RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 MLH3Q9UHC1 1453 aa8.9□□□□□ -0.99
CLIP4-202ENST00000401605 TRAPPC8Q9Y2L5 1435 aa8.9□□□□□ -0.99
CLIP4-202ENST00000401605 LOC105371045A0A1W2PR82 267 aa8.89□□□□□ -0.99
CLIP4-202ENST00000401605 ZNF777Q9ULD5 760 aaPredicted RBP8.89□□□□□ -0.99
CLIP4-202ENST00000401605 MTUS2Q5JR59 1369 aa8.89□□□□□ -0.99
CLIP4-202ENST00000401605 MYO5CQ9NQX4 1742 aa8.89□□□□□ -0.99
CLIP4-202ENST00000401605 KDM5CP41229 1560 aa8.89□□□□□ -0.99
CLIP4-202ENST00000401605 LMTK3Q96Q04 1460 aa8.89□□□□□ -0.99
CLIP4-202ENST00000401605 CFDP1Q9UEE9 299 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-202ENST00000401605 CCNB3Q8WWL7 1395 aa8.88□□□□□ -0.99
CLIP4-202ENST00000401605 MKRN4PQ13434 485 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-202ENST00000401605 ABCC1P33527 1531 aa8.88□□□□□ -0.99
CLIP4-202ENST00000401605 ARHGEF12Q9NZN5 1544 aa8.88□□□□□ -0.99
CLIP4-202ENST00000401605 GPATCH8Q9UKJ3 1502 aaKnown RBP8.88□□□□□ -0.99
CLIP4-202ENST00000401605 TAF7LQ5H9L4 462 aa8.87□□□□□ -0.99
CLIP4-202ENST00000401605 CEP162Q5TB80 1403 aa8.87□□□□□ -0.99
CLIP4-202ENST00000401605 HSPA2P54652 639 aa8.86□□□□□ -0.99
CLIP4-202ENST00000401605 ERICH6BQ5W0A0 696 aa8.86□□□□□ -0.99
CLIP4-202ENST00000401605 ESF1Q9H501 851 aaKnown RBP8.86□□□□□ -0.99
CLIP4-202ENST00000401605 KIAA1107Q9UPP5 1409 aa8.86□□□□□ -0.99
CLIP4-202ENST00000401605 SPAG9O60271 1321 aaKnown RBP8.86□□□□□ -0.99
CLIP4-202ENST00000401605 CEBPAP49715 358 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-202ENST00000401605 HNRNPMP52272 730 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLIP4-202ENST00000401605 NEUROD2Q15784 382 aa8.86□□□□□ -0.99
CLIP4-202ENST00000401605 PPARGC1BQ86YN6 1023 aaKnown RBP8.86□□□□□ -0.99
CLIP4-202ENST00000401605 PREX2Q70Z35 1606 aa8.86□□□□□ -0.99
CLIP4-202ENST00000401605 PLEKHH2Q8IVE3 1493 aa8.85□□□□□ -0.99
CLIP4-202ENST00000401605 RIMS1Q86UR5 1692 aaKnown RBP8.85□□□□□ -0.99
CLIP4-202ENST00000401605 REREQ9P2R6 1566 aa8.85□□□□□ -0.99
CLIP4-202ENST00000401605 LRRIQ1Q96JM4 1722 aa8.84□□□□□ -0.99
CLIP4-202ENST00000401605 AGLP35573 1532 aa8.84□□□□□ -0.99
CLIP4-202ENST00000401605 DIP2CQ9Y2E4 1556 aa8.84□□□□□ -0.99
CLIP4-202ENST00000401605 SIGLEC1Q9BZZ2 1709 aa8.84□□□□□ -0.99
CLIP4-202ENST00000401605 LMOD2Q6P5Q4 547 aa8.83□□□□□ -1
CLIP4-202ENST00000401605 CDC42BPBQ9Y5S2 1711 aa8.82□□□□□ -1
CLIP4-202ENST00000401605 FBXO41Q8TF61 875 aa8.82□□□□□ -1
CLIP4-202ENST00000401605 CNTLNQ9NXG0 1405 aa8.82□□□□□ -1
CLIP4-202ENST00000401605 SYCP2Q9BX26 1530 aa8.82□□□□□ -1
CLIP4-202ENST00000401605 C1orf115Q9H7X2 142 aa8.82□□□□□ -1
CLIP4-202ENST00000401605 EHBP1L1Q8N3D4 1523 aa8.82□□□□□ -1
CLIP4-202ENST00000401605 SAMD9LQ8IVG5 1584 aa8.81□□□□□ -1
CLIP4-202ENST00000401605 ABCA6Q8N139 1617 aa8.81□□□□□ -1
CLIP4-202ENST00000401605 UHRF1BP1Q6BDS2 1440 aa8.81□□□□□ -1
CLIP4-202ENST00000401605 ZNF644Q9H582 1327 aaPredicted RBP8.81□□□□□ -1
CLIP4-202ENST00000401605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
CLIP4-202ENST00000401605 ZNF219Q9P2Y4 722 aaPredicted RBP8.81□□□□□ -1
CLIP4-202ENST00000401605 FGD1P98174 961 aa8.8□□□□□ -1
CLIP4-202ENST00000401605 DMRT2Q9Y5R5 561 aa8.8□□□□□ -1
CLIP4-202ENST00000401605 ITSN2Q9NZM3 1697 aa8.8□□□□□ -1
CLIP4-202ENST00000401605 NKX1-1Q15270 411 aaPredicted RBP8.79□□□□□ -1
CLIP4-202ENST00000401605 RSPH4AQ5TD94 716 aa8.79□□□□□ -1
CLIP4-202ENST00000401605 ZMYND15Q9H091 742 aa8.79□□□□□ -1
CLIP4-202ENST00000401605 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
CLIP4-202ENST00000401605 A2MP01023 1474 aa8.79□□□□□ -1
CLIP4-202ENST00000401605 MBD5Q9P267 1494 aa8.79□□□□□ -1
CLIP4-202ENST00000401605 FER1L4A9Z1Z3 1794 aa8.79□□□□□ -1
CLIP4-202ENST00000401605 VPS8Q8N3P4 1428 aa8.79□□□□□ -1
CLIP4-202ENST00000401605 CDC42BPAQ5VT25 1732 aa8.79□□□□□ -1
CLIP4-202ENST00000401605 ATP7AQ04656 1500 aa8.78□□□□□ -1
CLIP4-202ENST00000401605 RTEL1-TNFRSF6BF6WH68 1400 aa8.78□□□□□ -1
CLIP4-202ENST00000401605 ZMYM3Q14202 1370 aa8.78□□□□□ -1
CLIP4-202ENST00000401605 KIDINS220Q9ULH0 1771 aa8.78□□□□□ -1
CLIP4-202ENST00000401605 NCOA2Q15596 1464 aa8.77□□□□□ -1
CLIP4-202ENST00000401605 GGT6Q6P531 493 aa8.77□□□□□ -1
CLIP4-202ENST00000401605 TIAM1Q13009 1591 aa8.77□□□□□ -1.01
CLIP4-202ENST00000401605 HS6ST3Q8IZP7 471 aa8.77□□□□□ -1.01
CLIP4-202ENST00000401605 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
CLIP4-202ENST00000401605 RSPH6AQ9H0K4 717 aa8.77□□□□□ -1.01
CLIP4-202ENST00000401605 BRD2P25440 801 aaKnown RBP8.76□□□□□ -1.01
CLIP4-202ENST00000401605 NPATQ14207 1427 aa8.76□□□□□ -1.01
CLIP4-202ENST00000401605 DHX29Q7Z478 1369 aaKnown RBP8.76□□□□□ -1.01
CLIP4-202ENST00000401605 TSPY4P0CV99 314 aa8.75□□□□□ -1.01
CLIP4-202ENST00000401605 TSPY10P0CW01 314 aa8.75□□□□□ -1.01
CLIP4-202ENST00000401605 CERKQ8TCT0 537 aa8.75□□□□□ -1.01
CLIP4-202ENST00000401605 INO80Q9ULG1 1556 aaPredicted RBP8.75□□□□□ -1.01
CLIP4-202ENST00000401605 CCDC141Q6ZP82 1450 aa8.75□□□□□ -1.01
CLIP4-202ENST00000401605 LRRC9Q6ZRR7 1453 aa8.75□□□□□ -1.01
CLIP4-202ENST00000401605 PLXNC1O60486 1568 aa8.75□□□□□ -1.01
CLIP4-202ENST00000401605 ZEB1P37275 1124 aaPredicted RBP8.74□□□□□ -1.01
CLIP4-202ENST00000401605 SAMD1Q6SPF0 538 aaPredicted RBP8.74□□□□□ -1.01
CLIP4-202ENST00000401605 CAMSAP2Q08AD1 1489 aa8.74□□□□□ -1.01
CLIP4-202ENST00000401605 CHMP4AQ9BY43 222 aa8.74□□□□□ -1.01
CLIP4-202ENST00000401605 BCL11BQ9C0K0 894 aaPredicted RBP8.74□□□□□ -1.01
CLIP4-202ENST00000401605 PREX1Q8TCU6 1659 aa8.73□□□□□ -1.01
CLIP4-202ENST00000401605 KIF3BO15066 747 aa8.73□□□□□ -1.01
CLIP4-202ENST00000401605 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
CLIP4-202ENST00000401605 NEUROD1Q13562 356 aa8.73□□□□□ -1.01
CLIP4-202ENST00000401605 KANK4Q5T7N3 995 aaPredicted RBP8.73□□□□□ -1.01
CLIP4-202ENST00000401605 PTPRTO14522 1441 aa8.72□□□□□ -1.01
CLIP4-202ENST00000401605 MAP3K1Q13233 1512 aa8.72□□□□□ -1.01
CLIP4-202ENST00000401605 SLC24A3Q9HC58 644 aa8.72□□□□□ -1.01
CLIP4-202ENST00000401605 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
CLIP4-202ENST00000401605 CLSPNQ9HAW4 1339 aa8.72□□□□□ -1.01
CLIP4-202ENST00000401605 PTPRKQ15262 1439 aa8.71□□□□□ -1.01
CLIP4-202ENST00000401605 NCOA1Q15788 1441 aa8.71□□□□□ -1.01
CLIP4-202ENST00000401605 ZBTB7CA1YPR0 619 aa8.71□□□□□ -1.01
CLIP4-202ENST00000401605 SUPT6HQ7KZ85 1726 aaKnown RBP8.71□□□□□ -1.02
CLIP4-202ENST00000401605 C3P01024 1663 aa8.71□□□□□ -1.02
CLIP4-202ENST00000401605 MIA2Q96PC5 1412 aa8.7□□□□□ -1.02
CLIP4-202ENST00000401605 WASHC2CQ9Y4E1 1318 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms