RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
UBR3-203ENST00000418381 FYB1O15117 783 aa22.02■■□□□ 1.12
UBR3-203ENST00000418381 TMEM132AQ24JP5 1023 aa22.02■■□□□ 1.12
UBR3-203ENST00000418381 FOXD4L6Q3SYB3 417 aaPredicted RBP22.02■■□□□ 1.11
UBR3-203ENST00000418381 FOXD4L3Q6VB84 417 aaPredicted RBP22.02■■□□□ 1.11
UBR3-203ENST00000418381 SMC4Q9NTJ3 1288 aa22.02■■□□□ 1.11
UBR3-203ENST00000418381 KAT6BQ8WYB5 2073 aa22.01■■□□□ 1.11
UBR3-203ENST00000418381 VSIG10Q8N0Z9 540 aa22.01■■□□□ 1.11
UBR3-203ENST00000418381 SYAP1Q96A49 352 aaPredicted RBP22.01■■□□□ 1.11
UBR3-203ENST00000418381 RBM33Q96EV2 1170 aaKnown RBP22.01■■□□□ 1.11
UBR3-203ENST00000418381 FOXD1Q16676 465 aa22.01■■□□□ 1.11
UBR3-203ENST00000418381 KIF16BQ96L93 1317 aa22.01■■□□□ 1.11
UBR3-203ENST00000418381 RILPL2Q969X0 211 aa22■■□□□ 1.11
UBR3-203ENST00000418381 GBP4Q96PP9 640 aa21.99■■□□□ 1.11
UBR3-203ENST00000418381 MTMR7Q9Y216 660 aa21.99■■□□□ 1.11
UBR3-203ENST00000418381 SLKQ9H2G2 1235 aaPredicted RBP21.99■■□□□ 1.11
UBR3-203ENST00000418381 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
UBR3-203ENST00000418381 SF3B2Q13435 895 aaKnown RBP21.98■■□□□ 1.11
UBR3-203ENST00000418381 SYNE3Q6ZMZ3 975 aa21.98■■□□□ 1.11
UBR3-203ENST00000418381 NECTIN2Q92692 538 aa21.98■■□□□ 1.11
UBR3-203ENST00000418381 MCTP1Q6DN14 999 aa21.98■■□□□ 1.11
UBR3-203ENST00000418381 CCDC146Q8IYE0 955 aa21.98■■□□□ 1.11
UBR3-203ENST00000418381 R3HCC1Q9Y3T6 440 aaKnown RBP21.97■■□□□ 1.11
UBR3-203ENST00000418381 TTC5Q8N0Z6 440 aa21.97■■□□□ 1.11
UBR3-203ENST00000418381 FAM184AQ8NB25 1140 aa21.97■■□□□ 1.11
UBR3-203ENST00000418381 ODF2Q5BJF6 829 aa21.96■■□□□ 1.11
UBR3-203ENST00000418381 IKQ13123 557 aaPredicted RBP21.95■■□□□ 1.11
UBR3-203ENST00000418381 PPP4R2Q9NY27 417 aa21.95■■□□□ 1.1
UBR3-203ENST00000418381 CSPP1Q1MSJ5 1256 aa21.95■■□□□ 1.1
UBR3-203ENST00000418381 HMMRO75330 724 aa21.94■■□□□ 1.1
UBR3-203ENST00000418381 EIF2S2P20042 333 aaKnown RBP21.94■■□□□ 1.1
UBR3-203ENST00000418381 ZFYVE27Q5T4F4 411 aa21.94■■□□□ 1.1
UBR3-203ENST00000418381 CHMP4AQ9BY43 222 aa21.94■■□□□ 1.1
UBR3-203ENST00000418381 HDAC5Q9UQL6 1122 aa21.93■■□□□ 1.1
UBR3-203ENST00000418381 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
UBR3-203ENST00000418381 IBSPP21815 317 aaPredicted RBP21.92■■□□□ 1.1
UBR3-203ENST00000418381 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
UBR3-203ENST00000418381 WWC2Q6AWC2 1192 aa21.91■■□□□ 1.1
UBR3-203ENST00000418381 CT47A1Q5JQC4 288 aaPredicted RBP21.91■■□□□ 1.1
UBR3-203ENST00000418381 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
UBR3-203ENST00000418381 PPM1FP49593 454 aaPredicted RBP21.9■■□□□ 1.1
UBR3-203ENST00000418381 PSME1Q06323 249 aa21.9■■□□□ 1.1
UBR3-203ENST00000418381 KTN1Q86UP2 1357 aaKnown RBP21.9■■□□□ 1.1
UBR3-203ENST00000418381 TERF2IPQ9NYB0 399 aa21.9■■□□□ 1.1
UBR3-203ENST00000418381 CCDC27Q2M243 656 aa21.9■■□□□ 1.1
UBR3-203ENST00000418381 CLUAP1Q96AJ1 413 aa21.9■■□□□ 1.1
UBR3-203ENST00000418381 KIF3BO15066 747 aa21.89■■□□□ 1.1
UBR3-203ENST00000418381 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
UBR3-203ENST00000418381 FOSBP53539 338 aa21.88■■□□□ 1.09
UBR3-203ENST00000418381 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
UBR3-203ENST00000418381 TRIM29Q14134 588 aa21.87■■□□□ 1.09
UBR3-203ENST00000418381 USP35Q9P2H5 1018 aa21.86■■□□□ 1.09
UBR3-203ENST00000418381 NFXL1Q6ZNB6 911 aa21.86■■□□□ 1.09
UBR3-203ENST00000418381 TPM1P09493 284 aa21.86■■□□□ 1.09
UBR3-203ENST00000418381 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
UBR3-203ENST00000418381 PLIN1O60240 522 aa21.85■■□□□ 1.09
UBR3-203ENST00000418381 KIF3AQ9Y496 699 aa21.85■■□□□ 1.09
UBR3-203ENST00000418381 KDM4AO75164 1064 aa21.84■■□□□ 1.09
UBR3-203ENST00000418381 NAP1L1P55209 391 aaKnown RBP21.84■■□□□ 1.09
UBR3-203ENST00000418381 C9orf78Q9NZ63 289 aaPredicted RBP21.84■■□□□ 1.09
UBR3-203ENST00000418381 FAM177BA6PVY3 158 aa21.84■■□□□ 1.09
UBR3-203ENST00000418381 KIF27Q86VH2 1401 aa21.83■■□□□ 1.09
UBR3-203ENST00000418381 SETQ01105 290 aaPredicted RBP21.83■■□□□ 1.09
UBR3-203ENST00000418381 TEFQ10587 303 aa21.83■■□□□ 1.09
UBR3-203ENST00000418381 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.83■■□□□ 1.09
UBR3-203ENST00000418381 ELL2O00472 640 aaPredicted RBP21.83■■□□□ 1.09
UBR3-203ENST00000418381 PKD2Q13563 968 aa21.83■■□□□ 1.08
UBR3-203ENST00000418381 WDR70Q9NW82 654 aa21.82■■□□□ 1.08
UBR3-203ENST00000418381 PTMSP20962 102 aa21.81■■□□□ 1.08
UBR3-203ENST00000418381 NEXNQ0ZGT2 675 aa21.81■■□□□ 1.08
UBR3-203ENST00000418381 CCDC70Q6NSX1 233 aa21.81■■□□□ 1.08
UBR3-203ENST00000418381 EPS15P42566 896 aa21.81■■□□□ 1.08
UBR3-203ENST00000418381 GOLGA6L19H0YKK7 550 aa21.81■■□□□ 1.08
UBR3-203ENST00000418381 EIF3AQ14152 1382 aaKnown RBP21.81■■□□□ 1.08
UBR3-203ENST00000418381 ERICH2A1L162 156 aa21.81■■□□□ 1.08
UBR3-203ENST00000418381 TRAK1Q9UPV9 953 aa21.8■■□□□ 1.08
UBR3-203ENST00000418381 RRP12Q5JTH9 1297 aaKnown RBP21.8■■□□□ 1.08
UBR3-203ENST00000418381 RRP7AQ9Y3A4 280 aaKnown RBP21.79■■□□□ 1.08
UBR3-203ENST00000418381 ATF3P18847 181 aa21.79■■□□□ 1.08
UBR3-203ENST00000418381 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
UBR3-203ENST00000418381 CCDC47Q96A33 483 aaKnown RBP21.78■■□□□ 1.08
UBR3-203ENST00000418381 HSP90AB2PQ58FF8 381 aa21.77■■□□□ 1.08
UBR3-203ENST00000418381 PMFBP1Q8TBY8 1022 aa21.77■■□□□ 1.08
UBR3-203ENST00000418381 NUTM2BA6NNL0 878 aaPredicted RBP21.77■■□□□ 1.07
UBR3-203ENST00000418381 NUTM2EB1AL46 878 aaPredicted RBP21.77■■□□□ 1.07
UBR3-203ENST00000418381 NUTM2AQ8IVF1 878 aaPredicted RBP21.77■■□□□ 1.07
UBR3-203ENST00000418381 PHF14O94880 888 aa21.76■■□□□ 1.07
UBR3-203ENST00000418381 LMOD3Q0VAK6 560 aa21.76■■□□□ 1.07
UBR3-203ENST00000418381 ST18O60284 1047 aa21.75■■□□□ 1.07
UBR3-203ENST00000418381 LRRFIP1Q32MZ4 808 aaKnown RBP21.75■■□□□ 1.07
UBR3-203ENST00000418381 PIP4K2BP78356 416 aa21.74■■□□□ 1.07
UBR3-203ENST00000418381 PAXIP1Q6ZW49 1069 aaPredicted RBP21.74■■□□□ 1.07
UBR3-203ENST00000418381 ZNF592Q92610 1267 aa21.74■■□□□ 1.07
UBR3-203ENST00000418381 HNRNPMP52272 730 aaKnown RBP eCLIP21.73■■□□□ 1.076e-7■■■■■ 33.7
UBR3-203ENST00000418381 CCDC97Q96F63 343 aaPredicted RBP21.73■■□□□ 1.07
UBR3-203ENST00000418381 CEP162Q5TB80 1403 aa21.73■■□□□ 1.07
UBR3-203ENST00000418381 TRDNQ13061 729 aa21.73■■□□□ 1.07
UBR3-203ENST00000418381 COG3Q96JB2 828 aa21.73■■□□□ 1.07
UBR3-203ENST00000418381 BECN2A8MW95 431 aa21.72■■□□□ 1.07
UBR3-203ENST00000418381 ATP2B2Q01814 1243 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms