RNA–Protein interactions for RNA: ENST00000409180.1

MRPL35-203, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene MRPL35, Length 651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-203ENST00000409180 ITSN2Q9NZM3 1697 aa11.39□□□□□ -0.59
MRPL35-203ENST00000409180 A2MP01023 1474 aa11.38□□□□□ -0.59
MRPL35-203ENST00000409180 CDC42BPBQ9Y5S2 1711 aa11.38□□□□□ -0.59
MRPL35-203ENST00000409180 POTEAQ6S8J7 498 aa11.38□□□□□ -0.59
MRPL35-203ENST00000409180 CLTCQ00610 1675 aaKnown RBP11.38□□□□□ -0.59
MRPL35-203ENST00000409180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.38□□□□□ -0.59
MRPL35-203ENST00000409180 NEURL4Q96JN8 1562 aa11.37□□□□□ -0.59
MRPL35-203ENST00000409180 DNMT1P26358 1616 aaKnown RBP11.37□□□□□ -0.59
MRPL35-203ENST00000409180 PREX2Q70Z35 1606 aa11.37□□□□□ -0.59
MRPL35-203ENST00000409180 TNRQ92752 1358 aa11.37□□□□□ -0.59
MRPL35-203ENST00000409180 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
MRPL35-203ENST00000409180 SYCP2Q9BX26 1530 aa11.36□□□□□ -0.59
MRPL35-203ENST00000409180 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
MRPL35-203ENST00000409180 SUPT6HQ7KZ85 1726 aaKnown RBP11.35□□□□□ -0.59
MRPL35-203ENST00000409180 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
MRPL35-203ENST00000409180 PLXNC1O60486 1568 aa11.34□□□□□ -0.59
MRPL35-203ENST00000409180 THEMISQ8N1K5 641 aaPredicted RBP11.34□□□□□ -0.59
MRPL35-203ENST00000409180 LRRC7Q96NW7 1537 aa11.33□□□□□ -0.6
MRPL35-203ENST00000409180 GPATCH8Q9UKJ3 1502 aaKnown RBP11.32□□□□□ -0.6
MRPL35-203ENST00000409180 CFDP1Q9UEE9 299 aaPredicted RBP11.32□□□□□ -0.6
MRPL35-203ENST00000409180 KIAA1107Q9UPP5 1409 aa11.31□□□□□ -0.6
MRPL35-203ENST00000409180 KIF3BO15066 747 aa11.3□□□□□ -0.6
MRPL35-203ENST00000409180 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
MRPL35-203ENST00000409180 MED14O60244 1454 aa11.3□□□□□ -0.6
MRPL35-203ENST00000409180 INO80Q9ULG1 1556 aaPredicted RBP11.29□□□□□ -0.6
MRPL35-203ENST00000409180 CASKIN1Q8WXD9 1431 aa11.29□□□□□ -0.6
MRPL35-203ENST00000409180 MIA2Q96PC5 1412 aa11.29□□□□□ -0.6
MRPL35-203ENST00000409180 CCDC18Q5T9S5 1454 aa11.29□□□□□ -0.6
MRPL35-203ENST00000409180 ZNF644Q9H582 1327 aaPredicted RBP11.29□□□□□ -0.6
MRPL35-203ENST00000409180 PZPP20742 1482 aa11.28□□□□□ -0.6
MRPL35-203ENST00000409180 PLEKHH2Q8IVE3 1493 aa11.28□□□□□ -0.6
MRPL35-203ENST00000409180 LRRIQ1Q96JM4 1722 aa11.28□□□□□ -0.6
MRPL35-203ENST00000409180 FAM135AQ9P2D6 1515 aa11.28□□□□□ -0.6
MRPL35-203ENST00000409180 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
MRPL35-203ENST00000409180 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
MRPL35-203ENST00000409180 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.61
MRPL35-203ENST00000409180 UGGT1Q9NYU2 1555 aa11.27□□□□□ -0.61
MRPL35-203ENST00000409180 CCNB3Q8WWL7 1395 aa11.27□□□□□ -0.61
MRPL35-203ENST00000409180 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
MRPL35-203ENST00000409180 NLRP1Q9C000 1473 aa11.26□□□□□ -0.61
MRPL35-203ENST00000409180 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
MRPL35-203ENST00000409180 RNF17Q9BXT8 1623 aaKnown RBP11.26□□□□□ -0.61
MRPL35-203ENST00000409180 FAM135BQ49AJ0 1406 aa11.23□□□□□ -0.61
MRPL35-203ENST00000409180 KDM5DQ9BY66 1539 aa11.23□□□□□ -0.61
MRPL35-203ENST00000409180 DEPDC5O75140 1603 aa11.23□□□□□ -0.61
MRPL35-203ENST00000409180 STRCP1A6NGW2 1772 aa11.22□□□□□ -0.61
MRPL35-203ENST00000409180 IQGAP1P46940 1657 aa11.22□□□□□ -0.61
MRPL35-203ENST00000409180 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
MRPL35-203ENST00000409180 MBD5Q9P267 1494 aa11.22□□□□□ -0.61
MRPL35-203ENST00000409180 SYNMO15061 1565 aa11.21□□□□□ -0.61
MRPL35-203ENST00000409180 RTEL1-TNFRSF6BF6WH68 1400 aa11.21□□□□□ -0.61
MRPL35-203ENST00000409180 LTKP29376 864 aa11.2□□□□□ -0.62
MRPL35-203ENST00000409180 TXNDC2Q86VQ3 553 aa11.2□□□□□ -0.62
MRPL35-203ENST00000409180 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
MRPL35-203ENST00000409180 SETD1AO15047 1707 aaKnown RBP11.19□□□□□ -0.62
MRPL35-203ENST00000409180 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
MRPL35-203ENST00000409180 ADGBQ8N7X0 1667 aa11.19□□□□□ -0.62
MRPL35-203ENST00000409180 FYCO1Q9BQS8 1478 aa11.19□□□□□ -0.62
MRPL35-203ENST00000409180 TMEM94Q12767 1356 aa11.18□□□□□ -0.62
MRPL35-203ENST00000409180 SCAF11Q99590 1463 aaKnown RBP11.18□□□□□ -0.62
MRPL35-203ENST00000409180 MTUS2Q5JR59 1369 aa11.17□□□□□ -0.62
MRPL35-203ENST00000409180 ERVK-7P63135 1459 aa11.15□□□□□ -0.62
MRPL35-203ENST00000409180 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
MRPL35-203ENST00000409180 PROSER2Q86WR7 435 aaPredicted RBP11.14□□□□□ -0.63
MRPL35-203ENST00000409180 EID1Q9Y6B2 187 aa11.14□□□□□ -0.63
MRPL35-203ENST00000409180 JCADQ9P266 1359 aa11.14□□□□□ -0.63
MRPL35-203ENST00000409180 ZC3H13Q5T200 1668 aaKnown RBP11.13□□□□□ -0.63
MRPL35-203ENST00000409180 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
MRPL35-203ENST00000409180 KCNA6P17658 529 aa11.12□□□□□ -0.63
MRPL35-203ENST00000409180 MEX3CQ5U5Q3 659 aaKnown RBP11.12□□□□□ -0.63
MRPL35-203ENST00000409180 ABCC3O15438 1527 aa11.12□□□□□ -0.63
MRPL35-203ENST00000409180 ARHGAP23Q9P227 1491 aa11.12□□□□□ -0.63
MRPL35-203ENST00000409180 TIAM1Q13009 1591 aa11.11□□□□□ -0.63
MRPL35-203ENST00000409180 ZNF772Q68DY9 489 aaPredicted RBP11.11□□□□□ -0.63
MRPL35-203ENST00000409180 SLC26A8Q96RN1 970 aa11.11□□□□□ -0.63
MRPL35-203ENST00000409180 SLAIN2Q9P270 581 aa11.11□□□□□ -0.63
MRPL35-203ENST00000409180 ROBO1Q9Y6N7 1651 aa11.11□□□□□ -0.63
MRPL35-203ENST00000409180 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
MRPL35-203ENST00000409180 SLIT1O75093 1534 aa11.09□□□□□ -0.63
MRPL35-203ENST00000409180 MAP3K1Q13233 1512 aa11.09□□□□□ -0.63
MRPL35-203ENST00000409180 LRP6O75581 1613 aa11.09□□□□□ -0.63
MRPL35-203ENST00000409180 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
MRPL35-203ENST00000409180 TSPY4P0CV99 314 aa11.09□□□□□ -0.63
MRPL35-203ENST00000409180 TSPY10P0CW01 314 aa11.09□□□□□ -0.63
MRPL35-203ENST00000409180 RXRBP28702 533 aa11.09□□□□□ -0.63
MRPL35-203ENST00000409180 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
MRPL35-203ENST00000409180 CAMSAP2Q08AD1 1489 aa11.08□□□□□ -0.64
MRPL35-203ENST00000409180 LRRC9Q6ZRR7 1453 aa11.08□□□□□ -0.64
MRPL35-203ENST00000409180 MSH6P52701 1360 aa11.08□□□□□ -0.64
MRPL35-203ENST00000409180 STAG3Q9UJ98 1225 aa11.08□□□□□ -0.64
MRPL35-203ENST00000409180 SPATA31A6Q5VVP1 1343 aa11.08□□□□□ -0.64
MRPL35-203ENST00000409180 XIRP1Q702N8 1843 aaKnown RBP11.07□□□□□ -0.64
MRPL35-203ENST00000409180 CEP162Q5TB80 1403 aa11.07□□□□□ -0.64
MRPL35-203ENST00000409180 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
MRPL35-203ENST00000409180 PRDM15P57071 1507 aaPredicted RBP11.05□□□□□ -0.64
MRPL35-203ENST00000409180 NUTM2BA6NNL0 878 aaPredicted RBP11.05□□□□□ -0.64
MRPL35-203ENST00000409180 NUTM2EB1AL46 878 aaPredicted RBP11.05□□□□□ -0.64
MRPL35-203ENST00000409180 NUTM2AQ8IVF1 878 aaPredicted RBP11.05□□□□□ -0.64
MRPL35-203ENST00000409180 BCANQ96GW7 911 aa11.05□□□□□ -0.64
MRPL35-203ENST00000409180 SPINK5Q9NQ38 1064 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms