RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 RTEL1-TNFRSF6BF6WH68 1400 aa10.98□□□□□ -0.65
PMS1-208ENST00000421722 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
PMS1-208ENST00000421722 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.654e-6■■■■□ 23.6
PMS1-208ENST00000421722 PZPP20742 1482 aa10.96□□□□□ -0.65
PMS1-208ENST00000421722 ALKQ9UM73 1620 aa10.96□□□□□ -0.65
PMS1-208ENST00000421722 ANKLE2Q86XL3 938 aa10.96□□□□□ -0.65
PMS1-208ENST00000421722 NLRP1Q9C000 1473 aa10.96□□□□□ -0.66
PMS1-208ENST00000421722 GGT6Q6P531 493 aa10.96□□□□□ -0.66
PMS1-208ENST00000421722 ZNF777Q9ULD5 760 aaPredicted RBP10.96□□□□□ -0.66
PMS1-208ENST00000421722 SYNMO15061 1565 aa10.95□□□□□ -0.66
PMS1-208ENST00000421722 THEMISQ8N1K5 641 aaPredicted RBP10.95□□□□□ -0.66
PMS1-208ENST00000421722 DHX29Q7Z478 1369 aaKnown RBP10.95□□□□□ -0.66
PMS1-208ENST00000421722 NPHP4O75161 1426 aaPredicted RBP10.95□□□□□ -0.66
PMS1-208ENST00000421722 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
PMS1-208ENST00000421722 CFDP1Q9UEE9 299 aaPredicted RBP10.94□□□□□ -0.66
PMS1-208ENST00000421722 KDM5DQ9BY66 1539 aa10.94□□□□□ -0.66
PMS1-208ENST00000421722 CCNB3Q8WWL7 1395 aa10.93□□□□□ -0.66
PMS1-208ENST00000421722 MIA2Q96PC5 1412 aa10.92□□□□□ -0.66
PMS1-208ENST00000421722 IQGAP1P46940 1657 aa10.91□□□□□ -0.66
PMS1-208ENST00000421722 LRRC7Q96NW7 1537 aa10.91□□□□□ -0.66
PMS1-208ENST00000421722 MBD5Q9P267 1494 aa10.9□□□□□ -0.66
PMS1-208ENST00000421722 UGGT1Q9NYU2 1555 aa10.9□□□□□ -0.66
PMS1-208ENST00000421722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.89□□□□□ -0.67
PMS1-208ENST00000421722 RSPH4AQ5TD94 716 aa10.88□□□□□ -0.67
PMS1-208ENST00000421722 FBXO31Q5XUX0 539 aaPredicted RBP10.88□□□□□ -0.67
PMS1-208ENST00000421722 STRCP1A6NGW2 1772 aa10.87□□□□□ -0.67
PMS1-208ENST00000421722 SENP3Q9H4L4 574 aaPredicted RBP10.87□□□□□ -0.67
PMS1-208ENST00000421722 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
PMS1-208ENST00000421722 RGS17Q9UGC6 210 aaPredicted RBP10.86□□□□□ -0.67
PMS1-208ENST00000421722 ZC3H13Q5T200 1668 aaKnown RBP10.86□□□□□ -0.67
PMS1-208ENST00000421722 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
PMS1-208ENST00000421722 KIF3BO15066 747 aa10.86□□□□□ -0.67
PMS1-208ENST00000421722 EHBP1L1Q8N3D4 1523 aa10.85□□□□□ -0.67
PMS1-208ENST00000421722 CCDC141Q6ZP82 1450 aa10.85□□□□□ -0.67
PMS1-208ENST00000421722 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
PMS1-208ENST00000421722 FAM135BQ49AJ0 1406 aa10.84□□□□□ -0.67
PMS1-208ENST00000421722 CEP162Q5TB80 1403 aa10.84□□□□□ -0.67
PMS1-208ENST00000421722 ARHGEF5Q12774 1597 aa10.83□□□□□ -0.68
PMS1-208ENST00000421722 ERVK-7P63135 1459 aa10.82□□□□□ -0.68
PMS1-208ENST00000421722 EHMT2Q96KQ7 1210 aa10.82□□□□□ -0.68
PMS1-208ENST00000421722 ABCC3O15438 1527 aa10.81□□□□□ -0.68
PMS1-208ENST00000421722 SCAF11Q99590 1463 aaKnown RBP10.81□□□□□ -0.68
PMS1-208ENST00000421722 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
PMS1-208ENST00000421722 ZNF644Q9H582 1327 aaPredicted RBP10.81□□□□□ -0.68
PMS1-208ENST00000421722 SLIT1O75093 1534 aa10.81□□□□□ -0.68
PMS1-208ENST00000421722 EIF2AK4Q9P2K8 1649 aaKnown RBP10.81□□□□□ -0.68
PMS1-208ENST00000421722 UBR1Q8IWV7 1749 aa10.8□□□□□ -0.68
PMS1-208ENST00000421722 LRRC9Q6ZRR7 1453 aa10.8□□□□□ -0.68
PMS1-208ENST00000421722 MAST1Q9Y2H9 1570 aa10.8□□□□□ -0.68
PMS1-208ENST00000421722 XIRP1Q702N8 1843 aaKnown RBP10.79□□□□□ -0.68
PMS1-208ENST00000421722 CAMSAP2Q08AD1 1489 aa10.79□□□□□ -0.68
PMS1-208ENST00000421722 NCOA2Q15596 1464 aa10.79□□□□□ -0.68
PMS1-208ENST00000421722 POTEAQ6S8J7 498 aa10.78□□□□□ -0.68
PMS1-208ENST00000421722 ARHGAP31Q2M1Z3 1444 aa10.76□□□□□ -0.69
PMS1-208ENST00000421722 TSPY4P0CV99 314 aa10.75□□□□□ -0.69
PMS1-208ENST00000421722 TSPY10P0CW01 314 aa10.75□□□□□ -0.69
PMS1-208ENST00000421722 KDM5AP29375 1690 aaKnown RBP10.75□□□□□ -0.69
PMS1-208ENST00000421722 EID1Q9Y6B2 187 aa10.75□□□□□ -0.69
PMS1-208ENST00000421722 TXNDC2Q86VQ3 553 aa10.74□□□□□ -0.69
PMS1-208ENST00000421722 MROH1Q8NDA8 1641 aa10.74□□□□□ -0.69
PMS1-208ENST00000421722 KCNA6P17658 529 aa10.73□□□□□ -0.69
PMS1-208ENST00000421722 ROBO1Q9Y6N7 1651 aa10.73□□□□□ -0.69
PMS1-208ENST00000421722 LTKP29376 864 aa10.73□□□□□ -0.69
PMS1-208ENST00000421722 NKTRP30414 1462 aaKnown RBP10.72□□□□□ -0.69
PMS1-208ENST00000421722 NWD1Q149M9 1564 aa10.72□□□□□ -0.69
PMS1-208ENST00000421722 CEP152O94986 1710 aa10.72□□□□□ -0.69
PMS1-208ENST00000421722 MAP3K1Q13233 1512 aa10.72□□□□□ -0.69
PMS1-208ENST00000421722 JCADQ9P266 1359 aa10.72□□□□□ -0.69
PMS1-208ENST00000421722 DUOX2Q9NRD8 1548 aa10.71□□□□□ -0.69
PMS1-208ENST00000421722 TMEM94Q12767 1356 aa10.71□□□□□ -0.69
PMS1-208ENST00000421722 TMEM2Q9UHN6 1383 aa10.71□□□□□ -0.69
PMS1-208ENST00000421722 PRDM15P57071 1507 aaPredicted RBP10.7□□□□□ -0.7
PMS1-208ENST00000421722 SETD1AO15047 1707 aaKnown RBP10.69□□□□□ -0.7
PMS1-208ENST00000421722 PHLPP1O60346 1717 aa10.69□□□□□ -0.7
PMS1-208ENST00000421722 TET3O43151 1660 aa10.69□□□□□ -0.7
PMS1-208ENST00000421722 PIK3C2BO00750 1634 aa10.69□□□□□ -0.7
PMS1-208ENST00000421722 PROSER2Q86WR7 435 aaPredicted RBP10.68□□□□□ -0.7
PMS1-208ENST00000421722 FGD6Q6ZV73 1430 aa10.68□□□□□ -0.7
PMS1-208ENST00000421722 NCOA3Q9Y6Q9 1424 aa10.68□□□□□ -0.7
PMS1-208ENST00000421722 EFCAB6Q5THR3 1501 aa10.67□□□□□ -0.7
PMS1-208ENST00000421722 SPATA31A6Q5VVP1 1343 aa10.67□□□□□ -0.7
PMS1-208ENST00000421722 CDK12Q9NYV4 1490 aaPredicted RBP10.67□□□□□ -0.7
PMS1-208ENST00000421722 ZNF772Q68DY9 489 aaPredicted RBP10.67□□□□□ -0.7
PMS1-208ENST00000421722 UPF1Q92900 1129 aaKnown RBP eCLIP10.67□□□□□ -0.7
PMS1-208ENST00000421722 MSH6P52701 1360 aa10.67□□□□□ -0.7
PMS1-208ENST00000421722 ERBINQ96RT1 1412 aa10.67□□□□□ -0.7
PMS1-208ENST00000421722 LMTK2Q8IWU2 1503 aa10.66□□□□□ -0.7
PMS1-208ENST00000421722 COL16A1Q07092 1604 aaPredicted RBP10.65□□□□□ -0.7
PMS1-208ENST00000421722 MYOM3Q5VTT5 1437 aa10.65□□□□□ -0.71
PMS1-208ENST00000421722 KANK1Q14678 1352 aa10.64□□□□□ -0.71
PMS1-208ENST00000421722 SLAIN2Q9P270 581 aa10.64□□□□□ -0.71
PMS1-208ENST00000421722 STAG3Q9UJ98 1225 aa10.64□□□□□ -0.71
PMS1-208ENST00000421722 SHPRHQ149N8 1683 aa10.64□□□□□ -0.71
PMS1-208ENST00000421722 AHDC1Q5TGY3 1603 aaPredicted RBP10.63□□□□□ -0.71
PMS1-208ENST00000421722 ADGRB3O60242 1522 aa10.63□□□□□ -0.71
PMS1-208ENST00000421722 CFAP65Q6ZU64 1925 aaKnown RBP10.63□□□□□ -0.71
PMS1-208ENST00000421722 NOS1P29475 1434 aa10.62□□□□□ -0.71
PMS1-208ENST00000421722 CHD2O14647 1828 aaKnown RBP10.61□□□□□ -0.71
PMS1-208ENST00000421722 LRP6O75581 1613 aa10.61□□□□□ -0.71
PMS1-208ENST00000421722 KIF15Q9NS87 1388 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms