RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
RFC1-203ENST00000418436 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
RFC1-203ENST00000418436 TCOF1Q13428 1488 aaKnown RBP16.32■□□□□ 0.2
RFC1-203ENST00000418436 ARID4BQ4LE39 1312 aaPredicted RBP16.32■□□□□ 0.2
RFC1-203ENST00000418436 AGLP35573 1532 aa16.3■□□□□ 0.2
RFC1-203ENST00000418436 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
RFC1-203ENST00000418436 MAST1Q9Y2H9 1570 aa16.29■□□□□ 0.2
RFC1-203ENST00000418436 PLXNC1O60486 1568 aa16.28■□□□□ 0.2
RFC1-203ENST00000418436 MADDQ8WXG6 1647 aa16.27■□□□□ 0.2
RFC1-203ENST00000418436 TSPY4P0CV99 314 aa16.26■□□□□ 0.19
RFC1-203ENST00000418436 TSPY10P0CW01 314 aa16.26■□□□□ 0.19
RFC1-203ENST00000418436 A2MP01023 1474 aa16.26■□□□□ 0.19
RFC1-203ENST00000418436 CROCC2H7BZ55 1655 aa16.26■□□□□ 0.19
RFC1-203ENST00000418436 DNMT1P26358 1616 aaKnown RBP16.26■□□□□ 0.19
RFC1-203ENST00000418436 ABCC5O15440 1437 aa16.25■□□□□ 0.19
RFC1-203ENST00000418436 PPARGC1BQ86YN6 1023 aaKnown RBP16.24■□□□□ 0.19
RFC1-203ENST00000418436 FER1L4A9Z1Z3 1794 aa16.23■□□□□ 0.19
RFC1-203ENST00000418436 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
RFC1-203ENST00000418436 DAPK1P53355 1430 aa16.23■□□□□ 0.19
RFC1-203ENST00000418436 RIMS1Q86UR5 1692 aaKnown RBP16.23■□□□□ 0.19
RFC1-203ENST00000418436 MLECQ14165 292 aa16.22■□□□□ 0.19
RFC1-203ENST00000418436 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
RFC1-203ENST00000418436 PTPRMP28827 1452 aa16.22■□□□□ 0.19
RFC1-203ENST00000418436 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
RFC1-203ENST00000418436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.17■□□□□ 0.18
RFC1-203ENST00000418436 FAM50AQ14320 339 aaKnown RBP16.17■□□□□ 0.18
RFC1-203ENST00000418436 AKT1S1Q96B36 256 aa16.15■□□□□ 0.18
RFC1-203ENST00000418436 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.18
RFC1-203ENST00000418436 RRBP1Q9P2E9 1410 aaKnown RBP16.14■□□□□ 0.17
RFC1-203ENST00000418436 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
RFC1-203ENST00000418436 ADGRL2O95490 1459 aa16.14■□□□□ 0.17
RFC1-203ENST00000418436 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
RFC1-203ENST00000418436 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
RFC1-203ENST00000418436 NCOA1Q15788 1441 aa16.12■□□□□ 0.17
RFC1-203ENST00000418436 CNTLNQ9NXG0 1405 aa16.12■□□□□ 0.17
RFC1-203ENST00000418436 RNF17Q9BXT8 1623 aaKnown RBP16.12■□□□□ 0.17
RFC1-203ENST00000418436 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
RFC1-203ENST00000418436 C3P01024 1663 aa16.11■□□□□ 0.17
RFC1-203ENST00000418436 PTPRKQ15262 1439 aa16.11■□□□□ 0.17
RFC1-203ENST00000418436 KIF3BO15066 747 aa16.11■□□□□ 0.17
RFC1-203ENST00000418436 GGT6Q6P531 493 aa16.11■□□□□ 0.17
RFC1-203ENST00000418436 CLTCQ00610 1675 aaKnown RBP16.11■□□□□ 0.17
RFC1-203ENST00000418436 RRP7BPQ9NSQ0 103 aa16.1■□□□□ 0.17
RFC1-203ENST00000418436 CHIC2Q9UKJ5 165 aa16.1■□□□□ 0.17
RFC1-203ENST00000418436 ERBINQ96RT1 1412 aa16.1■□□□□ 0.17
RFC1-203ENST00000418436 FAM135AQ9P2D6 1515 aa16.09■□□□□ 0.17
RFC1-203ENST00000418436 ESF1Q9H501 851 aaKnown RBP16.09■□□□□ 0.17
RFC1-203ENST00000418436 SPDYE2BA6NHP3 402 aa16.08■□□□□ 0.16
RFC1-203ENST00000418436 SPDYE6P0CI01 402 aa16.08■□□□□ 0.16
RFC1-203ENST00000418436 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.16
RFC1-203ENST00000418436 MROH1Q8NDA8 1641 aa16.08■□□□□ 0.16
RFC1-203ENST00000418436 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
RFC1-203ENST00000418436 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
RFC1-203ENST00000418436 ZMYM3Q14202 1370 aa16.06■□□□□ 0.16
RFC1-203ENST00000418436 SETD1BQ9UPS6 1966 aaKnown RBP16.06■□□□□ 0.16
RFC1-203ENST00000418436 DEPDC5O75140 1603 aa16.05■□□□□ 0.16
RFC1-203ENST00000418436 KDM5DQ9BY66 1539 aa16.05■□□□□ 0.16
RFC1-203ENST00000418436 ZC3H13Q5T200 1668 aaKnown RBP16.04■□□□□ 0.16
RFC1-203ENST00000418436 PRDM15P57071 1507 aaPredicted RBP16.03■□□□□ 0.16
RFC1-203ENST00000418436 PREX1Q8TCU6 1659 aa16.02■□□□□ 0.16
RFC1-203ENST00000418436 WASHC2CQ9Y4E1 1318 aa16.01■□□□□ 0.15
RFC1-203ENST00000418436 ABCC3O15438 1527 aa16.01■□□□□ 0.15
RFC1-203ENST00000418436 ITGAEP38570 1179 aa16.01■□□□□ 0.15
RFC1-203ENST00000418436 LMTK3Q96Q04 1460 aa16.01■□□□□ 0.15
RFC1-203ENST00000418436 NPATQ14207 1427 aa16.01■□□□□ 0.15
RFC1-203ENST00000418436 ANKRD50Q9ULJ7 1429 aa16.01■□□□□ 0.15
RFC1-203ENST00000418436 CEP152O94986 1710 aa16■□□□□ 0.15
RFC1-203ENST00000418436 VWDEQ8N2E2 1590 aa15.99■□□□□ 0.15
RFC1-203ENST00000418436 CAMSAP1Q5T5Y3 1602 aa15.97■□□□□ 0.15
RFC1-203ENST00000418436 PZPP20742 1482 aa15.97■□□□□ 0.15
RFC1-203ENST00000418436 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
RFC1-203ENST00000418436 UNC13BO14795 1591 aa15.96■□□□□ 0.14
RFC1-203ENST00000418436 LMTK2Q8IWU2 1503 aa15.95■□□□□ 0.14
RFC1-203ENST00000418436 UHRF1BP1Q6BDS2 1440 aa15.94■□□□□ 0.14
RFC1-203ENST00000418436 KANK1Q14678 1352 aa15.94■□□□□ 0.14
RFC1-203ENST00000418436 GCC2Q8IWJ2 1684 aa15.94■□□□□ 0.14
RFC1-203ENST00000418436 POTEHQ6S545 545 aa15.93■□□□□ 0.14
RFC1-203ENST00000418436 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
RFC1-203ENST00000418436 NAIPQ13075 1403 aa15.93■□□□□ 0.14
RFC1-203ENST00000418436 ARHGAP31Q2M1Z3 1444 aa15.93■□□□□ 0.14
RFC1-203ENST00000418436 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
RFC1-203ENST00000418436 MYO3AQ8NEV4 1616 aa15.92■□□□□ 0.14
RFC1-203ENST00000418436 SSUH2Q9Y2M2 353 aa15.91■□□□□ 0.14
RFC1-203ENST00000418436 ZNF142P52746 1687 aaPredicted RBP15.91■□□□□ 0.14
RFC1-203ENST00000418436 SPATA31D1Q6ZQQ2 1576 aa15.91■□□□□ 0.14
RFC1-203ENST00000418436 CFAP65Q6ZU64 1925 aaKnown RBP15.9■□□□□ 0.14
RFC1-203ENST00000418436 ZNF692Q9BU19 519 aaPredicted RBP15.9■□□□□ 0.14
RFC1-203ENST00000418436 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
RFC1-203ENST00000418436 HSPA2P54652 639 aa15.89■□□□□ 0.13
RFC1-203ENST00000418436 IQGAP3Q86VI3 1631 aa15.89■□□□□ 0.13
RFC1-203ENST00000418436 ERVK-7P63135 1459 aa15.89■□□□□ 0.13
RFC1-203ENST00000418436 TET3O43151 1660 aa15.89■□□□□ 0.13
RFC1-203ENST00000418436 EFCAB6Q5THR3 1501 aa15.89■□□□□ 0.13
RFC1-203ENST00000418436 TNRQ92752 1358 aa15.88■□□□□ 0.13
RFC1-203ENST00000418436 CEP170BQ9Y4F5 1589 aaPredicted RBP15.87■□□□□ 0.13
RFC1-203ENST00000418436 A2ML1A8K2U0 1454 aa15.85■□□□□ 0.13
RFC1-203ENST00000418436 STRCQ7RTU9 1775 aa15.85■□□□□ 0.13
RFC1-203ENST00000418436 RPRD2Q5VT52 1461 aaKnown RBP15.84■□□□□ 0.13
RFC1-203ENST00000418436 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
RFC1-203ENST00000418436 NUP155O75694 1391 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms