RNA–Protein interactions for RNA: ENST00000414034.7

GHDC-202, Transcript of GH3 domain containing, humanhuman

TSL 2 BASIC

Gene GHDC, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-202ENST00000414034 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
GHDC-202ENST00000414034 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
GHDC-202ENST00000414034 ABCC5O15440 1437 aa22.79■■□□□ 1.24
GHDC-202ENST00000414034 DNMT1P26358 1616 aaKnown RBP22.78■■□□□ 1.24
GHDC-202ENST00000414034 PZPP20742 1482 aa22.78■■□□□ 1.24
GHDC-202ENST00000414034 NLRP13Q86W25 1043 aa22.78■■□□□ 1.24
GHDC-202ENST00000414034 CRBNQ96SW2 442 aa22.78■■□□□ 1.24
GHDC-202ENST00000414034 PLIN1O60240 522 aa22.77■■□□□ 1.24
GHDC-202ENST00000414034 SKAP1Q86WV1 359 aa22.76■■□□□ 1.23
GHDC-202ENST00000414034 KIAA1107Q9UPP5 1409 aa22.76■■□□□ 1.23
GHDC-202ENST00000414034 RALGAPBQ86X10 1494 aa22.75■■□□□ 1.23
GHDC-202ENST00000414034 CDCA7LQ96GN5 454 aa22.75■■□□□ 1.23
GHDC-202ENST00000414034 CARD11Q9BXL7 1154 aa22.75■■□□□ 1.23
GHDC-202ENST00000414034 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
GHDC-202ENST00000414034 CDK13Q14004 1512 aaKnown RBP22.73■■□□□ 1.23
GHDC-202ENST00000414034 CEP170Q5SW79 1584 aa22.73■■□□□ 1.23
GHDC-202ENST00000414034 FAM161AQ3B820 660 aa22.72■■□□□ 1.23
GHDC-202ENST00000414034 FRAT2O75474 233 aaPredicted RBP22.72■■□□□ 1.23
GHDC-202ENST00000414034 KDM2BQ8NHM5 1336 aa22.71■■□□□ 1.23
GHDC-202ENST00000414034 CENPQQ7L2Z9 268 aaPredicted RBP22.71■■□□□ 1.23
GHDC-202ENST00000414034 PARD3Q8TEW0 1356 aa22.69■■□□□ 1.22
GHDC-202ENST00000414034 ST20-MTHFSA0A0A6YYL1 179 aa22.69■■□□□ 1.22
GHDC-202ENST00000414034 NUP160Q12769 1436 aa22.68■■□□□ 1.22
GHDC-202ENST00000414034 E9PCH4 1651 aa22.68■■□□□ 1.22
GHDC-202ENST00000414034 INSRP06213 1382 aa22.68■■□□□ 1.22
GHDC-202ENST00000414034 PKD2Q13563 968 aa22.67■■□□□ 1.22
GHDC-202ENST00000414034 C8orf34Q49A92 452 aa22.67■■□□□ 1.22
GHDC-202ENST00000414034 ZNF644Q9H582 1327 aaPredicted RBP22.66■■□□□ 1.22
GHDC-202ENST00000414034 DCAF11Q8TEB1 546 aa22.66■■□□□ 1.22
GHDC-202ENST00000414034 ZMYM4Q5VZL5 1548 aa22.64■■□□□ 1.22
GHDC-202ENST00000414034 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.21
GHDC-202ENST00000414034 PLEKHH2Q8IVE3 1493 aa22.63■■□□□ 1.21
GHDC-202ENST00000414034 ARHGEF12Q9NZN5 1544 aa22.62■■□□□ 1.21
GHDC-202ENST00000414034 BLMP54132 1417 aaPredicted RBP22.62■■□□□ 1.21
GHDC-202ENST00000414034 ARID3CA6NKF2 412 aa22.62■■□□□ 1.21
GHDC-202ENST00000414034 C20orf194Q5TEA3 1177 aa22.61■■□□□ 1.21
GHDC-202ENST00000414034 PER1O15534 1290 aaPredicted RBP22.54■■□□□ 1.2
GHDC-202ENST00000414034 JPH4Q96JJ6 628 aa22.54■■□□□ 1.2
GHDC-202ENST00000414034 IQGAP2Q13576 1575 aa22.54■■□□□ 1.2
GHDC-202ENST00000414034 ADGBQ8N7X0 1667 aa22.54■■□□□ 1.2
GHDC-202ENST00000414034 KDM2AQ9Y2K7 1162 aa22.54■■□□□ 1.2
GHDC-202ENST00000414034 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.53■■□□□ 1.2
GHDC-202ENST00000414034 L1TD1Q5T7N2 865 aaKnown RBP22.52■■□□□ 1.2
GHDC-202ENST00000414034 ADGRL2O95490 1459 aa22.52■■□□□ 1.2
GHDC-202ENST00000414034 GLIPR1L2Q4G1C9 344 aa22.52■■□□□ 1.2
GHDC-202ENST00000414034 RGS3P49796 1198 aa22.51■■□□□ 1.19
GHDC-202ENST00000414034 KIAA0586Q9BVV6 1533 aa22.5■■□□□ 1.19
GHDC-202ENST00000414034 CAMSAP2Q08AD1 1489 aa22.5■■□□□ 1.19
GHDC-202ENST00000414034 POGKQ9P215 609 aa22.49■■□□□ 1.19
GHDC-202ENST00000414034 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
GHDC-202ENST00000414034 ANKRD30AQ9BXX3 1397 aa22.49■■□□□ 1.19
GHDC-202ENST00000414034 PRG4Q92954 1404 aaPredicted RBP22.49■■□□□ 1.19
GHDC-202ENST00000414034 CC2D1BQ5T0F9 858 aaKnown RBP22.48■■□□□ 1.19
GHDC-202ENST00000414034 RRAGDQ9NQL2 400 aaPredicted RBP22.47■■□□□ 1.19
GHDC-202ENST00000414034 CFDP1Q9UEE9 299 aaPredicted RBP22.47■■□□□ 1.19
GHDC-202ENST00000414034 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
GHDC-202ENST00000414034 BECN1Q14457 450 aa22.46■■□□□ 1.19
GHDC-202ENST00000414034 DUSP27Q5VZP5 1158 aa22.45■■□□□ 1.18
GHDC-202ENST00000414034 NUP155O75694 1391 aa22.45■■□□□ 1.18
GHDC-202ENST00000414034 PKNOX2Q96KN3 472 aa22.44■■□□□ 1.18
GHDC-202ENST00000414034 ADAMTS8Q9UP79 889 aa22.41■■□□□ 1.18
GHDC-202ENST00000414034 CROCC2H7BZ55 1655 aa22.4■■□□□ 1.18
GHDC-202ENST00000414034 USP19O94966 1318 aa22.4■■□□□ 1.18
GHDC-202ENST00000414034 ITSN2Q9NZM3 1697 aa22.39■■□□□ 1.18
GHDC-202ENST00000414034 NUP153P49790 1475 aaKnown RBP22.39■■□□□ 1.18
GHDC-202ENST00000414034 GOLGA2Q08379 1002 aa22.39■■□□□ 1.18
GHDC-202ENST00000414034 COL17A1Q9UMD9 1497 aaPredicted RBP22.38■■□□□ 1.17
GHDC-202ENST00000414034 EIF3AQ14152 1382 aaKnown RBP22.37■■□□□ 1.17
GHDC-202ENST00000414034 PLEKHH1Q9ULM0 1364 aa22.37■■□□□ 1.17
GHDC-202ENST00000414034 PANK3Q9H999 370 aa22.37■■□□□ 1.17
GHDC-202ENST00000414034 ZNF777Q9ULD5 760 aaPredicted RBP22.37■■□□□ 1.17
GHDC-202ENST00000414034 VIRMAQ69YN4 1812 aaKnown RBP22.35■■□□□ 1.17
GHDC-202ENST00000414034 TRHP20396 242 aaPredicted RBP22.35■■□□□ 1.17
GHDC-202ENST00000414034 SLKQ9H2G2 1235 aaPredicted RBP22.35■■□□□ 1.17
GHDC-202ENST00000414034 ZNF521Q96K83 1311 aa22.35■■□□□ 1.17
GHDC-202ENST00000414034 TROQ12816 1431 aaPredicted RBP22.35■■□□□ 1.17
GHDC-202ENST00000414034 GPATCH8Q9UKJ3 1502 aaKnown RBP22.35■■□□□ 1.17
GHDC-202ENST00000414034 WDR43Q15061 677 aaKnown RBP eCLIP22.35■■□□□ 1.17
GHDC-202ENST00000414034 PRAG1Q86YV5 1406 aa22.35■■□□□ 1.17
GHDC-202ENST00000414034 KDM5DQ9BY66 1539 aa22.34■■□□□ 1.17
GHDC-202ENST00000414034 TRPM1Q7Z4N2 1603 aa22.34■■□□□ 1.17
GHDC-202ENST00000414034 PNNQ9H307 717 aaKnown RBP22.34■■□□□ 1.17
GHDC-202ENST00000414034 MAPK8IP3Q9UPT6 1336 aa22.32■■□□□ 1.16
GHDC-202ENST00000414034 NAP1L5Q96NT1 182 aaPredicted RBP22.32■■□□□ 1.16
GHDC-202ENST00000414034 DISP3Q9P2K9 1392 aa22.32■■□□□ 1.16
GHDC-202ENST00000414034 RAPGEF6Q8TEU7 1601 aa22.32■■□□□ 1.16
GHDC-202ENST00000414034 GPRASP1Q5JY77 1395 aa22.31■■□□□ 1.16
GHDC-202ENST00000414034 GOLGA6L3A6NEY3 463 aa22.31■■□□□ 1.16
GHDC-202ENST00000414034 CLCN1P35523 988 aa22.31■■□□□ 1.16
GHDC-202ENST00000414034 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
GHDC-202ENST00000414034 ANTXR1Q9H6X2 564 aa22.31■■□□□ 1.16
GHDC-202ENST00000414034 TESK2Q96S53 571 aa22.3■■□□□ 1.16
GHDC-202ENST00000414034 NBPF1Q3BBV0 1214 aa22.29■■□□□ 1.16
GHDC-202ENST00000414034 XRCC6P12956 609 aaKnown RBP eCLIP22.29■■□□□ 1.16
GHDC-202ENST00000414034 SEC24BO95487 1268 aa22.28■■□□□ 1.16
GHDC-202ENST00000414034 TMF1P82094 1093 aa22.28■■□□□ 1.16
GHDC-202ENST00000414034 ERBINQ96RT1 1412 aa22.28■■□□□ 1.16
GHDC-202ENST00000414034 RRP9O43818 475 aaKnown RBP22.28■■□□□ 1.16
GHDC-202ENST00000414034 HSP90AA2PQ14568 343 aaPredicted RBP22.28■■□□□ 1.16
GHDC-202ENST00000414034 IGHDP01880 384 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms