RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 EFCAB5A4FU69 1503 aa9.75□□□□□ -0.85
SH3D19-203ENST00000409598 ASXL2Q76L83 1435 aa9.75□□□□□ -0.85
SH3D19-203ENST00000409598 LMTK3Q96Q04 1460 aa9.75□□□□□ -0.85
SH3D19-203ENST00000409598 MINK1Q8N4C8 1332 aaPredicted RBP9.75□□□□□ -0.85
SH3D19-203ENST00000409598 MSH6P52701 1360 aa9.75□□□□□ -0.85
SH3D19-203ENST00000409598 FANCAO15360 1455 aa9.74□□□□□ -0.85
SH3D19-203ENST00000409598 TTC5Q8N0Z6 440 aa9.74□□□□□ -0.85
SH3D19-203ENST00000409598 PEG3Q9GZU2 1588 aa9.74□□□□□ -0.85
SH3D19-203ENST00000409598 PRDM11Q9NQV5 511 aa9.73□□□□□ -0.85
SH3D19-203ENST00000409598 NLRP2Q9NX02 1062 aa9.73□□□□□ -0.85
SH3D19-203ENST00000409598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.73□□□□□ -0.85
SH3D19-203ENST00000409598 STRN4Q9NRL3 753 aa9.73□□□□□ -0.85
SH3D19-203ENST00000409598 TIMELESSQ9UNS1 1208 aa9.73□□□□□ -0.85
SH3D19-203ENST00000409598 OS9Q13438 667 aaPredicted RBP9.72□□□□□ -0.85
SH3D19-203ENST00000409598 SLC26A8Q96RN1 970 aa9.72□□□□□ -0.85
SH3D19-203ENST00000409598 CASKIN1Q8WXD9 1431 aa9.72□□□□□ -0.85
SH3D19-203ENST00000409598 WDR62O43379 1518 aa9.72□□□□□ -0.85
SH3D19-203ENST00000409598 TOP2BQ02880 1626 aa9.72□□□□□ -0.85
SH3D19-203ENST00000409598 CEBPAP49715 358 aaPredicted RBP9.71□□□□□ -0.85
SH3D19-203ENST00000409598 KANK4Q5T7N3 995 aaPredicted RBP9.71□□□□□ -0.85
SH3D19-203ENST00000409598 NLRP13Q86W25 1043 aa9.71□□□□□ -0.85
SH3D19-203ENST00000409598 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
SH3D19-203ENST00000409598 CUL7Q14999 1698 aa9.71□□□□□ -0.86
SH3D19-203ENST00000409598 UHRF1BP1Q6BDS2 1440 aa9.71□□□□□ -0.86
SH3D19-203ENST00000409598 LMOD3Q0VAK6 560 aa9.71□□□□□ -0.86
SH3D19-203ENST00000409598 TAF7LQ5H9L4 462 aa9.7□□□□□ -0.86
SH3D19-203ENST00000409598 MRS2Q9HD23 443 aa9.7□□□□□ -0.86
SH3D19-203ENST00000409598 FAM9BQ8IZU0 186 aa9.7□□□□□ -0.86
SH3D19-203ENST00000409598 UNC13AQ9UPW8 1703 aa9.7□□□□□ -0.86
SH3D19-203ENST00000409598 RPGRIP1LQ68CZ1 1315 aa9.7□□□□□ -0.86
SH3D19-203ENST00000409598 EPRSP07814 1512 aaKnown RBP9.7□□□□□ -0.86
SH3D19-203ENST00000409598 FAM135AQ9P2D6 1515 aa9.7□□□□□ -0.86
SH3D19-203ENST00000409598 FYCO1Q9BQS8 1478 aa9.7□□□□□ -0.86
SH3D19-203ENST00000409598 NBPF8Q3BBV2 869 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 NBPF14Q5TI25 921 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 HECW1Q76N89 1606 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 USP35Q9P2H5 1018 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 NLRP6P59044 892 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 TEFQ10587 303 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 TNRQ92752 1358 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 MS4A1P11836 297 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 FKBP8Q14318 412 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 ABTB2Q8N961 1025 aa9.69□□□□□ -0.86
SH3D19-203ENST00000409598 MIA2Q96PC5 1412 aa9.68□□□□□ -0.86
SH3D19-203ENST00000409598 ADAMTS2O95450 1211 aa9.68□□□□□ -0.86
SH3D19-203ENST00000409598 HSPA2P54652 639 aa9.68□□□□□ -0.86
SH3D19-203ENST00000409598 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
SH3D19-203ENST00000409598 CNTLNQ9NXG0 1405 aa9.68□□□□□ -0.86
SH3D19-203ENST00000409598 MIER1Q8N108 512 aa9.68□□□□□ -0.86
SH3D19-203ENST00000409598 NEUROD2Q15784 382 aa9.68□□□□□ -0.86
SH3D19-203ENST00000409598 DDX10Q13206 875 aaKnown RBP9.68□□□□□ -0.86
SH3D19-203ENST00000409598 ANKRD50Q9ULJ7 1429 aa9.67□□□□□ -0.86
SH3D19-203ENST00000409598 ANO8Q9HCE9 1232 aaPredicted RBP9.67□□□□□ -0.86
SH3D19-203ENST00000409598 STK31Q9BXU1 1019 aa9.67□□□□□ -0.86
SH3D19-203ENST00000409598 WDR7Q9Y4E6 1490 aa9.67□□□□□ -0.86
SH3D19-203ENST00000409598 RRBP1Q9P2E9 1410 aaKnown RBP9.66□□□□□ -0.86
SH3D19-203ENST00000409598 HSP90B1P14625 803 aaKnown RBP9.66□□□□□ -0.86
SH3D19-203ENST00000409598 CC2D1BQ5T0F9 858 aaKnown RBP9.66□□□□□ -0.86
SH3D19-203ENST00000409598 HIRIP3Q9BW71 556 aaPredicted RBP9.66□□□□□ -0.86
SH3D19-203ENST00000409598 KIF21BO75037 1637 aa9.66□□□□□ -0.86
SH3D19-203ENST00000409598 ISY1Q9ULR0 285 aaKnown RBP9.66□□□□□ -0.86
SH3D19-203ENST00000409598 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.86
SH3D19-203ENST00000409598 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
SH3D19-203ENST00000409598 FRAT2O75474 233 aaPredicted RBP9.65□□□□□ -0.86
SH3D19-203ENST00000409598 U2AF1L5P0DN76 240 aaPredicted RBP9.64□□□□□ -0.87
SH3D19-203ENST00000409598 U2AF1Q01081 240 aaKnown RBP eCLIP9.64□□□□□ -0.87
SH3D19-203ENST00000409598 FTSJ3Q8IY81 847 aaKnown RBP9.64□□□□□ -0.87
SH3D19-203ENST00000409598 TATP17735 454 aaPredicted RBP9.64□□□□□ -0.87
SH3D19-203ENST00000409598 ZNF644Q9H582 1327 aaPredicted RBP9.64□□□□□ -0.87
SH3D19-203ENST00000409598 CENPJQ9HC77 1338 aaPredicted RBP9.64□□□□□ -0.87
SH3D19-203ENST00000409598 UPF2Q9HAU5 1272 aaKnown RBP9.63□□□□□ -0.87
SH3D19-203ENST00000409598 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
SH3D19-203ENST00000409598 ZNF692Q9BU19 519 aaPredicted RBP9.63□□□□□ -0.87
SH3D19-203ENST00000409598 NCOA2Q15596 1464 aa9.63□□□□□ -0.87
SH3D19-203ENST00000409598 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
SH3D19-203ENST00000409598 CWC22Q9HCG8 908 aaKnown RBP9.62□□□□□ -0.87
SH3D19-203ENST00000409598 ROCK1Q13464 1354 aa9.62□□□□□ -0.87
SH3D19-203ENST00000409598 GORABQ5T7V8 394 aa9.62□□□□□ -0.87
SH3D19-203ENST00000409598 LRRC59Q96AG4 307 aaKnown RBP9.61□□□□□ -0.87
SH3D19-203ENST00000409598 KIF14Q15058 1648 aa9.61□□□□□ -0.87
SH3D19-203ENST00000409598 RUSC2Q8N2Y8 1516 aa9.6□□□□□ -0.87
SH3D19-203ENST00000409598 KCNH5Q8NCM2 988 aa9.6□□□□□ -0.87
SH3D19-203ENST00000409598 RBM33Q96EV2 1170 aaKnown RBP9.6□□□□□ -0.87
SH3D19-203ENST00000409598 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
SH3D19-203ENST00000409598 CHMP3Q9Y3E7 222 aa9.6□□□□□ -0.87
SH3D19-203ENST00000409598 ABCC2Q92887 1545 aa9.6□□□□□ -0.87
SH3D19-203ENST00000409598 EHBP1L1Q8N3D4 1523 aa9.6□□□□□ -0.87
SH3D19-203ENST00000409598 SIN3AQ96ST3 1273 aa9.6□□□□□ -0.87
SH3D19-203ENST00000409598 WDHD1O75717 1129 aaPredicted RBP9.59□□□□□ -0.87
SH3D19-203ENST00000409598 HSP90AB1P08238 724 aaKnown RBP9.59□□□□□ -0.87
SH3D19-203ENST00000409598 PMFBP1Q8TBY8 1022 aa9.59□□□□□ -0.87
SH3D19-203ENST00000409598 NOL10Q9BSC4 688 aaKnown RBP9.59□□□□□ -0.87
SH3D19-203ENST00000409598 AMOTL2Q9Y2J4 779 aa9.59□□□□□ -0.87
SH3D19-203ENST00000409598 POLD1P28340 1107 aa9.59□□□□□ -0.87
SH3D19-203ENST00000409598 HNRNPUQ00839 825 aaKnown RBP eCLIP9.59□□□□□ -0.87
SH3D19-203ENST00000409598 NUTM2GQ5VZR2 741 aa9.59□□□□□ -0.87
SH3D19-203ENST00000409598 CASC1Q6TDU7 716 aa9.59□□□□□ -0.87
SH3D19-203ENST00000409598 C8orf37Q96NL8 207 aa9.59□□□□□ -0.87
SH3D19-203ENST00000409598 TRIM34Q9BYJ4 488 aa9.59□□□□□ -0.87
SH3D19-203ENST00000409598 CCDC141Q6ZP82 1450 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms