RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 PLXNC1O60486 1568 aa14.79□□□□□ -0.04
NIF3L1-203ENST00000409129 TOM1O60784 492 aa14.79□□□□□ -0.04
NIF3L1-203ENST00000409129 CFDP1Q9UEE9 299 aaPredicted RBP14.79□□□□□ -0.04
NIF3L1-203ENST00000409129 SHANK2Q9UPX8 1470 aa14.79□□□□□ -0.04
NIF3L1-203ENST00000409129 SYCP2Q9BX26 1530 aa14.78□□□□□ -0.04
NIF3L1-203ENST00000409129 SPAG9O60271 1321 aaKnown RBP14.78□□□□□ -0.04
NIF3L1-203ENST00000409129 CCNB3Q8WWL7 1395 aa14.77□□□□□ -0.04
NIF3L1-203ENST00000409129 RGS17Q9UGC6 210 aaPredicted RBP14.77□□□□□ -0.05
NIF3L1-203ENST00000409129 A2ML1A8K2U0 1454 aa14.76□□□□□ -0.05
NIF3L1-203ENST00000409129 KIAA1107Q9UPP5 1409 aa14.76□□□□□ -0.05
NIF3L1-203ENST00000409129 MTUS2Q5JR59 1369 aa14.76□□□□□ -0.05
NIF3L1-203ENST00000409129 INO80Q9ULG1 1556 aaPredicted RBP14.76□□□□□ -0.05
NIF3L1-203ENST00000409129 ATP7AQ04656 1500 aa14.76□□□□□ -0.05
NIF3L1-203ENST00000409129 PLEKHH2Q8IVE3 1493 aa14.75□□□□□ -0.05
NIF3L1-203ENST00000409129 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
NIF3L1-203ENST00000409129 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
NIF3L1-203ENST00000409129 RNF17Q9BXT8 1623 aaKnown RBP14.72□□□□□ -0.05
NIF3L1-203ENST00000409129 ADGBQ8N7X0 1667 aa14.71□□□□□ -0.05
NIF3L1-203ENST00000409129 XIRP1Q702N8 1843 aaKnown RBP14.71□□□□□ -0.05
NIF3L1-203ENST00000409129 GGT6Q6P531 493 aa14.71□□□□□ -0.05
NIF3L1-203ENST00000409129 IQGAP1P46940 1657 aa14.71□□□□□ -0.06
NIF3L1-203ENST00000409129 A2MP01023 1474 aa14.7□□□□□ -0.06
NIF3L1-203ENST00000409129 ZNF644Q9H582 1327 aaPredicted RBP14.7□□□□□ -0.06
NIF3L1-203ENST00000409129 CEP162Q5TB80 1403 aa14.68□□□□□ -0.06
NIF3L1-203ENST00000409129 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
NIF3L1-203ENST00000409129 LRRC7Q96NW7 1537 aa14.66□□□□□ -0.06
NIF3L1-203ENST00000409129 DEPDC5O75140 1603 aa14.66□□□□□ -0.06
NIF3L1-203ENST00000409129 SYNMO15061 1565 aa14.66□□□□□ -0.06
NIF3L1-203ENST00000409129 TIAM1Q13009 1591 aa14.66□□□□□ -0.06
NIF3L1-203ENST00000409129 MBD5Q9P267 1494 aa14.66□□□□□ -0.06
NIF3L1-203ENST00000409129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.66□□□□□ -0.06
NIF3L1-203ENST00000409129 FBXO31Q5XUX0 539 aaPredicted RBP14.65□□□□□ -0.06
NIF3L1-203ENST00000409129 POTEAQ6S8J7 498 aa14.65□□□□□ -0.06
NIF3L1-203ENST00000409129 RTEL1-TNFRSF6BF6WH68 1400 aa14.64□□□□□ -0.07
NIF3L1-203ENST00000409129 NPHP4O75161 1426 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-203ENST00000409129 ZC3H13Q5T200 1668 aaKnown RBP14.64□□□□□ -0.07
NIF3L1-203ENST00000409129 TNRQ92752 1358 aa14.63□□□□□ -0.07
NIF3L1-203ENST00000409129 CFAP65Q6ZU64 1925 aaKnown RBP14.63□□□□□ -0.07
NIF3L1-203ENST00000409129 DHX29Q7Z478 1369 aaKnown RBP14.61□□□□□ -0.07
NIF3L1-203ENST00000409129 UGGT1Q9NYU2 1555 aa14.61□□□□□ -0.07
NIF3L1-203ENST00000409129 RSPH4AQ5TD94 716 aa14.61□□□□□ -0.07
NIF3L1-203ENST00000409129 MED14O60244 1454 aa14.61□□□□□ -0.07
NIF3L1-203ENST00000409129 NCOA2Q15596 1464 aa14.6□□□□□ -0.07
NIF3L1-203ENST00000409129 PZPP20742 1482 aa14.59□□□□□ -0.07
NIF3L1-203ENST00000409129 ANKLE2Q86XL3 938 aa14.59□□□□□ -0.07
NIF3L1-203ENST00000409129 LOC105371045A0A1W2PR82 267 aa14.58□□□□□ -0.08
NIF3L1-203ENST00000409129 CCDC141Q6ZP82 1450 aa14.57□□□□□ -0.08
NIF3L1-203ENST00000409129 KDM5DQ9BY66 1539 aa14.57□□□□□ -0.08
NIF3L1-203ENST00000409129 KIF3BO15066 747 aa14.57□□□□□ -0.08
NIF3L1-203ENST00000409129 CAMSAP2Q08AD1 1489 aa14.57□□□□□ -0.08
NIF3L1-203ENST00000409129 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
NIF3L1-203ENST00000409129 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
NIF3L1-203ENST00000409129 ROBO1Q9Y6N7 1651 aa14.55□□□□□ -0.08
NIF3L1-203ENST00000409129 FAM135AQ9P2D6 1515 aa14.55□□□□□ -0.08
NIF3L1-203ENST00000409129 UBR1Q8IWV7 1749 aa14.54□□□□□ -0.08
NIF3L1-203ENST00000409129 NLRP1Q9C000 1473 aa14.53□□□□□ -0.08
NIF3L1-203ENST00000409129 VPS8Q8N3P4 1428 aa14.53□□□□□ -0.08
NIF3L1-203ENST00000409129 WASHC2CQ9Y4E1 1318 aa14.53□□□□□ -0.08
NIF3L1-203ENST00000409129 LRRC9Q6ZRR7 1453 aa14.52□□□□□ -0.08
NIF3L1-203ENST00000409129 MIA2Q96PC5 1412 aa14.52□□□□□ -0.08
NIF3L1-203ENST00000409129 THEMISQ8N1K5 641 aaPredicted RBP14.52□□□□□ -0.09
NIF3L1-203ENST00000409129 ARHGEF5Q12774 1597 aa14.51□□□□□ -0.09
NIF3L1-203ENST00000409129 KANK4Q5T7N3 995 aaPredicted RBP14.5□□□□□ -0.09
NIF3L1-203ENST00000409129 CEP152O94986 1710 aa14.49□□□□□ -0.09
NIF3L1-203ENST00000409129 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
NIF3L1-203ENST00000409129 PHLPP1O60346 1717 aa14.48□□□□□ -0.09
NIF3L1-203ENST00000409129 MAP3K1Q13233 1512 aa14.47□□□□□ -0.09
NIF3L1-203ENST00000409129 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
NIF3L1-203ENST00000409129 FAM135BQ49AJ0 1406 aa14.45□□□□□ -0.1
NIF3L1-203ENST00000409129 SCAF11Q99590 1463 aaKnown RBP14.44□□□□□ -0.1
NIF3L1-203ENST00000409129 MAST1Q9Y2H9 1570 aa14.44□□□□□ -0.1
NIF3L1-203ENST00000409129 MYOM3Q5VTT5 1437 aa14.44□□□□□ -0.1
NIF3L1-203ENST00000409129 UPF1Q92900 1129 aaKnown RBP eCLIP14.44□□□□□ -0.1
NIF3L1-203ENST00000409129 SRCAPQ6ZRS2 3230 aa14.43□□□□□ -0.1
NIF3L1-203ENST00000409129 ABCC3O15438 1527 aa14.43□□□□□ -0.1
NIF3L1-203ENST00000409129 ERVK-7P63135 1459 aa14.43□□□□□ -0.1
NIF3L1-203ENST00000409129 RBM33Q96EV2 1170 aaKnown RBP14.42□□□□□ -0.1
NIF3L1-203ENST00000409129 LTKP29376 864 aa14.41□□□□□ -0.1
NIF3L1-203ENST00000409129 LRP6O75581 1613 aa14.41□□□□□ -0.1
NIF3L1-203ENST00000409129 APLP2Q06481 763 aa14.4□□□□□ -0.1
NIF3L1-203ENST00000409129 TRIM52Q96A61 297 aa14.4□□□□□ -0.1
NIF3L1-203ENST00000409129 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
NIF3L1-203ENST00000409129 MROH1Q8NDA8 1641 aa14.4□□□□□ -0.1
NIF3L1-203ENST00000409129 TMEM94Q12767 1356 aa14.39□□□□□ -0.11
NIF3L1-203ENST00000409129 COL16A1Q07092 1604 aaPredicted RBP14.39□□□□□ -0.11
NIF3L1-203ENST00000409129 ARHGAP23Q9P227 1491 aa14.38□□□□□ -0.11
NIF3L1-203ENST00000409129 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
NIF3L1-203ENST00000409129 EIF2AK4Q9P2K8 1649 aaKnown RBP14.38□□□□□ -0.11
NIF3L1-203ENST00000409129 SLIT1O75093 1534 aa14.38□□□□□ -0.11
NIF3L1-203ENST00000409129 DUOX2Q9NRD8 1548 aa14.37□□□□□ -0.11
NIF3L1-203ENST00000409129 RRP7BPQ9NSQ0 103 aa14.36□□□□□ -0.11
NIF3L1-203ENST00000409129 ABCC5O15440 1437 aa14.35□□□□□ -0.11
NIF3L1-203ENST00000409129 TXNDC2Q86VQ3 553 aa14.35□□□□□ -0.11
NIF3L1-203ENST00000409129 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
NIF3L1-203ENST00000409129 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
NIF3L1-203ENST00000409129 JCADQ9P266 1359 aa14.33□□□□□ -0.12
NIF3L1-203ENST00000409129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
NIF3L1-203ENST00000409129 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
NIF3L1-203ENST00000409129 ERBINQ96RT1 1412 aa14.32□□□□□ -0.12
NIF3L1-203ENST00000409129 NWD1Q149M9 1564 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms