RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
RFFL-204ENST00000414419 EIF2AK4Q9P2K8 1649 aaKnown RBP17.25■□□□□ 0.35
RFFL-204ENST00000414419 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
RFFL-204ENST00000414419 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
RFFL-204ENST00000414419 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
RFFL-204ENST00000414419 KDM5DQ9BY66 1539 aa17.24■□□□□ 0.35
RFFL-204ENST00000414419 FAM135AQ9P2D6 1515 aa17.24■□□□□ 0.35
RFFL-204ENST00000414419 KIF15Q9NS87 1388 aa17.24■□□□□ 0.35
RFFL-204ENST00000414419 ANKRD30AQ9BXX3 1397 aa17.23■□□□□ 0.35
RFFL-204ENST00000414419 RNF17Q9BXT8 1623 aaKnown RBP17.21■□□□□ 0.35
RFFL-204ENST00000414419 PTPRKQ15262 1439 aa17.21■□□□□ 0.34
RFFL-204ENST00000414419 ERBINQ96RT1 1412 aa17.19■□□□□ 0.34
RFFL-204ENST00000414419 ZC3H13Q5T200 1668 aaKnown RBP17.19■□□□□ 0.34
RFFL-204ENST00000414419 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
RFFL-204ENST00000414419 MYO3AQ8NEV4 1616 aa17.18■□□□□ 0.34
RFFL-204ENST00000414419 CFAP65Q6ZU64 1925 aaKnown RBP17.17■□□□□ 0.34
RFFL-204ENST00000414419 PZPP20742 1482 aa17.17■□□□□ 0.34
RFFL-204ENST00000414419 NCOA1Q15788 1441 aa17.16■□□□□ 0.34
RFFL-204ENST00000414419 STRCQ7RTU9 1775 aa17.16■□□□□ 0.34
RFFL-204ENST00000414419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
RFFL-204ENST00000414419 CEP152O94986 1710 aa17.16■□□□□ 0.34
RFFL-204ENST00000414419 FBXO31Q5XUX0 539 aaPredicted RBP17.15■□□□□ 0.34
RFFL-204ENST00000414419 ABCC3O15438 1527 aa17.15■□□□□ 0.34
RFFL-204ENST00000414419 KANK1Q14678 1352 aa17.15■□□□□ 0.34
RFFL-204ENST00000414419 TNRQ92752 1358 aa17.15■□□□□ 0.34
RFFL-204ENST00000414419 ZNF142P52746 1687 aaPredicted RBP17.14■□□□□ 0.33
RFFL-204ENST00000414419 ADGRL2O95490 1459 aa17.14■□□□□ 0.33
RFFL-204ENST00000414419 CEP170BQ9Y4F5 1589 aaPredicted RBP17.13■□□□□ 0.33
RFFL-204ENST00000414419 CAMSAP1Q5T5Y3 1602 aa17.13■□□□□ 0.33
RFFL-204ENST00000414419 MROH1Q8NDA8 1641 aa17.13■□□□□ 0.33
RFFL-204ENST00000414419 ITGAEP38570 1179 aa17.12■□□□□ 0.33
RFFL-204ENST00000414419 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
RFFL-204ENST00000414419 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
RFFL-204ENST00000414419 A2ML1A8K2U0 1454 aa17.1■□□□□ 0.33
RFFL-204ENST00000414419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.09■□□□□ 0.33
RFFL-204ENST00000414419 ANKRD50Q9ULJ7 1429 aa17.09■□□□□ 0.33
RFFL-204ENST00000414419 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
RFFL-204ENST00000414419 PTPRTO14522 1441 aa17.06■□□□□ 0.32
RFFL-204ENST00000414419 PKD2Q13563 968 aa17.06■□□□□ 0.32
RFFL-204ENST00000414419 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
RFFL-204ENST00000414419 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
RFFL-204ENST00000414419 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
RFFL-204ENST00000414419 SPATA31D1Q6ZQQ2 1576 aa17.05■□□□□ 0.32
RFFL-204ENST00000414419 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
RFFL-204ENST00000414419 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
RFFL-204ENST00000414419 THEMISQ8N1K5 641 aaPredicted RBP17.04■□□□□ 0.32
RFFL-204ENST00000414419 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
RFFL-204ENST00000414419 UGGT1Q9NYU2 1555 aa17.03■□□□□ 0.32
RFFL-204ENST00000414419 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.31
RFFL-204ENST00000414419 LMTK2Q8IWU2 1503 aa17.01■□□□□ 0.31
RFFL-204ENST00000414419 VWDEQ8N2E2 1590 aa17.01■□□□□ 0.31
RFFL-204ENST00000414419 POLR1AO95602 1720 aaPredicted RBP17■□□□□ 0.31
RFFL-204ENST00000414419 ANKLE2Q86XL3 938 aa17■□□□□ 0.31
RFFL-204ENST00000414419 CERKQ8TCT0 537 aa17■□□□□ 0.31
RFFL-204ENST00000414419 FBXO41Q8TF61 875 aa16.98■□□□□ 0.31
RFFL-204ENST00000414419 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
RFFL-204ENST00000414419 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.31
RFFL-204ENST00000414419 UNC13BO14795 1591 aa16.96■□□□□ 0.31
RFFL-204ENST00000414419 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.3
RFFL-204ENST00000414419 TET3O43151 1660 aa16.95■□□□□ 0.3
RFFL-204ENST00000414419 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
RFFL-204ENST00000414419 RPRD2Q5VT52 1461 aaKnown RBP16.93■□□□□ 0.3
RFFL-204ENST00000414419 NUP155O75694 1391 aa16.92■□□□□ 0.3
RFFL-204ENST00000414419 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
RFFL-204ENST00000414419 SLC52A1Q9NWF4 448 aa16.91■□□□□ 0.3
RFFL-204ENST00000414419 IQGAP3Q86VI3 1631 aa16.91■□□□□ 0.3
RFFL-204ENST00000414419 NEURL4Q96JN8 1562 aa16.9■□□□□ 0.3
RFFL-204ENST00000414419 NOS1P29475 1434 aa16.9■□□□□ 0.3
RFFL-204ENST00000414419 IDI1Q13907 227 aa16.9■□□□□ 0.3
RFFL-204ENST00000414419 ZNF335Q9H4Z2 1342 aaPredicted RBP16.9■□□□□ 0.3
RFFL-204ENST00000414419 SYNMO15061 1565 aa16.89■□□□□ 0.3
RFFL-204ENST00000414419 NPHP4O75161 1426 aaPredicted RBP16.89■□□□□ 0.29
RFFL-204ENST00000414419 EID1Q9Y6B2 187 aa16.89■□□□□ 0.29
RFFL-204ENST00000414419 LTBP4Q8N2S1 1624 aa16.88■□□□□ 0.29
RFFL-204ENST00000414419 E9PCH4 1651 aa16.88■□□□□ 0.29
RFFL-204ENST00000414419 KDM5AP29375 1690 aaKnown RBP16.88■□□□□ 0.29
RFFL-204ENST00000414419 IQGAP1P46940 1657 aa16.88■□□□□ 0.29
RFFL-204ENST00000414419 MED14O60244 1454 aa16.88■□□□□ 0.29
RFFL-204ENST00000414419 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
RFFL-204ENST00000414419 NAIPQ13075 1403 aa16.87■□□□□ 0.29
RFFL-204ENST00000414419 SCAF11Q99590 1463 aaKnown RBP16.86■□□□□ 0.29
RFFL-204ENST00000414419 SLIT1O75093 1534 aa16.86■□□□□ 0.29
RFFL-204ENST00000414419 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
RFFL-204ENST00000414419 TMEM2Q9UHN6 1383 aa16.84■□□□□ 0.29
RFFL-204ENST00000414419 ARHGAP23Q9P227 1491 aa16.84■□□□□ 0.29
RFFL-204ENST00000414419 HFM1A2PYH4 1435 aa16.83■□□□□ 0.28
RFFL-204ENST00000414419 ADGRB3O60242 1522 aa16.83■□□□□ 0.28
RFFL-204ENST00000414419 CHGAP10645 457 aaKnown RBP16.83■□□□□ 0.28
RFFL-204ENST00000414419 LTKP29376 864 aa16.83■□□□□ 0.28
RFFL-204ENST00000414419 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.28
RFFL-204ENST00000414419 MYO5BQ9ULV0 1848 aa16.82■□□□□ 0.28
RFFL-204ENST00000414419 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
RFFL-204ENST00000414419 CPS1P31327 1500 aa16.8■□□□□ 0.28
RFFL-204ENST00000414419 BCANQ96GW7 911 aa16.79■□□□□ 0.28
RFFL-204ENST00000414419 SPHKAPQ2M3C7 1700 aa16.79■□□□□ 0.28
RFFL-204ENST00000414419 TMEM131LA2VDJ0 1609 aa16.78■□□□□ 0.28
RFFL-204ENST00000414419 PPP1R15AO75807 674 aaPredicted RBP16.77■□□□□ 0.28
RFFL-204ENST00000414419 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
RFFL-204ENST00000414419 RIMS2Q9UQ26 1411 aa16.74■□□□□ 0.27
RFFL-204ENST00000414419 UBAP1LF5GYI3 381 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms