RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 EIF3AQ14152 1382 aaKnown RBP17.52■□□□□ 0.4
CLTCL1-201ENST00000412649 TPM2P07951 284 aa17.52■□□□□ 0.4
CLTCL1-201ENST00000412649 EFCAB5A4FU69 1503 aa17.51■□□□□ 0.39
CLTCL1-201ENST00000412649 E9PSI1 815 aa17.51■□□□□ 0.39
CLTCL1-201ENST00000412649 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
CLTCL1-201ENST00000412649 CLUAP1Q96AJ1 413 aa17.5■□□□□ 0.39
CLTCL1-201ENST00000412649 ZMYND15Q9H091 742 aa17.49■□□□□ 0.39
CLTCL1-201ENST00000412649 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
CLTCL1-201ENST00000412649 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.48■□□□□ 0.39
CLTCL1-201ENST00000412649 FAM13BQ9NYF5 915 aa17.48■□□□□ 0.39
CLTCL1-201ENST00000412649 ADAMTS8Q9UP79 889 aa17.48■□□□□ 0.39
CLTCL1-201ENST00000412649 ESPNB1AK53 854 aa17.47■□□□□ 0.39
CLTCL1-201ENST00000412649 CALD1Q05682 793 aaKnown RBP17.47■□□□□ 0.39
CLTCL1-201ENST00000412649 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
CLTCL1-201ENST00000412649 APAF1O14727 1248 aa17.46■□□□□ 0.39
CLTCL1-201ENST00000412649 FOXD4L1Q9NU39 408 aa17.46■□□□□ 0.39
CLTCL1-201ENST00000412649 CHGAP10645 457 aaKnown RBP17.46■□□□□ 0.38
CLTCL1-201ENST00000412649 C20orf194Q5TEA3 1177 aa17.45■□□□□ 0.38
CLTCL1-201ENST00000412649 CASC1Q6TDU7 716 aa17.45■□□□□ 0.38
CLTCL1-201ENST00000412649 DDX49Q9Y6V7 483 aaKnown RBP17.45■□□□□ 0.38
CLTCL1-201ENST00000412649 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
CLTCL1-201ENST00000412649 EHBP1L1Q8N3D4 1523 aa17.45■□□□□ 0.38
CLTCL1-201ENST00000412649 MCM4P33991 863 aa17.44■□□□□ 0.38
CLTCL1-201ENST00000412649 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
CLTCL1-201ENST00000412649 ISY1Q9ULR0 285 aaKnown RBP17.44■□□□□ 0.38
CLTCL1-201ENST00000412649 ANKRD30BQ9BXX2 1392 aa17.44■□□□□ 0.38
CLTCL1-201ENST00000412649 GRPEL1Q9HAV7 217 aa17.43■□□□□ 0.38
CLTCL1-201ENST00000412649 ITPRIPQ8IWB1 547 aa17.43■□□□□ 0.38
CLTCL1-201ENST00000412649 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
CLTCL1-201ENST00000412649 MAP7D2Q96T17 732 aa17.43■□□□□ 0.38
CLTCL1-201ENST00000412649 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
CLTCL1-201ENST00000412649 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
CLTCL1-201ENST00000412649 PTPRKQ15262 1439 aa17.41■□□□□ 0.38
CLTCL1-201ENST00000412649 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
CLTCL1-201ENST00000412649 CHAF1AQ13111 956 aaPredicted RBP17.41■□□□□ 0.38
CLTCL1-201ENST00000412649 SUPT6HQ7KZ85 1726 aaKnown RBP17.41■□□□□ 0.38
CLTCL1-201ENST00000412649 CDK11BP21127 795 aaKnown RBP17.41■□□□□ 0.38
CLTCL1-201ENST00000412649 PANK1Q8TE04 598 aa17.4■□□□□ 0.38
CLTCL1-201ENST00000412649 ZNF644Q9H582 1327 aaPredicted RBP17.4■□□□□ 0.38
CLTCL1-201ENST00000412649 KIAA2012Q0VF49 1180 aa17.4■□□□□ 0.38
CLTCL1-201ENST00000412649 MORC1Q86VD1 984 aa17.4■□□□□ 0.38
CLTCL1-201ENST00000412649 RPRD2Q5VT52 1461 aaKnown RBP17.4■□□□□ 0.38
CLTCL1-201ENST00000412649 PLCB2Q00722 1185 aa17.4■□□□□ 0.38
CLTCL1-201ENST00000412649 BCL2L13Q9BXK5 485 aa17.39■□□□□ 0.37
CLTCL1-201ENST00000412649 PODXL2Q9NZ53 605 aa17.39■□□□□ 0.37
CLTCL1-201ENST00000412649 CLCN1P35523 988 aa17.39■□□□□ 0.37
CLTCL1-201ENST00000412649 NGEFQ8N5V2 710 aa17.38■□□□□ 0.37
CLTCL1-201ENST00000412649 NASPP49321 788 aaPredicted RBP17.38■□□□□ 0.37
CLTCL1-201ENST00000412649 AAMPQ13685 434 aa17.38■□□□□ 0.37
CLTCL1-201ENST00000412649 CCDC144AA2RUR9 1427 aa17.37■□□□□ 0.37
CLTCL1-201ENST00000412649 PDE3AQ14432 1141 aa17.36■□□□□ 0.37
CLTCL1-201ENST00000412649 C8orf34Q49A92 452 aa17.36■□□□□ 0.37
CLTCL1-201ENST00000412649 KIAA1211Q6ZU35 1233 aa17.36■□□□□ 0.37
CLTCL1-201ENST00000412649 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
CLTCL1-201ENST00000412649 SMC4Q9NTJ3 1288 aa17.36■□□□□ 0.37
CLTCL1-201ENST00000412649 R3HCC1Q9Y3T6 440 aaKnown RBP17.36■□□□□ 0.37
CLTCL1-201ENST00000412649 KIAA1107Q9UPP5 1409 aa17.36■□□□□ 0.37
CLTCL1-201ENST00000412649 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
CLTCL1-201ENST00000412649 TPRNQ4KMQ1 711 aa17.36■□□□□ 0.37
CLTCL1-201ENST00000412649 BCAR3O75815 825 aa17.35■□□□□ 0.37
CLTCL1-201ENST00000412649 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
CLTCL1-201ENST00000412649 CCDC173Q0VFZ6 552 aa17.35■□□□□ 0.37
CLTCL1-201ENST00000412649 CSPP1Q1MSJ5 1256 aa17.35■□□□□ 0.37
CLTCL1-201ENST00000412649 MTERF4Q7Z6M4 381 aaKnown RBP17.34■□□□□ 0.37
CLTCL1-201ENST00000412649 RRAGDQ9NQL2 400 aaPredicted RBP17.34■□□□□ 0.37
CLTCL1-201ENST00000412649 RBM10P98175 930 aaKnown RBP17.34■□□□□ 0.37
CLTCL1-201ENST00000412649 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
CLTCL1-201ENST00000412649 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.37
CLTCL1-201ENST00000412649 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.37
CLTCL1-201ENST00000412649 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.37
CLTCL1-201ENST00000412649 XRCC6P12956 609 aaKnown RBP eCLIP17.33■□□□□ 0.37
CLTCL1-201ENST00000412649 PDZRN3Q9UPQ7 1066 aa17.33■□□□□ 0.37
CLTCL1-201ENST00000412649 PLEKHH2Q8IVE3 1493 aa17.33■□□□□ 0.37
CLTCL1-201ENST00000412649 DHX29Q7Z478 1369 aaKnown RBP17.32■□□□□ 0.36
CLTCL1-201ENST00000412649 ZKSCAN2Q63HK3 967 aa17.32■□□□□ 0.36
CLTCL1-201ENST00000412649 PDCL3Q9H2J4 239 aa17.32■□□□□ 0.36
CLTCL1-201ENST00000412649 PPP2R1AP30153 589 aa17.31■□□□□ 0.36
CLTCL1-201ENST00000412649 SYAP1Q96A49 352 aaPredicted RBP17.31■□□□□ 0.36
CLTCL1-201ENST00000412649 A0A0U1RQG5 324 aaPredicted RBP17.3■□□□□ 0.36
CLTCL1-201ENST00000412649 CFAP43Q8NDM7 1665 aa17.3■□□□□ 0.36
CLTCL1-201ENST00000412649 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
CLTCL1-201ENST00000412649 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLTCL1-201ENST00000412649 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
CLTCL1-201ENST00000412649 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
CLTCL1-201ENST00000412649 ROCK1Q13464 1354 aa17.29■□□□□ 0.36
CLTCL1-201ENST00000412649 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
CLTCL1-201ENST00000412649 ANKRD50Q9ULJ7 1429 aa17.29■□□□□ 0.36
CLTCL1-201ENST00000412649 DAPK1P53355 1430 aa17.29■□□□□ 0.36
CLTCL1-201ENST00000412649 PANK2Q9BZ23 570 aa17.28■□□□□ 0.36
CLTCL1-201ENST00000412649 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
CLTCL1-201ENST00000412649 SLFN5Q08AF3 891 aa17.27■□□□□ 0.36
CLTCL1-201ENST00000412649 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.35
CLTCL1-201ENST00000412649 DUSP27Q5VZP5 1158 aa17.26■□□□□ 0.35
CLTCL1-201ENST00000412649 ZSCAN30Q86W11 494 aa17.26■□□□□ 0.35
CLTCL1-201ENST00000412649 LRPPRCP42704 1394 aaKnown RBP17.25■□□□□ 0.35
CLTCL1-201ENST00000412649 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLTCL1-201ENST00000412649 DDX19BQ9UMR2 479 aa17.25■□□□□ 0.35
CLTCL1-201ENST00000412649 NBPF1Q3BBV0 1214 aa17.24■□□□□ 0.35
CLTCL1-201ENST00000412649 ST18O60284 1047 aa17.22■□□□□ 0.35
CLTCL1-201ENST00000412649 MCTP1Q6DN14 999 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms