RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 CNTLNQ9NXG0 1405 aa21.5■■□□□ 1.03
LRCH3-202ENST00000414675 RALGAPBQ86X10 1494 aa21.49■■□□□ 1.03
LRCH3-202ENST00000414675 KDM5CP41229 1560 aa21.49■■□□□ 1.03
LRCH3-202ENST00000414675 RIMBP3CA6NJZ7 1639 aa21.49■■□□□ 1.03
LRCH3-202ENST00000414675 RIMBP3BA6NNM3 1639 aa21.49■■□□□ 1.03
LRCH3-202ENST00000414675 RIMBP3Q9UFD9 1639 aa21.49■■□□□ 1.03
LRCH3-202ENST00000414675 USP47Q96K76 1375 aa21.48■■□□□ 1.03
LRCH3-202ENST00000414675 CCDC144AA2RUR9 1427 aa21.48■■□□□ 1.03
LRCH3-202ENST00000414675 BCORL1Q5H9F3 1711 aa21.48■■□□□ 1.03
LRCH3-202ENST00000414675 KDM2AQ9Y2K7 1162 aa21.48■■□□□ 1.03
LRCH3-202ENST00000414675 KIF7Q2M1P5 1343 aa21.47■■□□□ 1.03
LRCH3-202ENST00000414675 INO80Q9ULG1 1556 aaPredicted RBP21.47■■□□□ 1.03
LRCH3-202ENST00000414675 DCAF11Q8TEB1 546 aa21.46■■□□□ 1.03
LRCH3-202ENST00000414675 ADGRL1O94910 1474 aa21.46■■□□□ 1.03
LRCH3-202ENST00000414675 ATP7AQ04656 1500 aa21.45■■□□□ 1.02
LRCH3-202ENST00000414675 SCAPERQ9BY12 1400 aa21.45■■□□□ 1.02
LRCH3-202ENST00000414675 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
LRCH3-202ENST00000414675 ATP10AO60312 1499 aa21.41■■□□□ 1.02
LRCH3-202ENST00000414675 CYB5RLQ6IPT4 315 aa21.41■■□□□ 1.02
LRCH3-202ENST00000414675 DEPDC5O75140 1603 aa21.4■■□□□ 1.02
LRCH3-202ENST00000414675 A2MP01023 1474 aa21.4■■□□□ 1.02
LRCH3-202ENST00000414675 RGL3Q3MIN7 710 aa21.4■■□□□ 1.02
LRCH3-202ENST00000414675 E9PCH4 1651 aa21.39■■□□□ 1.02
LRCH3-202ENST00000414675 CARD11Q9BXL7 1154 aa21.39■■□□□ 1.02
LRCH3-202ENST00000414675 PRAG1Q86YV5 1406 aa21.38■■□□□ 1.01
LRCH3-202ENST00000414675 TRPM1Q7Z4N2 1603 aa21.37■■□□□ 1.01
LRCH3-202ENST00000414675 KIDINS220Q9ULH0 1771 aa21.35■■□□□ 1.01
LRCH3-202ENST00000414675 CD109Q6YHK3 1445 aa21.33■■□□□ 1.01
LRCH3-202ENST00000414675 MYT1LQ9UL68 1186 aa21.33■■□□□ 1.01
LRCH3-202ENST00000414675 ROCK2O75116 1388 aaKnown RBP21.33■■□□□ 1
LRCH3-202ENST00000414675 VWDEQ8N2E2 1590 aa21.32■■□□□ 1
LRCH3-202ENST00000414675 PRKRIP1Q9H875 184 aaPredicted RBP21.32■■□□□ 1
LRCH3-202ENST00000414675 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
LRCH3-202ENST00000414675 DHX29Q7Z478 1369 aaKnown RBP21.31■■□□□ 1
LRCH3-202ENST00000414675 TET3O43151 1660 aa21.31■■□□□ 1
LRCH3-202ENST00000414675 CCDC184Q52MB2 194 aa21.31■■□□□ 1
LRCH3-202ENST00000414675 EIF2AK4Q9P2K8 1649 aaKnown RBP21.3■■□□□ 1
LRCH3-202ENST00000414675 ST20-MTHFSA0A0A6YYL1 179 aa21.3■■□□□ 1
LRCH3-202ENST00000414675 KIF3BO15066 747 aa21.3■■□□□ 1
LRCH3-202ENST00000414675 SPHKAPQ2M3C7 1700 aa21.3■■□□□ 1
LRCH3-202ENST00000414675 POLR3GLQ9BT43 218 aa21.3■■□□□ 1
LRCH3-202ENST00000414675 ZNF518AQ6AHZ1 1483 aa21.29■■□□□ 1
LRCH3-202ENST00000414675 NBPF1Q3BBV0 1214 aa21.29■■□□□ 1
LRCH3-202ENST00000414675 TRPM2O94759 1503 aa21.29■■□□□ 1
LRCH3-202ENST00000414675 CFAP74Q9C0B2 1584 aa21.28■■□□□ 1
LRCH3-202ENST00000414675 PRDM15P57071 1507 aaPredicted RBP21.28■■□□□ 1
LRCH3-202ENST00000414675 PTPRTO14522 1441 aa21.27■■□□□ 1
LRCH3-202ENST00000414675 CLTCL1P53675 1640 aa21.27■□□□□ 0.99
LRCH3-202ENST00000414675 ARID4BQ4LE39 1312 aaPredicted RBP21.26■□□□□ 0.99
LRCH3-202ENST00000414675 GPRASP1Q5JY77 1395 aa21.26■□□□□ 0.99
LRCH3-202ENST00000414675 POGZQ7Z3K3 1410 aa21.26■□□□□ 0.99
LRCH3-202ENST00000414675 CEP152O94986 1710 aa21.25■□□□□ 0.99
LRCH3-202ENST00000414675 KANK1Q14678 1352 aa21.25■□□□□ 0.99
LRCH3-202ENST00000414675 LAMC1P11047 1609 aa21.23■□□□□ 0.99
LRCH3-202ENST00000414675 FRMPD1Q5SYB0 1578 aa21.2■□□□□ 0.98
LRCH3-202ENST00000414675 HECW2Q9P2P5 1572 aa21.19■□□□□ 0.98
LRCH3-202ENST00000414675 RNF17Q9BXT8 1623 aaKnown RBP21.19■□□□□ 0.98
LRCH3-202ENST00000414675 SUPT16HQ9Y5B9 1047 aaKnown RBP21.19■□□□□ 0.98
LRCH3-202ENST00000414675 MLH3Q9UHC1 1453 aa21.19■□□□□ 0.98
LRCH3-202ENST00000414675 MADDQ8WXG6 1647 aa21.19■□□□□ 0.98
LRCH3-202ENST00000414675 PPRC1Q5VV67 1664 aaKnown RBP21.18■□□□□ 0.98
LRCH3-202ENST00000414675 EFCAB6Q5THR3 1501 aa21.17■□□□□ 0.98
LRCH3-202ENST00000414675 HNRNPUQ00839 825 aaKnown RBP eCLIP21.17■□□□□ 0.98
LRCH3-202ENST00000414675 UGGT1Q9NYU2 1555 aa21.16■□□□□ 0.98
LRCH3-202ENST00000414675 ABCA6Q8N139 1617 aa21.16■□□□□ 0.98
LRCH3-202ENST00000414675 MRS2Q9HD23 443 aa21.16■□□□□ 0.98
LRCH3-202ENST00000414675 CNGB1Q14028 1251 aaPredicted RBP21.16■□□□□ 0.98
LRCH3-202ENST00000414675 NEO1Q92859 1461 aa21.16■□□□□ 0.98
LRCH3-202ENST00000414675 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.97
LRCH3-202ENST00000414675 RAPGEF3O95398 923 aa21.13■□□□□ 0.97
LRCH3-202ENST00000414675 MAP3K4Q9Y6R4 1608 aa21.13■□□□□ 0.97
LRCH3-202ENST00000414675 TESK2Q96S53 571 aa21.13■□□□□ 0.97
LRCH3-202ENST00000414675 COL17A1Q9UMD9 1497 aaPredicted RBP21.11■□□□□ 0.97
LRCH3-202ENST00000414675 FAM9BQ8IZU0 186 aa21.11■□□□□ 0.97
LRCH3-202ENST00000414675 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
LRCH3-202ENST00000414675 NEURL4Q96JN8 1562 aa21.09■□□□□ 0.97
LRCH3-202ENST00000414675 RICTORQ6R327 1708 aa21.08■□□□□ 0.97
LRCH3-202ENST00000414675 GLI2P10070 1586 aa21.08■□□□□ 0.97
LRCH3-202ENST00000414675 IQGAP1P46940 1657 aa21.08■□□□□ 0.97
LRCH3-202ENST00000414675 CFAP65Q6ZU64 1925 aaKnown RBP21.08■□□□□ 0.97
LRCH3-202ENST00000414675 KIF1BO60333 1816 aa21.08■□□□□ 0.96
LRCH3-202ENST00000414675 DIP2BQ9P265 1576 aa21.07■□□□□ 0.96
LRCH3-202ENST00000414675 MROH2AA6NES4 1674 aa21.07■□□□□ 0.96
LRCH3-202ENST00000414675 GGT6Q6P531 493 aa21.07■□□□□ 0.96
LRCH3-202ENST00000414675 DIP2CQ9Y2E4 1556 aa21.06■□□□□ 0.96
LRCH3-202ENST00000414675 NPATQ14207 1427 aa21.05■□□□□ 0.96
LRCH3-202ENST00000414675 IFT172Q9UG01 1749 aa21.04■□□□□ 0.96
LRCH3-202ENST00000414675 STAC3Q96MF2 364 aa21.03■□□□□ 0.96
LRCH3-202ENST00000414675 ABCC3O15438 1527 aa21.03■□□□□ 0.96
LRCH3-202ENST00000414675 FAM69CQ0P6D2 419 aa21.03■□□□□ 0.96
LRCH3-202ENST00000414675 KIAA1210Q9ULL0 1709 aa21.01■□□□□ 0.95
LRCH3-202ENST00000414675 FKBP8Q14318 412 aa21.01■□□□□ 0.95
LRCH3-202ENST00000414675 MYOM2P54296 1465 aa21■□□□□ 0.95
LRCH3-202ENST00000414675 YEATS2Q9ULM3 1422 aa21■□□□□ 0.95
LRCH3-202ENST00000414675 SCAF11Q99590 1463 aaKnown RBP21■□□□□ 0.95
LRCH3-202ENST00000414675 ADGRF5Q8IZF2 1346 aa20.99■□□□□ 0.95
LRCH3-202ENST00000414675 TMF1P82094 1093 aa20.99■□□□□ 0.95
LRCH3-202ENST00000414675 ADGRB3O60242 1522 aa20.99■□□□□ 0.95
LRCH3-202ENST00000414675 CAMSAP1Q5T5Y3 1602 aa20.98■□□□□ 0.95
LRCH3-202ENST00000414675 PER1O15534 1290 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms