RNA–Protein interactions for RNA: ENST00000418590.3

SBF1-204, Transcript of SET binding factor 1, humanhuman

TSL 1 (best)

Gene SBF1, Length 1,578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-204ENST00000418590 HECW2Q9P2P5 1572 aa23.51■■□□□ 1.35
SBF1-204ENST00000418590 TRIM52Q96A61 297 aa23.49■■□□□ 1.35
SBF1-204ENST00000418590 ERBINQ96RT1 1412 aa23.49■■□□□ 1.35
SBF1-204ENST00000418590 ABCA6Q8N139 1617 aa23.49■■□□□ 1.35
SBF1-204ENST00000418590 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
SBF1-204ENST00000418590 KIDINS220Q9ULH0 1771 aa23.47■■□□□ 1.35
SBF1-204ENST00000418590 MLH3Q9UHC1 1453 aa23.46■■□□□ 1.35
SBF1-204ENST00000418590 KDM5DQ9BY66 1539 aa23.46■■□□□ 1.35
SBF1-204ENST00000418590 PZPP20742 1482 aa23.45■■□□□ 1.34
SBF1-204ENST00000418590 UNC13BO14795 1591 aa23.43■■□□□ 1.34
SBF1-204ENST00000418590 FER1L4A9Z1Z3 1794 aa23.42■■□□□ 1.34
SBF1-204ENST00000418590 MPHOSPH9Q99550 1183 aa23.42■■□□□ 1.34
SBF1-204ENST00000418590 NUP155O75694 1391 aa23.38■■□□□ 1.33
SBF1-204ENST00000418590 CEBPAP49715 358 aaPredicted RBP23.37■■□□□ 1.33
SBF1-204ENST00000418590 EIF2AK4Q9P2K8 1649 aaKnown RBP23.37■■□□□ 1.33
SBF1-204ENST00000418590 DHX29Q7Z478 1369 aaKnown RBP23.36■■□□□ 1.33
SBF1-204ENST00000418590 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
SBF1-204ENST00000418590 A2MP01023 1474 aa23.34■■□□□ 1.33
SBF1-204ENST00000418590 FAM135AQ9P2D6 1515 aa23.34■■□□□ 1.33
SBF1-204ENST00000418590 DEPDC5O75140 1603 aa23.34■■□□□ 1.33
SBF1-204ENST00000418590 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.33
SBF1-204ENST00000418590 SIN3AQ96ST3 1273 aa23.3■■□□□ 1.32
SBF1-204ENST00000418590 REREQ9P2R6 1566 aa23.3■■□□□ 1.32
SBF1-204ENST00000418590 HSPA2P54652 639 aa23.29■■□□□ 1.32
SBF1-204ENST00000418590 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
SBF1-204ENST00000418590 FOXD1Q16676 465 aa23.27■■□□□ 1.32
SBF1-204ENST00000418590 PRDM15P57071 1507 aaPredicted RBP23.27■■□□□ 1.32
SBF1-204ENST00000418590 LMTK3Q96Q04 1460 aa23.26■■□□□ 1.31
SBF1-204ENST00000418590 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
SBF1-204ENST00000418590 RNF17Q9BXT8 1623 aaKnown RBP23.25■■□□□ 1.31
SBF1-204ENST00000418590 PKD2Q13563 968 aa23.25■■□□□ 1.31
SBF1-204ENST00000418590 AGLP35573 1532 aa23.25■■□□□ 1.31
SBF1-204ENST00000418590 VWDEQ8N2E2 1590 aa23.24■■□□□ 1.31
SBF1-204ENST00000418590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.24■■□□□ 1.31
SBF1-204ENST00000418590 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
SBF1-204ENST00000418590 KIF3BO15066 747 aa23.23■■□□□ 1.31
SBF1-204ENST00000418590 GGT6Q6P531 493 aa23.21■■□□□ 1.31
SBF1-204ENST00000418590 ESF1Q9H501 851 aaKnown RBP23.21■■□□□ 1.31
SBF1-204ENST00000418590 TIMELESSQ9UNS1 1208 aa23.2■■□□□ 1.3
SBF1-204ENST00000418590 C3P01024 1663 aa23.19■■□□□ 1.3
SBF1-204ENST00000418590 KANK1Q14678 1352 aa23.17■■□□□ 1.3
SBF1-204ENST00000418590 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
SBF1-204ENST00000418590 TET3O43151 1660 aa23.16■■□□□ 1.3
SBF1-204ENST00000418590 TONSLQ96HA7 1378 aa23.15■■□□□ 1.3
SBF1-204ENST00000418590 CLTCQ00610 1675 aaKnown RBP23.14■■□□□ 1.3
SBF1-204ENST00000418590 LMTK2Q8IWU2 1503 aa23.14■■□□□ 1.29
SBF1-204ENST00000418590 E9PCH4 1651 aa23.12■■□□□ 1.29
SBF1-204ENST00000418590 PREX1Q8TCU6 1659 aa23.11■■□□□ 1.29
SBF1-204ENST00000418590 EFCAB6Q5THR3 1501 aa23.09■■□□□ 1.29
SBF1-204ENST00000418590 PLA2R1Q13018 1463 aa23.09■■□□□ 1.29
SBF1-204ENST00000418590 CEP152O94986 1710 aa23.08■■□□□ 1.29
SBF1-204ENST00000418590 ZMYM3Q14202 1370 aa23.08■■□□□ 1.28
SBF1-204ENST00000418590 ABCC3O15438 1527 aa23.07■■□□□ 1.28
SBF1-204ENST00000418590 CNTLNQ9NXG0 1405 aa23.06■■□□□ 1.28
SBF1-204ENST00000418590 UHRF1BP1Q6BDS2 1440 aa23.05■■□□□ 1.28
SBF1-204ENST00000418590 SETD1BQ9UPS6 1966 aaKnown RBP23.05■■□□□ 1.28
SBF1-204ENST00000418590 ZC3H13Q5T200 1668 aaKnown RBP23.05■■□□□ 1.28
SBF1-204ENST00000418590 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
SBF1-204ENST00000418590 CCDC144AA2RUR9 1427 aa23.03■■□□□ 1.28
SBF1-204ENST00000418590 TRPM2O94759 1503 aa23.03■■□□□ 1.28
SBF1-204ENST00000418590 PPP1R15AO75807 674 aaPredicted RBP23.03■■□□□ 1.28
SBF1-204ENST00000418590 PTPRTO14522 1441 aa23.03■■□□□ 1.28
SBF1-204ENST00000418590 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
SBF1-204ENST00000418590 CAMSAP1Q5T5Y3 1602 aa23.01■■□□□ 1.27
SBF1-204ENST00000418590 ILDR1Q86SU0 546 aaPredicted RBP23■■□□□ 1.27
SBF1-204ENST00000418590 WASHC2CQ9Y4E1 1318 aa23■■□□□ 1.27
SBF1-204ENST00000418590 L3MBTL2Q969R5 705 aa22.99■■□□□ 1.27
SBF1-204ENST00000418590 NPATQ14207 1427 aa22.98■■□□□ 1.27
SBF1-204ENST00000418590 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
SBF1-204ENST00000418590 STRCQ7RTU9 1775 aa22.96■■□□□ 1.27
SBF1-204ENST00000418590 ARHGAP31Q2M1Z3 1444 aa22.95■■□□□ 1.26
SBF1-204ENST00000418590 CLTCL1P53675 1640 aa22.94■■□□□ 1.26
SBF1-204ENST00000418590 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
SBF1-204ENST00000418590 MYO3AQ8NEV4 1616 aa22.9■■□□□ 1.26
SBF1-204ENST00000418590 NOS1P29475 1434 aa22.88■■□□□ 1.25
SBF1-204ENST00000418590 SPATA31E1Q6ZUB1 1445 aa22.88■■□□□ 1.25
SBF1-204ENST00000418590 CFAP65Q6ZU64 1925 aaKnown RBP22.88■■□□□ 1.25
SBF1-204ENST00000418590 UGGT1Q9NYU2 1555 aa22.88■■□□□ 1.25
SBF1-204ENST00000418590 NEURL4Q96JN8 1562 aa22.86■■□□□ 1.25
SBF1-204ENST00000418590 NCKAP5LQ9HCH0 1330 aa22.86■■□□□ 1.25
SBF1-204ENST00000418590 CEP170BQ9Y4F5 1589 aaPredicted RBP22.84■■□□□ 1.25
SBF1-204ENST00000418590 SYNMO15061 1565 aa22.83■■□□□ 1.25
SBF1-204ENST00000418590 ZNF316A6NFI3 1004 aaPredicted RBP22.83■■□□□ 1.25
SBF1-204ENST00000418590 TNRQ92752 1358 aa22.83■■□□□ 1.24
SBF1-204ENST00000418590 NBPF8Q3BBV2 869 aa22.82■■□□□ 1.24
SBF1-204ENST00000418590 ZNF142P52746 1687 aaPredicted RBP22.81■■□□□ 1.24
SBF1-204ENST00000418590 PIK3C2BO00750 1634 aa22.81■■□□□ 1.24
SBF1-204ENST00000418590 RGL3Q3MIN7 710 aa22.79■■□□□ 1.24
SBF1-204ENST00000418590 ERVK-7P63135 1459 aa22.78■■□□□ 1.24
SBF1-204ENST00000418590 ADGRB3O60242 1522 aa22.78■■□□□ 1.24
SBF1-204ENST00000418590 KIF1BO60333 1816 aa22.78■■□□□ 1.24
SBF1-204ENST00000418590 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
SBF1-204ENST00000418590 A2ML1A8K2U0 1454 aa22.76■■□□□ 1.23
SBF1-204ENST00000418590 DMRT2Q9Y5R5 561 aa22.76■■□□□ 1.23
SBF1-204ENST00000418590 SPATA31D1Q6ZQQ2 1576 aa22.75■■□□□ 1.23
SBF1-204ENST00000418590 PRAG1Q86YV5 1406 aa22.74■■□□□ 1.23
SBF1-204ENST00000418590 RALGAPBQ86X10 1494 aa22.74■■□□□ 1.23
SBF1-204ENST00000418590 CERKQ8TCT0 537 aa22.73■■□□□ 1.23
SBF1-204ENST00000418590 KDM2AQ9Y2K7 1162 aa22.72■■□□□ 1.23
SBF1-204ENST00000418590 ZNF326Q5BKZ1 582 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms