RNA–Protein interactions for RNA: ENST00000415807.6

FNDC3B-202, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-202ENST00000415807 CDCA8Q53HL2 280 aa15.6■□□□□ 0.09
FNDC3B-202ENST00000415807 KIF14Q15058 1648 aa15.6■□□□□ 0.09
FNDC3B-202ENST00000415807 CCDC141Q6ZP82 1450 aa15.57■□□□□ 0.08
FNDC3B-202ENST00000415807 SRPK2P78362 688 aaKnown RBP15.56■□□□□ 0.08
FNDC3B-202ENST00000415807 CFAP70Q5T0N1 1121 aa15.56■□□□□ 0.08
FNDC3B-202ENST00000415807 TMEM132EQ6IEE7 984 aa15.56■□□□□ 0.08
FNDC3B-202ENST00000415807 PLEKHH2Q8IVE3 1493 aa15.56■□□□□ 0.08
FNDC3B-202ENST00000415807 KTN1Q86UP2 1357 aaKnown RBP15.55■□□□□ 0.08
FNDC3B-202ENST00000415807 SLC24A1O60721 1099 aa15.54■□□□□ 0.08
FNDC3B-202ENST00000415807 TCOF1Q13428 1488 aaKnown RBP15.54■□□□□ 0.08
FNDC3B-202ENST00000415807 NPM2Q86SE8 214 aaKnown RBP15.52■□□□□ 0.08
FNDC3B-202ENST00000415807 CNTLNQ9NXG0 1405 aa15.52■□□□□ 0.08
FNDC3B-202ENST00000415807 RPRD2Q5VT52 1461 aaKnown RBP15.51■□□□□ 0.07
FNDC3B-202ENST00000415807 KDM6BO15054 1643 aa15.5■□□□□ 0.07
FNDC3B-202ENST00000415807 CCDC146Q8IYE0 955 aa15.49■□□□□ 0.07
FNDC3B-202ENST00000415807 RALBP1Q15311 655 aa15.49■□□□□ 0.07
FNDC3B-202ENST00000415807 SYCP2Q9BX26 1530 aa15.48■□□□□ 0.07
FNDC3B-202ENST00000415807 NEFMP07197 916 aa15.48■□□□□ 0.07
FNDC3B-202ENST00000415807 SOX12O15370 315 aa15.48■□□□□ 0.07
FNDC3B-202ENST00000415807 NUTM2FA1L443 756 aa15.48■□□□□ 0.07
FNDC3B-202ENST00000415807 MORC1Q86VD1 984 aa15.48■□□□□ 0.07
FNDC3B-202ENST00000415807 NLRP13Q86W25 1043 aa15.47■□□□□ 0.07
FNDC3B-202ENST00000415807 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
FNDC3B-202ENST00000415807 TRAPPC8Q9Y2L5 1435 aa15.46■□□□□ 0.07
FNDC3B-202ENST00000415807 MYBBP1AQ9BQG0 1328 aaKnown RBP15.44■□□□□ 0.06
FNDC3B-202ENST00000415807 ERCC6L2Q5T890 1561 aa15.43■□□□□ 0.06
FNDC3B-202ENST00000415807 CD109Q6YHK3 1445 aa15.43■□□□□ 0.06
FNDC3B-202ENST00000415807 ADGRL1O94910 1474 aa15.43■□□□□ 0.06
FNDC3B-202ENST00000415807 MINK1Q8N4C8 1332 aaPredicted RBP15.42■□□□□ 0.06
FNDC3B-202ENST00000415807 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
FNDC3B-202ENST00000415807 FANCAO15360 1455 aa15.42■□□□□ 0.06
FNDC3B-202ENST00000415807 DAXXQ9UER7 740 aaPredicted RBP15.42■□□□□ 0.06
FNDC3B-202ENST00000415807 PPP4R2Q9NY27 417 aa15.42■□□□□ 0.06
FNDC3B-202ENST00000415807 PZPP20742 1482 aa15.41■□□□□ 0.06
FNDC3B-202ENST00000415807 DNMT1P26358 1616 aaKnown RBP15.41■□□□□ 0.06
FNDC3B-202ENST00000415807 PLCH2O75038 1416 aa15.41■□□□□ 0.06
FNDC3B-202ENST00000415807 ZBTB7CA1YPR0 619 aa15.4■□□□□ 0.06
FNDC3B-202ENST00000415807 ASXL2Q76L83 1435 aa15.4■□□□□ 0.06
FNDC3B-202ENST00000415807 ITSN2Q9NZM3 1697 aa15.4■□□□□ 0.06
FNDC3B-202ENST00000415807 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
FNDC3B-202ENST00000415807 LRRIQ1Q96JM4 1722 aa15.39■□□□□ 0.05
FNDC3B-202ENST00000415807 VGFO15240 615 aaPredicted RBP15.38■□□□□ 0.05
FNDC3B-202ENST00000415807 RRP7AQ9Y3A4 280 aaKnown RBP15.38■□□□□ 0.05
FNDC3B-202ENST00000415807 FRAT1Q92837 279 aaPredicted RBP15.38■□□□□ 0.05
FNDC3B-202ENST00000415807 EIF3AQ14152 1382 aaKnown RBP15.38■□□□□ 0.05
FNDC3B-202ENST00000415807 NUDCQ9Y266 331 aa15.38■□□□□ 0.05
FNDC3B-202ENST00000415807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.37■□□□□ 0.059e-8■■□□□ 12.4
FNDC3B-202ENST00000415807 LAS1LQ9Y4W2 734 aaKnown RBP15.37■□□□□ 0.05
FNDC3B-202ENST00000415807 PLIN1O60240 522 aa15.37■□□□□ 0.05
FNDC3B-202ENST00000415807 ADGRF5Q8IZF2 1346 aa15.36■□□□□ 0.05
FNDC3B-202ENST00000415807 ZBED9Q6R2W3 1325 aa15.36■□□□□ 0.05
FNDC3B-202ENST00000415807 CABP2Q9NPB3 220 aa15.36■□□□□ 0.05
FNDC3B-202ENST00000415807 RCAN3Q9UKA8 241 aa15.36■□□□□ 0.05
FNDC3B-202ENST00000415807 CHD1O14646 1710 aa15.35■□□□□ 0.05
FNDC3B-202ENST00000415807 U2AF1L5P0DN76 240 aaPredicted RBP15.35■□□□□ 0.05
FNDC3B-202ENST00000415807 U2AF1Q01081 240 aaKnown RBP eCLIP15.35■□□□□ 0.054e-10■■□□□ 13.6
FNDC3B-202ENST00000415807 ABCC2Q92887 1545 aa15.35■□□□□ 0.05
FNDC3B-202ENST00000415807 SLC12A5Q9H2X9 1139 aa15.35■□□□□ 0.05
FNDC3B-202ENST00000415807 CENPJQ9HC77 1338 aaPredicted RBP15.35■□□□□ 0.05
FNDC3B-202ENST00000415807 TSHZ2Q9NRE2 1034 aa15.34■□□□□ 0.05
FNDC3B-202ENST00000415807 FBXO31Q5XUX0 539 aaPredicted RBP15.34■□□□□ 0.05
FNDC3B-202ENST00000415807 ABCA8O94911 1581 aa15.34■□□□□ 0.05
FNDC3B-202ENST00000415807 CDCA7LQ96GN5 454 aa15.34■□□□□ 0.05
FNDC3B-202ENST00000415807 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
FNDC3B-202ENST00000415807 ERBINQ96RT1 1412 aa15.33■□□□□ 0.04
FNDC3B-202ENST00000415807 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.32■□□□□ 0.04
FNDC3B-202ENST00000415807 PNISRQ8TF01 805 aaKnown RBP15.32■□□□□ 0.04
FNDC3B-202ENST00000415807 ADAMTS8Q9UP79 889 aa15.32■□□□□ 0.04
FNDC3B-202ENST00000415807 FAM135AQ9P2D6 1515 aa15.31■□□□□ 0.04
FNDC3B-202ENST00000415807 APAF1O14727 1248 aa15.31■□□□□ 0.04
FNDC3B-202ENST00000415807 WDR7Q9Y4E6 1490 aa15.31■□□□□ 0.04
FNDC3B-202ENST00000415807 MBD5Q9P267 1494 aa15.3■□□□□ 0.04
FNDC3B-202ENST00000415807 LMOD2Q6P5Q4 547 aa15.29■□□□□ 0.04
FNDC3B-202ENST00000415807 MAPK8IP3Q9UPT6 1336 aa15.29■□□□□ 0.04
FNDC3B-202ENST00000415807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.29■□□□□ 0.041e-14■□□□□ 11
FNDC3B-202ENST00000415807 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
FNDC3B-202ENST00000415807 IDI1Q13907 227 aa15.28■□□□□ 0.04
FNDC3B-202ENST00000415807 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
FNDC3B-202ENST00000415807 DISP3Q9P2K9 1392 aa15.28■□□□□ 0.04
FNDC3B-202ENST00000415807 GGNBP2Q9H3C7 697 aa15.27■□□□□ 0.04
FNDC3B-202ENST00000415807 DHX29Q7Z478 1369 aaKnown RBP15.27■□□□□ 0.04
FNDC3B-202ENST00000415807 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.04
FNDC3B-202ENST00000415807 RGS3P49796 1198 aa15.27■□□□□ 0.03
FNDC3B-202ENST00000415807 CFAP65Q6ZU64 1925 aaKnown RBP15.26■□□□□ 0.03
FNDC3B-202ENST00000415807 TEX14Q8IWB6 1497 aa15.26■□□□□ 0.03
FNDC3B-202ENST00000415807 EVC2Q86UK5 1308 aa15.26■□□□□ 0.03
FNDC3B-202ENST00000415807 ADGRL2O95490 1459 aa15.25■□□□□ 0.03
FNDC3B-202ENST00000415807 PPP2R1AP30153 589 aa15.25■□□□□ 0.03
FNDC3B-202ENST00000415807 DENND4BO75064 1496 aaPredicted RBP15.25■□□□□ 0.03
FNDC3B-202ENST00000415807 GCC2Q8IWJ2 1684 aa15.25■□□□□ 0.03
FNDC3B-202ENST00000415807 GOLGA2Q08379 1002 aa15.24■□□□□ 0.03
FNDC3B-202ENST00000415807 PRAM1Q96QH2 718 aa15.24■□□□□ 0.03
FNDC3B-202ENST00000415807 EXOC6Q8TAG9 804 aa15.24■□□□□ 0.03
FNDC3B-202ENST00000415807 BCL2L13Q9BXK5 485 aa15.24■□□□□ 0.03
FNDC3B-202ENST00000415807 TTC37Q6PGP7 1564 aa15.24■□□□□ 0.03
FNDC3B-202ENST00000415807 HDGFP51858 240 aaKnown RBP15.23■□□□□ 0.03
FNDC3B-202ENST00000415807 TERF2IPQ9NYB0 399 aa15.23■□□□□ 0.03
FNDC3B-202ENST00000415807 SHANK2Q9UPX8 1470 aa15.23■□□□□ 0.03
FNDC3B-202ENST00000415807 KDM5BQ9UGL1 1544 aa15.22■□□□□ 0.03
FNDC3B-202ENST00000415807 SAMD9LQ8IVG5 1584 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms