RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.88■■□□□ 1.251e-10■■■■□ 24.8
GRAMD1A-202ENST00000411896 MAST1Q9Y2H9 1570 aa22.87■■□□□ 1.25
GRAMD1A-202ENST00000411896 PPP4R2Q9NY27 417 aa22.87■■□□□ 1.25
GRAMD1A-202ENST00000411896 ANP32EQ9BTT0 268 aa22.86■■□□□ 1.25
GRAMD1A-202ENST00000411896 ERCC6L2Q5T890 1561 aa22.85■■□□□ 1.25
GRAMD1A-202ENST00000411896 UNC13BO14795 1591 aa22.85■■□□□ 1.25
GRAMD1A-202ENST00000411896 SMG6Q86US8 1419 aaKnown RBP22.82■■□□□ 1.24
GRAMD1A-202ENST00000411896 PLA2R1Q13018 1463 aa22.82■■□□□ 1.24
GRAMD1A-202ENST00000411896 CCDC144AA2RUR9 1427 aa22.82■■□□□ 1.24
GRAMD1A-202ENST00000411896 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
GRAMD1A-202ENST00000411896 ABCC2Q92887 1545 aa22.81■■□□□ 1.24
GRAMD1A-202ENST00000411896 TRPM1Q7Z4N2 1603 aa22.81■■□□□ 1.24
GRAMD1A-202ENST00000411896 E9PCH4 1651 aa22.8■■□□□ 1.24
GRAMD1A-202ENST00000411896 PNISRQ8TF01 805 aaKnown RBP22.8■■□□□ 1.24
GRAMD1A-202ENST00000411896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.79■■□□□ 1.244e-8■■■□□ 15.2
GRAMD1A-202ENST00000411896 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
GRAMD1A-202ENST00000411896 PLXNC1O60486 1568 aa22.79■■□□□ 1.24
GRAMD1A-202ENST00000411896 PLEKHH2Q8IVE3 1493 aa22.78■■□□□ 1.24
GRAMD1A-202ENST00000411896 TMC1Q8TDI8 760 aa22.76■■□□□ 1.23
GRAMD1A-202ENST00000411896 A2MP01023 1474 aa22.76■■□□□ 1.23
GRAMD1A-202ENST00000411896 IQGAP3Q86VI3 1631 aa22.76■■□□□ 1.23
GRAMD1A-202ENST00000411896 RGL3Q3MIN7 710 aa22.76■■□□□ 1.23
GRAMD1A-202ENST00000411896 B4GALNT3Q6L9W6 998 aa22.76■■□□□ 1.23
GRAMD1A-202ENST00000411896 NUDCQ9Y266 331 aa22.76■■□□□ 1.23
GRAMD1A-202ENST00000411896 SENP3-EIF4A1A0A087X0R7 540 aa22.75■■□□□ 1.23
GRAMD1A-202ENST00000411896 NBPF1Q3BBV0 1214 aa22.74■■□□□ 1.23
GRAMD1A-202ENST00000411896 MYBBP1AQ9BQG0 1328 aaKnown RBP22.73■■□□□ 1.23
GRAMD1A-202ENST00000411896 DUOX2Q9NRD8 1548 aa22.72■■□□□ 1.23
GRAMD1A-202ENST00000411896 LRPPRCP42704 1394 aaKnown RBP22.71■■□□□ 1.23
GRAMD1A-202ENST00000411896 GPRASP1Q5JY77 1395 aa22.71■■□□□ 1.23
GRAMD1A-202ENST00000411896 BRD4O60885 1362 aaPredicted RBP22.71■■□□□ 1.23
GRAMD1A-202ENST00000411896 RALBP1Q15311 655 aa22.71■■□□□ 1.23
GRAMD1A-202ENST00000411896 KTN1Q86UP2 1357 aaKnown RBP22.7■■□□□ 1.23
GRAMD1A-202ENST00000411896 MAGI2Q86UL8 1455 aa22.7■■□□□ 1.22
GRAMD1A-202ENST00000411896 RNF123Q5XPI4 1314 aa22.69■■□□□ 1.22
GRAMD1A-202ENST00000411896 PLCH2O75038 1416 aa22.68■■□□□ 1.22
GRAMD1A-202ENST00000411896 ZCCHC11Q5TAX3 1644 aaKnown RBP22.68■■□□□ 1.22
GRAMD1A-202ENST00000411896 ERBINQ96RT1 1412 aa22.67■■□□□ 1.22
GRAMD1A-202ENST00000411896 PRDM15P57071 1507 aaPredicted RBP22.67■■□□□ 1.22
GRAMD1A-202ENST00000411896 LAMC1P11047 1609 aa22.67■■□□□ 1.22
GRAMD1A-202ENST00000411896 MSH5O43196 834 aa22.67■■□□□ 1.22
GRAMD1A-202ENST00000411896 ATP10AO60312 1499 aa22.65■■□□□ 1.22
GRAMD1A-202ENST00000411896 COL17A1Q9UMD9 1497 aaPredicted RBP22.65■■□□□ 1.22
GRAMD1A-202ENST00000411896 FANCIQ9NVI1 1328 aa22.64■■□□□ 1.22
GRAMD1A-202ENST00000411896 ABCC1P33527 1531 aa22.64■■□□□ 1.22
GRAMD1A-202ENST00000411896 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
GRAMD1A-202ENST00000411896 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
GRAMD1A-202ENST00000411896 TRAPPC8Q9Y2L5 1435 aa22.63■■□□□ 1.21
GRAMD1A-202ENST00000411896 EIF2AK4Q9P2K8 1649 aaKnown RBP22.62■■□□□ 1.21
GRAMD1A-202ENST00000411896 EFCAB2Q5VUJ9 269 aa22.62■■□□□ 1.21
GRAMD1A-202ENST00000411896 TESK2Q96S53 571 aa22.62■■□□□ 1.21
GRAMD1A-202ENST00000411896 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
GRAMD1A-202ENST00000411896 UHRF1BP1LA0JNW5 1464 aa22.61■■□□□ 1.21
GRAMD1A-202ENST00000411896 PER1O15534 1290 aaPredicted RBP22.61■■□□□ 1.21
GRAMD1A-202ENST00000411896 NLRP13Q86W25 1043 aa22.59■■□□□ 1.21
GRAMD1A-202ENST00000411896 RNF17Q9BXT8 1623 aaKnown RBP22.56■■□□□ 1.2
GRAMD1A-202ENST00000411896 SPAG9O60271 1321 aaKnown RBP22.52■■□□□ 1.2
GRAMD1A-202ENST00000411896 CC2D1BQ5T0F9 858 aaKnown RBP22.52■■□□□ 1.19
GRAMD1A-202ENST00000411896 PANK3Q9H999 370 aa22.52■■□□□ 1.19
GRAMD1A-202ENST00000411896 ZFYVE16Q7Z3T8 1539 aa22.51■■□□□ 1.19
GRAMD1A-202ENST00000411896 TMF1P82094 1093 aa22.51■■□□□ 1.19
GRAMD1A-202ENST00000411896 AFAP1Q8N556 730 aa22.5■■□□□ 1.19
GRAMD1A-202ENST00000411896 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
GRAMD1A-202ENST00000411896 WASHC2CQ9Y4E1 1318 aa22.49■■□□□ 1.19
GRAMD1A-202ENST00000411896 MADDQ8WXG6 1647 aa22.49■■□□□ 1.19
GRAMD1A-202ENST00000411896 SALL2Q9Y467 1007 aaPredicted RBP22.49■■□□□ 1.19
GRAMD1A-202ENST00000411896 RTEL1-TNFRSF6BF6WH68 1400 aa22.48■■□□□ 1.19
GRAMD1A-202ENST00000411896 PRKCSHP14314 528 aaPredicted RBP22.48■■□□□ 1.19
GRAMD1A-202ENST00000411896 TRPM2O94759 1503 aa22.47■■□□□ 1.19
GRAMD1A-202ENST00000411896 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
GRAMD1A-202ENST00000411896 RRP1P56182 461 aaKnown RBP22.45■■□□□ 1.18
GRAMD1A-202ENST00000411896 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
GRAMD1A-202ENST00000411896 CLTCL1P53675 1640 aa22.44■■□□□ 1.18
GRAMD1A-202ENST00000411896 PTPRTO14522 1441 aa22.44■■□□□ 1.18
GRAMD1A-202ENST00000411896 DEPDC5O75140 1603 aa22.43■■□□□ 1.18
GRAMD1A-202ENST00000411896 SPHKAPQ2M3C7 1700 aa22.43■■□□□ 1.18
GRAMD1A-202ENST00000411896 CEP152O94986 1710 aa22.43■■□□□ 1.18
GRAMD1A-202ENST00000411896 BLMP54132 1417 aaPredicted RBP22.42■■□□□ 1.18
GRAMD1A-202ENST00000411896 RCAN3Q9UKA8 241 aa22.42■■□□□ 1.18
GRAMD1A-202ENST00000411896 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
GRAMD1A-202ENST00000411896 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
GRAMD1A-202ENST00000411896 CDCA7LQ96GN5 454 aa22.39■■□□□ 1.18
GRAMD1A-202ENST00000411896 INSRP06213 1382 aa22.39■■□□□ 1.17
GRAMD1A-202ENST00000411896 TET3O43151 1660 aa22.39■■□□□ 1.17
GRAMD1A-202ENST00000411896 INO80Q9ULG1 1556 aaPredicted RBP22.39■■□□□ 1.17
GRAMD1A-202ENST00000411896 ATP7AQ04656 1500 aa22.38■■□□□ 1.17
GRAMD1A-202ENST00000411896 ABCA9Q8IUA7 1624 aa22.38■■□□□ 1.17
GRAMD1A-202ENST00000411896 ZMYM4Q5VZL5 1548 aa22.38■■□□□ 1.17
GRAMD1A-202ENST00000411896 EXOC6Q8TAG9 804 aa22.37■■□□□ 1.17
GRAMD1A-202ENST00000411896 VWDEQ8N2E2 1590 aa22.37■■□□□ 1.17
GRAMD1A-202ENST00000411896 FANCAO15360 1455 aa22.37■■□□□ 1.17
GRAMD1A-202ENST00000411896 SCAF11Q99590 1463 aaKnown RBP22.37■■□□□ 1.17
GRAMD1A-202ENST00000411896 ERICH6Q7L0X2 663 aa22.36■■□□□ 1.17
GRAMD1A-202ENST00000411896 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
GRAMD1A-202ENST00000411896 KANK1Q14678 1352 aa22.33■■□□□ 1.17
GRAMD1A-202ENST00000411896 SYNMO15061 1565 aa22.32■■□□□ 1.16
GRAMD1A-202ENST00000411896 KIF3BO15066 747 aa22.32■■□□□ 1.16
GRAMD1A-202ENST00000411896 STAC3Q96MF2 364 aa22.31■■□□□ 1.16
GRAMD1A-202ENST00000411896 KNSTRNQ9Y448 316 aa22.31■■□□□ 1.16
GRAMD1A-202ENST00000411896 MROH1Q8NDA8 1641 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms