RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 KDM5DQ9BY66 1539 aa38.66■■■■□ 3.78
SNAPC3-203ENST00000421710 KIF15Q9NS87 1388 aa38.65■■■■□ 3.78
SNAPC3-203ENST00000421710 RNF17Q9BXT8 1623 aaKnown RBP38.64■■■■□ 3.78
SNAPC3-203ENST00000421710 FAM50AQ14320 339 aaKnown RBP38.64■■■■□ 3.78
SNAPC3-203ENST00000421710 HSPA2P54652 639 aa38.61■■■■□ 3.77
SNAPC3-203ENST00000421710 ANKRD30AQ9BXX3 1397 aa38.6■■■■□ 3.77
SNAPC3-203ENST00000421710 ERBINQ96RT1 1412 aa38.59■■■■□ 3.77
SNAPC3-203ENST00000421710 WASHC2CQ9Y4E1 1318 aa38.59■■■■□ 3.77
SNAPC3-203ENST00000421710 RRP7BPQ9NSQ0 103 aa38.56■■■■□ 3.76
SNAPC3-203ENST00000421710 PTPRKQ15262 1439 aa38.55■■■■□ 3.76
SNAPC3-203ENST00000421710 ZC3H13Q5T200 1668 aaKnown RBP38.54■■■■□ 3.76
SNAPC3-203ENST00000421710 CHIC2Q9UKJ5 165 aa38.53■■■■□ 3.76
SNAPC3-203ENST00000421710 ADGRL2O95490 1459 aa38.53■■■■□ 3.76
SNAPC3-203ENST00000421710 NCOA1Q15788 1441 aa38.5■■■■□ 3.75
SNAPC3-203ENST00000421710 PPARGC1BQ86YN6 1023 aaKnown RBP38.49■■■■□ 3.75
SNAPC3-203ENST00000421710 PZPP20742 1482 aa38.48■■■■□ 3.75
SNAPC3-203ENST00000421710 MROH1Q8NDA8 1641 aa38.47■■■■□ 3.75
SNAPC3-203ENST00000421710 ABCC3O15438 1527 aa38.46■■■■□ 3.75
SNAPC3-203ENST00000421710 MYO3AQ8NEV4 1616 aa38.45■■■■□ 3.75
SNAPC3-203ENST00000421710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.44■■■■□ 3.74
SNAPC3-203ENST00000421710 PRDM15P57071 1507 aaPredicted RBP38.43■■■■□ 3.74
SNAPC3-203ENST00000421710 ZNF142P52746 1687 aaPredicted RBP38.42■■■■□ 3.74
SNAPC3-203ENST00000421710 DEPDC5O75140 1603 aa38.4■■■■□ 3.74
SNAPC3-203ENST00000421710 CEP170BQ9Y4F5 1589 aaPredicted RBP38.37■■■■□ 3.73
SNAPC3-203ENST00000421710 CEP152O94986 1710 aa38.36■■■■□ 3.73
SNAPC3-203ENST00000421710 KANK1Q14678 1352 aa38.35■■■■□ 3.73
SNAPC3-203ENST00000421710 TNRQ92752 1358 aa38.35■■■■□ 3.73
SNAPC3-203ENST00000421710 CAMSAP1Q5T5Y3 1602 aa38.34■■■■□ 3.73
SNAPC3-203ENST00000421710 DMRT2Q9Y5R5 561 aa38.33■■■■□ 3.73
SNAPC3-203ENST00000421710 STRCQ7RTU9 1775 aa38.32■■■■□ 3.73
SNAPC3-203ENST00000421710 FBXO31Q5XUX0 539 aaPredicted RBP38.32■■■■□ 3.72
SNAPC3-203ENST00000421710 ROCK1Q13464 1354 aa38.31■■■■□ 3.72
SNAPC3-203ENST00000421710 ANKRD50Q9ULJ7 1429 aa38.3■■■■□ 3.72
SNAPC3-203ENST00000421710 A2ML1A8K2U0 1454 aa38.3■■■■□ 3.72
SNAPC3-203ENST00000421710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.28■■■■□ 3.724e-6■■■□□ 16.3
SNAPC3-203ENST00000421710 RRBP1Q9P2E9 1410 aaKnown RBP38.28■■■■□ 3.72
SNAPC3-203ENST00000421710 SPATA31D1Q6ZQQ2 1576 aa38.25■■■■□ 3.71
SNAPC3-203ENST00000421710 NLRP1Q9C000 1473 aa38.25■■■■□ 3.71
SNAPC3-203ENST00000421710 ARHGAP31Q2M1Z3 1444 aa38.24■■■■□ 3.71
SNAPC3-203ENST00000421710 PLA2R1Q13018 1463 aa38.23■■■■□ 3.71
SNAPC3-203ENST00000421710 VWDEQ8N2E2 1590 aa38.22■■■■□ 3.71
SNAPC3-203ENST00000421710 LMTK2Q8IWU2 1503 aa38.22■■■■□ 3.71
SNAPC3-203ENST00000421710 ERVK-7P63135 1459 aa38.22■■■■□ 3.71
SNAPC3-203ENST00000421710 ITGAEP38570 1179 aa38.21■■■■□ 3.71
SNAPC3-203ENST00000421710 PTPRTO14522 1441 aa38.19■■■■□ 3.7
SNAPC3-203ENST00000421710 PKD2Q13563 968 aa38.13■■■■□ 3.69
SNAPC3-203ENST00000421710 CFAP65Q6ZU64 1925 aaKnown RBP38.11■■■■□ 3.69
SNAPC3-203ENST00000421710 UNC13BO14795 1591 aa38.1■■■■□ 3.69
SNAPC3-203ENST00000421710 UGGT1Q9NYU2 1555 aa38.1■■■■□ 3.69
SNAPC3-203ENST00000421710 EFCAB6Q5THR3 1501 aa38.09■■■■□ 3.69
SNAPC3-203ENST00000421710 THEMISQ8N1K5 641 aaPredicted RBP38.07■■■■□ 3.68
SNAPC3-203ENST00000421710 NCKAP5LQ9HCH0 1330 aa38.05■■■■□ 3.68
SNAPC3-203ENST00000421710 TET3O43151 1660 aa38.01■■■■□ 3.68
SNAPC3-203ENST00000421710 RPRD2Q5VT52 1461 aaKnown RBP38■■■■□ 3.67
SNAPC3-203ENST00000421710 POLR1AO95602 1720 aaPredicted RBP38■■■■□ 3.67
SNAPC3-203ENST00000421710 GCC2Q8IWJ2 1684 aa37.97■■■■□ 3.67
SNAPC3-203ENST00000421710 IQGAP3Q86VI3 1631 aa37.95■■■■□ 3.67
SNAPC3-203ENST00000421710 ANKLE2Q86XL3 938 aa37.94■■■■□ 3.66
SNAPC3-203ENST00000421710 UBR1Q8IWV7 1749 aa37.94■■■■□ 3.66
SNAPC3-203ENST00000421710 NOS1P29475 1434 aa37.92■■■■□ 3.66
SNAPC3-203ENST00000421710 NUP155O75694 1391 aa37.9■■■■□ 3.66
SNAPC3-203ENST00000421710 ILDR1Q86SU0 546 aaPredicted RBP37.89■■■■□ 3.66
SNAPC3-203ENST00000421710 CERKQ8TCT0 537 aa37.89■■■■□ 3.66
SNAPC3-203ENST00000421710 SYNMO15061 1565 aa37.89■■■■□ 3.66
SNAPC3-203ENST00000421710 NEURL4Q96JN8 1562 aa37.89■■■■□ 3.66
SNAPC3-203ENST00000421710 PIK3C2BO00750 1634 aa37.87■■■■□ 3.65
SNAPC3-203ENST00000421710 KDM5AP29375 1690 aaKnown RBP37.87■■■■□ 3.65
SNAPC3-203ENST00000421710 NAIPQ13075 1403 aa37.87■■■■□ 3.65
SNAPC3-203ENST00000421710 FBXO41Q8TF61 875 aa37.85■■■■□ 3.65
SNAPC3-203ENST00000421710 SLC52A1Q9NWF4 448 aa37.84■■■■□ 3.65
SNAPC3-203ENST00000421710 STAG3Q9UJ98 1225 aa37.83■■■■□ 3.65
SNAPC3-203ENST00000421710 HFM1A2PYH4 1435 aa37.83■■■■□ 3.65
SNAPC3-203ENST00000421710 MED14O60244 1454 aa37.83■■■■□ 3.65
SNAPC3-203ENST00000421710 E9PCH4 1651 aa37.81■■■■□ 3.64
SNAPC3-203ENST00000421710 IDI1Q13907 227 aa37.8■■■■□ 3.64
SNAPC3-203ENST00000421710 SLIT1O75093 1534 aa37.8■■■■□ 3.64
SNAPC3-203ENST00000421710 LTBP4Q8N2S1 1624 aa37.79■■■■□ 3.64
SNAPC3-203ENST00000421710 NPHP4O75161 1426 aaPredicted RBP37.78■■■■□ 3.64
SNAPC3-203ENST00000421710 ARHGAP23Q9P227 1491 aa37.78■■■■□ 3.64
SNAPC3-203ENST00000421710 ADGRB3O60242 1522 aa37.76■■■■□ 3.63
SNAPC3-203ENST00000421710 IQGAP1P46940 1657 aa37.76■■■■□ 3.63
SNAPC3-203ENST00000421710 SCAF11Q99590 1463 aaKnown RBP37.75■■■■□ 3.63
SNAPC3-203ENST00000421710 TMEM2Q9UHN6 1383 aa37.72■■■■□ 3.63
SNAPC3-203ENST00000421710 ZNF335Q9H4Z2 1342 aaPredicted RBP37.72■■■■□ 3.63
SNAPC3-203ENST00000421710 EID1Q9Y6B2 187 aa37.72■■■■□ 3.63
SNAPC3-203ENST00000421710 IQSEC2Q5JU85 1478 aa37.7■■■■□ 3.63
SNAPC3-203ENST00000421710 TXNDC2Q86VQ3 553 aa37.68■■■■□ 3.62
SNAPC3-203ENST00000421710 LTKP29376 864 aa37.63■■■■□ 3.61
SNAPC3-203ENST00000421710 CPS1P31327 1500 aa37.6■■■■□ 3.61
SNAPC3-203ENST00000421710 SPHKAPQ2M3C7 1700 aa37.59■■■■□ 3.61
SNAPC3-203ENST00000421710 TRIM52Q96A61 297 aa37.59■■■■□ 3.61
SNAPC3-203ENST00000421710 TMEM131LA2VDJ0 1609 aa37.58■■■■□ 3.61
SNAPC3-203ENST00000421710 MYO5BQ9ULV0 1848 aa37.54■■■■□ 3.6
SNAPC3-203ENST00000421710 HDGFP51858 240 aaKnown RBP37.53■■■■□ 3.6
SNAPC3-203ENST00000421710 CHGAP10645 457 aaKnown RBP37.51■■■■□ 3.6
SNAPC3-203ENST00000421710 ACIN1Q9UKV3 1341 aaKnown RBP37.49■■■■□ 3.59
SNAPC3-203ENST00000421710 ZFYVE9O95405 1425 aa37.48■■■■□ 3.59
SNAPC3-203ENST00000421710 RIMS2Q9UQ26 1411 aa37.47■■■■□ 3.59
SNAPC3-203ENST00000421710 TRPM2O94759 1503 aa37.46■■■■□ 3.59
SNAPC3-203ENST00000421710 SLC4A1APQ9BWU0 796 aaKnown RBP37.46■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms