RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
SH3D19-203ENST00000409598 NISCHQ9Y2I1 1504 aa13.62□□□□□ -0.23
SH3D19-203ENST00000409598 FAM9AQ8IZU1 332 aaPredicted RBP12.75□□□□□ -0.37
SH3D19-203ENST00000409598 ABCC9O60706 1549 aa12.41□□□□□ -0.42
SH3D19-203ENST00000409598 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
SH3D19-203ENST00000409598 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
SH3D19-203ENST00000409598 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
SH3D19-203ENST00000409598 APLP2Q06481 763 aa12.07□□□□□ -0.48
SH3D19-203ENST00000409598 ATP1B4Q9UN42 357 aaPredicted RBP11.84□□□□□ -0.51
SH3D19-203ENST00000409598 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
SH3D19-203ENST00000409598 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
SH3D19-203ENST00000409598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
SH3D19-203ENST00000409598 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
SH3D19-203ENST00000409598 TTBK1Q5TCY1 1321 aaPredicted RBP11.71□□□□□ -0.54
SH3D19-203ENST00000409598 RANGAP1P46060 587 aaPredicted RBP11.7□□□□□ -0.54
SH3D19-203ENST00000409598 FBLN2P98095 1184 aa11.7□□□□□ -0.54
SH3D19-203ENST00000409598 TRIM41Q8WV44 630 aa11.68□□□□□ -0.54
SH3D19-203ENST00000409598 RB1CC1Q8TDY2 1594 aa11.66□□□□□ -0.54
SH3D19-203ENST00000409598 UBTFP17480 764 aaKnown RBP11.63□□□□□ -0.55
SH3D19-203ENST00000409598 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
SH3D19-203ENST00000409598 CCDC180Q9P1Z9 1646 aa11.58□□□□□ -0.56
SH3D19-203ENST00000409598 SCRIBQ14160 1630 aa11.48□□□□□ -0.57
SH3D19-203ENST00000409598 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
SH3D19-203ENST00000409598 NACADO15069 1562 aa11.44□□□□□ -0.58
SH3D19-203ENST00000409598 ESF1Q9H501 851 aaKnown RBP11.41□□□□□ -0.58
SH3D19-203ENST00000409598 CHIC1Q5VXU3 224 aa11.3□□□□□ -0.6
SH3D19-203ENST00000409598 CHMP7Q8WUX9 453 aaPredicted RBP11.3□□□□□ -0.6
SH3D19-203ENST00000409598 TRHP20396 242 aaPredicted RBP11.29□□□□□ -0.6
SH3D19-203ENST00000409598 CDK11AQ9UQ88 783 aaPredicted RBP11.23□□□□□ -0.61
SH3D19-203ENST00000409598 BCANQ96GW7 911 aa11.17□□□□□ -0.62
SH3D19-203ENST00000409598 ZCCHC6Q5VYS8 1495 aaKnown RBP11.16□□□□□ -0.62
SH3D19-203ENST00000409598 PELP1Q8IZL8 1130 aaKnown RBP11.15□□□□□ -0.62
SH3D19-203ENST00000409598 AEBP2Q6ZN18 517 aaPredicted RBP11.14□□□□□ -0.63
SH3D19-203ENST00000409598 BAZ1BQ9UIG0 1483 aaKnown RBP11.11□□□□□ -0.63
SH3D19-203ENST00000409598 PLPPR3Q6T4P5 718 aa11.1□□□□□ -0.63
SH3D19-203ENST00000409598 CECR2Q9BXF3 1484 aa11.09□□□□□ -0.63
SH3D19-203ENST00000409598 PDS5BQ9NTI5 1447 aa11.07□□□□□ -0.64
SH3D19-203ENST00000409598 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
SH3D19-203ENST00000409598 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.65
SH3D19-203ENST00000409598 ITGAEP38570 1179 aa11□□□□□ -0.65
SH3D19-203ENST00000409598 PCGF6Q9BYE7 350 aa10.99□□□□□ -0.65
SH3D19-203ENST00000409598 ARID3CA6NKF2 412 aa10.98□□□□□ -0.65
SH3D19-203ENST00000409598 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
SH3D19-203ENST00000409598 ZNF777Q9ULD5 760 aaPredicted RBP10.96□□□□□ -0.66
SH3D19-203ENST00000409598 MYT1Q01538 1121 aa10.95□□□□□ -0.66
SH3D19-203ENST00000409598 P3H3Q8IVL6 736 aa10.94□□□□□ -0.66
SH3D19-203ENST00000409598 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
SH3D19-203ENST00000409598 FAM50AQ14320 339 aaKnown RBP10.92□□□□□ -0.66
SH3D19-203ENST00000409598 TRIM52Q96A61 297 aa10.91□□□□□ -0.66
SH3D19-203ENST00000409598 SMARCA2P51531 1590 aa10.89□□□□□ -0.67
SH3D19-203ENST00000409598 DCAF1Q9Y4B6 1507 aa10.89□□□□□ -0.67
SH3D19-203ENST00000409598 KCNH8Q96L42 1107 aa10.88□□□□□ -0.67
SH3D19-203ENST00000409598 PLEKHD1A6NEE1 506 aa10.87□□□□□ -0.67
SH3D19-203ENST00000409598 BAZ1AQ9NRL2 1556 aaPredicted RBP10.87□□□□□ -0.67
SH3D19-203ENST00000409598 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
SH3D19-203ENST00000409598 HRCP23327 699 aa10.84□□□□□ -0.67
SH3D19-203ENST00000409598 MYO15BQ96JP2 1530 aa10.83□□□□□ -0.68
SH3D19-203ENST00000409598 CHGAP10645 457 aaKnown RBP10.81□□□□□ -0.68
SH3D19-203ENST00000409598 TSPY4P0CV99 314 aa10.81□□□□□ -0.68
SH3D19-203ENST00000409598 TSPY10P0CW01 314 aa10.81□□□□□ -0.68
SH3D19-203ENST00000409598 POLR3GLQ9BT43 218 aa10.8□□□□□ -0.68
SH3D19-203ENST00000409598 C14orf37Q86TY3 774 aa10.8□□□□□ -0.68
SH3D19-203ENST00000409598 CCER1Q8TC90 406 aaPredicted RBP10.79□□□□□ -0.68
SH3D19-203ENST00000409598 PPP1R15AO75807 674 aaPredicted RBP10.77□□□□□ -0.69
SH3D19-203ENST00000409598 CYB5RLQ6IPT4 315 aa10.76□□□□□ -0.69
SH3D19-203ENST00000409598 CARMIL2Q6F5E8 1435 aa10.74□□□□□ -0.69
SH3D19-203ENST00000409598 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
SH3D19-203ENST00000409598 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
SH3D19-203ENST00000409598 CENPBP07199 599 aaPredicted RBP10.72□□□□□ -0.69
SH3D19-203ENST00000409598 ZEB1P37275 1124 aaPredicted RBP10.72□□□□□ -0.69
SH3D19-203ENST00000409598 CEP164Q9UPV0 1460 aa10.72□□□□□ -0.69
SH3D19-203ENST00000409598 KIF27Q86VH2 1401 aa10.71□□□□□ -0.69
SH3D19-203ENST00000409598 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
SH3D19-203ENST00000409598 SCAF1Q9H7N4 1312 aaKnown RBP10.69□□□□□ -0.7
SH3D19-203ENST00000409598 HDGFP51858 240 aaKnown RBP10.68□□□□□ -0.7
SH3D19-203ENST00000409598 PPARGC1BQ86YN6 1023 aaKnown RBP10.67□□□□□ -0.7
SH3D19-203ENST00000409598 NEFMP07197 916 aa10.67□□□□□ -0.7
SH3D19-203ENST00000409598 ABCC8Q09428 1581 aa10.66□□□□□ -0.7
SH3D19-203ENST00000409598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.65□□□□□ -0.72e-8■■□□□ 12
SH3D19-203ENST00000409598 SOGA1O94964 1423 aa10.65□□□□□ -0.71
SH3D19-203ENST00000409598 MTUS2Q5JR59 1369 aa10.64□□□□□ -0.71
SH3D19-203ENST00000409598 ZNF326Q5BKZ1 582 aaKnown RBP10.62□□□□□ -0.71
SH3D19-203ENST00000409598 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
SH3D19-203ENST00000409598 MLECQ14165 292 aa10.62□□□□□ -0.71
SH3D19-203ENST00000409598 SLC24A1O60721 1099 aa10.6□□□□□ -0.71
SH3D19-203ENST00000409598 ATAD2BQ9ULI0 1458 aa10.58□□□□□ -0.72
SH3D19-203ENST00000409598 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
SH3D19-203ENST00000409598 ACIN1Q9UKV3 1341 aaKnown RBP10.57□□□□□ -0.72
SH3D19-203ENST00000409598 EIF4G1Q04637 1599 aaKnown RBP10.57□□□□□ -0.72
SH3D19-203ENST00000409598 CUX2O14529 1486 aa10.57□□□□□ -0.72
SH3D19-203ENST00000409598 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
SH3D19-203ENST00000409598 CFDP1Q9UEE9 299 aaPredicted RBP10.57□□□□□ -0.72
SH3D19-203ENST00000409598 A0A0G2JS52 829 aa10.55□□□□□ -0.72
SH3D19-203ENST00000409598 CLIP1P30622 1438 aa10.55□□□□□ -0.72
SH3D19-203ENST00000409598 EEA1Q15075 1411 aa10.54□□□□□ -0.72
SH3D19-203ENST00000409598 FANCD2Q9BXW9 1451 aa10.54□□□□□ -0.72
SH3D19-203ENST00000409598 NPM2Q86SE8 214 aaKnown RBP10.54□□□□□ -0.72
SH3D19-203ENST00000409598 FAM69CQ0P6D2 419 aa10.52□□□□□ -0.73
SH3D19-203ENST00000409598 CARMIL1Q5VZK9 1371 aa10.52□□□□□ -0.73
SH3D19-203ENST00000409598 EFCAB2Q5VUJ9 269 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms