RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 CEP152O94986 1710 aa19.63■□□□□ 0.73
CNOT4-204ENST00000414802 AGLP35573 1532 aa19.63■□□□□ 0.73
CNOT4-204ENST00000414802 KIF3BO15066 747 aa19.6■□□□□ 0.73
CNOT4-204ENST00000414802 PRDM15P57071 1507 aaPredicted RBP19.59■□□□□ 0.73
CNOT4-204ENST00000414802 ARID4BQ4LE39 1312 aaPredicted RBP19.57■□□□□ 0.72
CNOT4-204ENST00000414802 FER1L4A9Z1Z3 1794 aa19.57■□□□□ 0.72
CNOT4-204ENST00000414802 IQGAP3Q86VI3 1631 aa19.57■□□□□ 0.72
CNOT4-204ENST00000414802 CLTCQ00610 1675 aaKnown RBP19.56■□□□□ 0.72
CNOT4-204ENST00000414802 MLECQ14165 292 aa19.55■□□□□ 0.72
CNOT4-204ENST00000414802 CFAP65Q6ZU64 1925 aaKnown RBP19.55■□□□□ 0.72
CNOT4-204ENST00000414802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.722e-6■■□□□ 11.9
CNOT4-204ENST00000414802 KDM5DQ9BY66 1539 aa19.54■□□□□ 0.72
CNOT4-204ENST00000414802 VWDEQ8N2E2 1590 aa19.53■□□□□ 0.72
CNOT4-204ENST00000414802 GGT6Q6P531 493 aa19.53■□□□□ 0.72
CNOT4-204ENST00000414802 ZC3H13Q5T200 1668 aaKnown RBP19.53■□□□□ 0.72
CNOT4-204ENST00000414802 TRIM52Q96A61 297 aa19.52■□□□□ 0.72
CNOT4-204ENST00000414802 FAM135AQ9P2D6 1515 aa19.51■□□□□ 0.71
CNOT4-204ENST00000414802 PZPP20742 1482 aa19.51■□□□□ 0.71
CNOT4-204ENST00000414802 CAMSAP1Q5T5Y3 1602 aa19.51■□□□□ 0.71
CNOT4-204ENST00000414802 TET3O43151 1660 aa19.5■□□□□ 0.71
CNOT4-204ENST00000414802 NUP155O75694 1391 aa19.5■□□□□ 0.71
CNOT4-204ENST00000414802 MADDQ8WXG6 1647 aa19.5■□□□□ 0.71
CNOT4-204ENST00000414802 ABCC3O15438 1527 aa19.5■□□□□ 0.71
CNOT4-204ENST00000414802 RIMS1Q86UR5 1692 aaKnown RBP19.49■□□□□ 0.71
CNOT4-204ENST00000414802 ADAMTSL3P82987 1691 aa19.49■□□□□ 0.71
CNOT4-204ENST00000414802 E9PCH4 1651 aa19.47■□□□□ 0.71
CNOT4-204ENST00000414802 KANK1Q14678 1352 aa19.47■□□□□ 0.71
CNOT4-204ENST00000414802 HRCP23327 699 aa19.46■□□□□ 0.71
CNOT4-204ENST00000414802 EFCAB6Q5THR3 1501 aa19.45■□□□□ 0.7
CNOT4-204ENST00000414802 MROH2AA6NES4 1674 aa19.45■□□□□ 0.7
CNOT4-204ENST00000414802 LMTK2Q8IWU2 1503 aa19.44■□□□□ 0.7
CNOT4-204ENST00000414802 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
CNOT4-204ENST00000414802 C3P01024 1663 aa19.42■□□□□ 0.7
CNOT4-204ENST00000414802 WASHC2CQ9Y4E1 1318 aa19.41■□□□□ 0.7
CNOT4-204ENST00000414802 DHX57Q6P158 1386 aaKnown RBP19.4■□□□□ 0.7
CNOT4-204ENST00000414802 SPHKAPQ2M3C7 1700 aa19.4■□□□□ 0.7
CNOT4-204ENST00000414802 SLC4A1APQ9BWU0 796 aaKnown RBP19.4■□□□□ 0.7
CNOT4-204ENST00000414802 MPHOSPH9Q99550 1183 aa19.39■□□□□ 0.69
CNOT4-204ENST00000414802 PREX1Q8TCU6 1659 aa19.39■□□□□ 0.69
CNOT4-204ENST00000414802 ACIN1Q9UKV3 1341 aaKnown RBP19.37■□□□□ 0.69
CNOT4-204ENST00000414802 FOXD1Q16676 465 aa19.36■□□□□ 0.69
CNOT4-204ENST00000414802 ESF1Q9H501 851 aaKnown RBP19.36■□□□□ 0.69
CNOT4-204ENST00000414802 PKD2Q13563 968 aa19.36■□□□□ 0.69
CNOT4-204ENST00000414802 NPATQ14207 1427 aa19.36■□□□□ 0.69
CNOT4-204ENST00000414802 CNTLNQ9NXG0 1405 aa19.36■□□□□ 0.69
CNOT4-204ENST00000414802 PPP6R1Q9UPN7 881 aa19.34■□□□□ 0.69
CNOT4-204ENST00000414802 PLPPR3Q6T4P5 718 aa19.31■□□□□ 0.68
CNOT4-204ENST00000414802 ARHGAP31Q2M1Z3 1444 aa19.31■□□□□ 0.68
CNOT4-204ENST00000414802 SYNMO15061 1565 aa19.31■□□□□ 0.68
CNOT4-204ENST00000414802 ZMYM3Q14202 1370 aa19.3■□□□□ 0.68
CNOT4-204ENST00000414802 RPRD2Q5VT52 1461 aaKnown RBP19.3■□□□□ 0.68
CNOT4-204ENST00000414802 ERVK-7P63135 1459 aa19.29■□□□□ 0.68
CNOT4-204ENST00000414802 SPATA31D1Q6ZQQ2 1576 aa19.28■□□□□ 0.68
CNOT4-204ENST00000414802 UGGT1Q9NYU2 1555 aa19.28■□□□□ 0.68
CNOT4-204ENST00000414802 CLTCL1P53675 1640 aa19.28■□□□□ 0.68
CNOT4-204ENST00000414802 TRPM2O94759 1503 aa19.28■□□□□ 0.68
CNOT4-204ENST00000414802 CEBPAP49715 358 aaPredicted RBP19.27■□□□□ 0.68
CNOT4-204ENST00000414802 PTPRMP28827 1452 aa19.27■□□□□ 0.68
CNOT4-204ENST00000414802 MYO5BQ9ULV0 1848 aa19.27■□□□□ 0.67
CNOT4-204ENST00000414802 CCER1Q8TC90 406 aaPredicted RBP19.27■□□□□ 0.67
CNOT4-204ENST00000414802 PLA2R1Q13018 1463 aa19.27■□□□□ 0.67
CNOT4-204ENST00000414802 KDM4FA0A1W2PPD8 638 aa19.26■□□□□ 0.67
CNOT4-204ENST00000414802 FBXO31Q5XUX0 539 aaPredicted RBP19.26■□□□□ 0.67
CNOT4-204ENST00000414802 KIF1BO60333 1816 aa19.25■□□□□ 0.67
CNOT4-204ENST00000414802 PIK3C2BO00750 1634 aa19.24■□□□□ 0.67
CNOT4-204ENST00000414802 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
CNOT4-204ENST00000414802 PTPRTO14522 1441 aa19.24■□□□□ 0.67
CNOT4-204ENST00000414802 NOS1P29475 1434 aa19.24■□□□□ 0.67
CNOT4-204ENST00000414802 MYO3AQ8NEV4 1616 aa19.23■□□□□ 0.67
CNOT4-204ENST00000414802 SETD1BQ9UPS6 1966 aaKnown RBP19.21■□□□□ 0.67
CNOT4-204ENST00000414802 TNRQ92752 1358 aa19.19■□□□□ 0.66
CNOT4-204ENST00000414802 CCDC144AA2RUR9 1427 aa19.18■□□□□ 0.66
CNOT4-204ENST00000414802 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
CNOT4-204ENST00000414802 ZNF142P52746 1687 aaPredicted RBP19.16■□□□□ 0.66
CNOT4-204ENST00000414802 UBR1Q8IWV7 1749 aa19.15■□□□□ 0.66
CNOT4-204ENST00000414802 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
CNOT4-204ENST00000414802 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.65
CNOT4-204ENST00000414802 ADGRB3O60242 1522 aa19.13■□□□□ 0.65
CNOT4-204ENST00000414802 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
CNOT4-204ENST00000414802 CEP170BQ9Y4F5 1589 aaPredicted RBP19.12■□□□□ 0.65
CNOT4-204ENST00000414802 CLSPNQ9HAW4 1339 aa19.11■□□□□ 0.65
CNOT4-204ENST00000414802 NLRP1Q9C000 1473 aa19.1■□□□□ 0.65
CNOT4-204ENST00000414802 IFT172Q9UG01 1749 aa19.1■□□□□ 0.65
CNOT4-204ENST00000414802 IDI1Q13907 227 aa19.1■□□□□ 0.65
CNOT4-204ENST00000414802 KDM5AP29375 1690 aaKnown RBP19.1■□□□□ 0.65
CNOT4-204ENST00000414802 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.65
CNOT4-204ENST00000414802 PPLO60437 1756 aa19.08■□□□□ 0.65
CNOT4-204ENST00000414802 A2ML1A8K2U0 1454 aa19.07■□□□□ 0.64
CNOT4-204ENST00000414802 SLC52A1Q9NWF4 448 aa19.07■□□□□ 0.64
CNOT4-204ENST00000414802 SPATA31E1Q6ZUB1 1445 aa19.06■□□□□ 0.64
CNOT4-204ENST00000414802 UHRF1BP1Q6BDS2 1440 aa19.05■□□□□ 0.64
CNOT4-204ENST00000414802 NEURL4Q96JN8 1562 aa19.05■□□□□ 0.64
CNOT4-204ENST00000414802 NEXMIFQ5QGS0 1516 aa19.02■□□□□ 0.64
CNOT4-204ENST00000414802 RGL3Q3MIN7 710 aa19.02■□□□□ 0.64
CNOT4-204ENST00000414802 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
CNOT4-204ENST00000414802 TONSLQ96HA7 1378 aa19.01■□□□□ 0.63
CNOT4-204ENST00000414802 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
CNOT4-204ENST00000414802 POLR1AO95602 1720 aaPredicted RBP18.99■□□□□ 0.63
CNOT4-204ENST00000414802 LMTK3Q96Q04 1460 aa18.98■□□□□ 0.63
CNOT4-204ENST00000414802 RIMS2Q9UQ26 1411 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms