RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 ANKRD30AQ9BXX3 1397 aa27.35■■□□□ 1.97
MSL3-208ENST00000421368 NCOA1Q15788 1441 aa27.35■■□□□ 1.97
MSL3-208ENST00000421368 RRP7BPQ9NSQ0 103 aa27.35■■□□□ 1.97
MSL3-208ENST00000421368 CEBPAP49715 358 aaPredicted RBP27.34■■□□□ 1.97
MSL3-208ENST00000421368 SETD1BQ9UPS6 1966 aaKnown RBP27.32■■□□□ 1.96
MSL3-208ENST00000421368 MROH1Q8NDA8 1641 aa27.32■■□□□ 1.96
MSL3-208ENST00000421368 ERBINQ96RT1 1412 aa27.32■■□□□ 1.96
MSL3-208ENST00000421368 PPP6R1Q9UPN7 881 aa27.31■■□□□ 1.96
MSL3-208ENST00000421368 FAM135AQ9P2D6 1515 aa27.3■■□□□ 1.96
MSL3-208ENST00000421368 KDM5DQ9BY66 1539 aa27.29■■□□□ 1.96
MSL3-208ENST00000421368 PREX1Q8TCU6 1659 aa27.27■■□□□ 1.96
MSL3-208ENST00000421368 ZMYM3Q14202 1370 aa27.27■■□□□ 1.96
MSL3-208ENST00000421368 DEPDC5O75140 1603 aa27.27■■□□□ 1.96
MSL3-208ENST00000421368 CEP152O94986 1710 aa27.25■■□□□ 1.95
MSL3-208ENST00000421368 ZC3H13Q5T200 1668 aaKnown RBP27.25■■□□□ 1.95
MSL3-208ENST00000421368 ITGAEP38570 1179 aa27.24■■□□□ 1.95
MSL3-208ENST00000421368 LMTK3Q96Q04 1460 aa27.24■■□□□ 1.95
MSL3-208ENST00000421368 PRDM15P57071 1507 aaPredicted RBP27.23■■□□□ 1.95
MSL3-208ENST00000421368 ROCK1Q13464 1354 aa27.22■■□□□ 1.95
MSL3-208ENST00000421368 ABCC3O15438 1527 aa27.21■■□□□ 1.95
MSL3-208ENST00000421368 WASHC2CQ9Y4E1 1318 aa27.2■■□□□ 1.95
MSL3-208ENST00000421368 ANKRD50Q9ULJ7 1429 aa27.18■■□□□ 1.94
MSL3-208ENST00000421368 NPATQ14207 1427 aa27.17■■□□□ 1.94
MSL3-208ENST00000421368 CAMSAP1Q5T5Y3 1602 aa27.16■■□□□ 1.94
MSL3-208ENST00000421368 CFAP65Q6ZU64 1925 aaKnown RBP27.16■■□□□ 1.94
MSL3-208ENST00000421368 PZPP20742 1482 aa27.14■■□□□ 1.94
MSL3-208ENST00000421368 VWDEQ8N2E2 1590 aa27.13■■□□□ 1.93
MSL3-208ENST00000421368 UHRF1BP1Q6BDS2 1440 aa27.12■■□□□ 1.93
MSL3-208ENST00000421368 MYO3AQ8NEV4 1616 aa27.12■■□□□ 1.93
MSL3-208ENST00000421368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.11■■□□□ 1.93
MSL3-208ENST00000421368 UNC13BO14795 1591 aa27.09■■□□□ 1.93
MSL3-208ENST00000421368 GCC2Q8IWJ2 1684 aa27.09■■□□□ 1.93
MSL3-208ENST00000421368 KANK1Q14678 1352 aa27.08■■□□□ 1.93
MSL3-208ENST00000421368 ZNF142P52746 1687 aaPredicted RBP27.08■■□□□ 1.92
MSL3-208ENST00000421368 HSPA2P54652 639 aa27.07■■□□□ 1.92
MSL3-208ENST00000421368 FBXO31Q5XUX0 539 aaPredicted RBP27.07■■□□□ 1.92
MSL3-208ENST00000421368 LMTK2Q8IWU2 1503 aa27.06■■□□□ 1.92
MSL3-208ENST00000421368 SPATA31D1Q6ZQQ2 1576 aa27.02■■□□□ 1.92
MSL3-208ENST00000421368 ARHGAP31Q2M1Z3 1444 aa27.02■■□□□ 1.92
MSL3-208ENST00000421368 CEP170BQ9Y4F5 1589 aaPredicted RBP27.01■■□□□ 1.92
MSL3-208ENST00000421368 NAIPQ13075 1403 aa27.01■■□□□ 1.91
MSL3-208ENST00000421368 TNRQ92752 1358 aa27.01■■□□□ 1.91
MSL3-208ENST00000421368 ERVK-7P63135 1459 aa27■■□□□ 1.91
MSL3-208ENST00000421368 EFCAB6Q5THR3 1501 aa27■■□□□ 1.91
MSL3-208ENST00000421368 TET3O43151 1660 aa26.99■■□□□ 1.91
MSL3-208ENST00000421368 IQGAP3Q86VI3 1631 aa26.98■■□□□ 1.91
MSL3-208ENST00000421368 STRCQ7RTU9 1775 aa26.97■■□□□ 1.91
MSL3-208ENST00000421368 HFM1A2PYH4 1435 aa26.97■■□□□ 1.91
MSL3-208ENST00000421368 A2ML1A8K2U0 1454 aa26.95■■□□□ 1.91
MSL3-208ENST00000421368 NLRP1Q9C000 1473 aa26.92■■□□□ 1.9
MSL3-208ENST00000421368 E9PCH4 1651 aa26.91■■□□□ 1.9
MSL3-208ENST00000421368 NUP155O75694 1391 aa26.89■■□□□ 1.9
MSL3-208ENST00000421368 SYNMO15061 1565 aa26.88■■□□□ 1.89
MSL3-208ENST00000421368 RPRD2Q5VT52 1461 aaKnown RBP26.87■■□□□ 1.89
MSL3-208ENST00000421368 UBR1Q8IWV7 1749 aa26.85■■□□□ 1.89
MSL3-208ENST00000421368 UGGT1Q9NYU2 1555 aa26.84■■□□□ 1.89
MSL3-208ENST00000421368 NOS1P29475 1434 aa26.84■■□□□ 1.89
MSL3-208ENST00000421368 PLA2R1Q13018 1463 aa26.83■■□□□ 1.89
MSL3-208ENST00000421368 PIK3C2BO00750 1634 aa26.82■■□□□ 1.88
MSL3-208ENST00000421368 POLR1AO95602 1720 aaPredicted RBP26.8■■□□□ 1.88
MSL3-208ENST00000421368 KDM5AP29375 1690 aaKnown RBP26.76■■□□□ 1.87
MSL3-208ENST00000421368 SPHKAPQ2M3C7 1700 aa26.75■■□□□ 1.87
MSL3-208ENST00000421368 MYO5BQ9ULV0 1848 aa26.74■■□□□ 1.87
MSL3-208ENST00000421368 NCKAP5LQ9HCH0 1330 aa26.74■■□□□ 1.87
MSL3-208ENST00000421368 THEMISQ8N1K5 641 aaPredicted RBP26.74■■□□□ 1.87
MSL3-208ENST00000421368 IDI1Q13907 227 aa26.72■■□□□ 1.87
MSL3-208ENST00000421368 TRIM52Q96A61 297 aa26.72■■□□□ 1.87
MSL3-208ENST00000421368 PTPRTO14522 1441 aa26.72■■□□□ 1.87
MSL3-208ENST00000421368 SETD5Q9C0A6 1442 aa26.72■■□□□ 1.87
MSL3-208ENST00000421368 NEURL4Q96JN8 1562 aa26.71■■□□□ 1.87
MSL3-208ENST00000421368 DMRT2Q9Y5R5 561 aa26.71■■□□□ 1.87
MSL3-208ENST00000421368 PKD2Q13563 968 aa26.7■■□□□ 1.86
MSL3-208ENST00000421368 ADGRB3O60242 1522 aa26.7■■□□□ 1.86
MSL3-208ENST00000421368 SLC52A1Q9NWF4 448 aa26.69■■□□□ 1.86
MSL3-208ENST00000421368 SLIT1O75093 1534 aa26.66■■□□□ 1.86
MSL3-208ENST00000421368 ARHGAP23Q9P227 1491 aa26.66■■□□□ 1.86
MSL3-208ENST00000421368 TMEM131LA2VDJ0 1609 aa26.65■■□□□ 1.86
MSL3-208ENST00000421368 RAB3GAP2Q9H2M9 1393 aa26.64■■□□□ 1.86
MSL3-208ENST00000421368 ANKLE2Q86XL3 938 aa26.63■■□□□ 1.85
MSL3-208ENST00000421368 STAG3Q9UJ98 1225 aa26.63■■□□□ 1.85
MSL3-208ENST00000421368 SLC4A1APQ9BWU0 796 aaKnown RBP26.62■■□□□ 1.85
MSL3-208ENST00000421368 IQGAP1P46940 1657 aa26.61■■□□□ 1.85
MSL3-208ENST00000421368 MED14O60244 1454 aa26.61■■□□□ 1.85
MSL3-208ENST00000421368 TRPM2O94759 1503 aa26.6■■□□□ 1.85
MSL3-208ENST00000421368 TMEM2Q9UHN6 1383 aa26.59■■□□□ 1.85
MSL3-208ENST00000421368 CLTCL1P53675 1640 aa26.59■■□□□ 1.85
MSL3-208ENST00000421368 SCAF11Q99590 1463 aaKnown RBP26.59■■□□□ 1.85
MSL3-208ENST00000421368 NPHP4O75161 1426 aaPredicted RBP26.57■■□□□ 1.84
MSL3-208ENST00000421368 ACIN1Q9UKV3 1341 aaKnown RBP26.56■■□□□ 1.84
MSL3-208ENST00000421368 KIF1BO60333 1816 aa26.55■■□□□ 1.84
MSL3-208ENST00000421368 LTKP29376 864 aa26.55■■□□□ 1.84
MSL3-208ENST00000421368 MPHOSPH9Q99550 1183 aa26.54■■□□□ 1.84
MSL3-208ENST00000421368 TXNDC2Q86VQ3 553 aa26.53■■□□□ 1.84
MSL3-208ENST00000421368 CHGAP10645 457 aaKnown RBP26.52■■□□□ 1.84
MSL3-208ENST00000421368 LTBP4Q8N2S1 1624 aa26.51■■□□□ 1.83
MSL3-208ENST00000421368 ZFYVE9O95405 1425 aa26.51■■□□□ 1.83
MSL3-208ENST00000421368 FOXD1Q16676 465 aa26.51■■□□□ 1.83
MSL3-208ENST00000421368 EID1Q9Y6B2 187 aa26.51■■□□□ 1.83
MSL3-208ENST00000421368 RIMS2Q9UQ26 1411 aa26.48■■□□□ 1.83
MSL3-208ENST00000421368 ZNF335Q9H4Z2 1342 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms