aaPredicted RBP14.18□□□□□ -0.14
NUP50-206ENST00000422489 ARHGAP31Q2M1Z3 1444 aa14.18□□□□□ -0.14
NUP50-206ENST00000422489 ANKRD50Q9ULJ7 1429 aa14.18□□□□□ -0.14
NUP50-206ENST00000422489 SPATA31D1Q6ZQQ2 1576 aa14.17□□□□□ -0.14
NUP50-206ENST00000422489 CROCC2H7BZ55 1655 aa14.17□□□□□ -0.14
NUP50-206ENST00000422489 LTKP29376 864 aa14.17□□□□□ -0.14
NUP50-206ENST00000422489 ZC3H13Q5T200 1668 aaKnown RBP14.17□□□□□ -0.14
NUP50-206ENST00000422489 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
NUP50-206ENST00000422489 ADGRL2O95490 1459 aa14.16□□□□□ -0.14
NUP50-206ENST00000422489 CEP152O94986 1710 aa14.15□□□□□ -0.14
NUP50-206ENST00000422489 BCANQ96GW7 911 aa14.15□□□□□ -0.14
NUP50-206ENST00000422489 PRDM15P57071 1507 aaPredicted RBP14.15□□□□□ -0.14
NUP50-206ENST00000422489 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
NUP50-206ENST00000422489 IQSEC2Q5JU85 1478 aa14.13□□□□□ -0.15
NUP50-206ENST00000422489 TOM1O60784 492 aa14.13□□□□□ -0.15
NUP50-206ENST00000422489 CHGAP10645 457 aaKnown RBP14.13□□□□□ -0.15
NUP50-206ENST00000422489 SLC52A1Q9NWF4 448 aa14.13□□□□□ -0.15
NUP50-206ENST00000422489 NEURL4Q96JN8 1562 aa14.12□□□□□ -0.15
NUP50-206ENST00000422489 MED14O60244 1454 aa14.12□□□□□ -0.15
NUP50-206ENST00000422489 LMTK2Q8IWU2 1503 aa14.11□□□□□ -0.15
NUP50-206ENST00000422489 ROCK1Q13464 1354 aa14.1□□□□□ -0.15
NUP50-206ENST00000422489 NUP155O75694 1391 aa14.09□□□□□ -0.15
NUP50-206ENST00000422489 CFAP65Q6ZU64 1925 aaKnown RBP14.09□□□□□ -0.15
NUP50-206ENST00000422489 TMEM2Q9UHN6 1383 aa14.09□□□□□ -0.15
NUP50-206ENST00000422489 DEPDC5O75140 1603 aa14.09□□□□□ -0.15
NUP50-206ENST00000422489 SLC26A8Q96RN1 970 aa14.09□□□□□ -0.15
NUP50-206ENST00000422489 SCAF11Q99590 1463 aaKnown RBP14.09□□□□□ -0.15
NUP50-206ENST00000422489 ADRA2BP18089 450 aa14.08□□□□□ -0.16
NUP50-206ENST00000422489 VWDEQ8N2E2 1590 aa14.08□□□□□ -0.16
NUP50-206ENST00000422489 NOS1P29475 1434 aa14.07□□□□□ -0.16
NUP50-206ENST00000422489 CPS1P31327 1500 aa14.07□□□□□ -0.16
NUP50-206ENST00000422489 HDGFP51858 240 aaKnown RBP14.07□□□□□ -0.16
NUP50-206ENST00000422489 DISP3Q9P2K9 1392 aa14.07□□□□□ -0.16
NUP50-206ENST00000422489 POLR1AO95602 1720 aaPredicted RBP14.07□□□□□ -0.16
NUP50-206ENST00000422489 PPP1R15AO75807 674 aaPredicted RBP14.06□□□□□ -0.16
NUP50-206ENST00000422489 ARHGAP23Q9P227 1491 aa14.06□□□□□ -0.16
NUP50-206ENST00000422489 UBR1Q8IWV7 1749 aa14.05□□□□□ -0.16
NUP50-206ENST00000422489 NUTM2DQ5VT03 806 aaPredicted RBP14.05□□□□□ -0.16
NUP50-206ENST00000422489 SLIT1O75093 1534 aa14.05□□□□□ -0.16
NUP50-206ENST00000422489 EFCAB6Q5THR3 1501 aa14.05□□□□□ -0.16
NUP50-206ENST00000422489 PIK3C2BO00750 1634 aa14.04□□□□□ -0.16
NUP50-206ENST00000422489 HSPA1LP34931 641 aa14.04□□□□□ -0.16
NUP50-206ENST00000422489 PROSER2Q86WR7 435 aaPredicted RBP14.03□□□□□ -0.16
NUP50-206ENST00000422489 TRIM52Q96A61 297 aa14.03□□□□□ -0.16
NUP50-206ENST00000422489 SYNMO15061 1565 aa14.03□□□□□ -0.16
NUP50-206ENST00000422489 IQGAP1P46940 1657 aa14.03□□□□□ -0.16
NUP50-206ENST00000422489 RPRD2Q5VT52 1461 aaKnown RBP14.02□□□□□ -0.16
NUP50-206ENST00000422489 KCNA6P17658 529 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms