RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
BRCC3-205ENST00000399026 MAGI2Q86UL8 1455 aa13.05□□□□□ -0.32
BRCC3-205ENST00000399026 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
BRCC3-205ENST00000399026 EVX2Q03828 476 aa13.05□□□□□ -0.32
BRCC3-205ENST00000399026 CROCC2H7BZ55 1655 aa13.05□□□□□ -0.32
BRCC3-205ENST00000399026 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
BRCC3-205ENST00000399026 AFAP1Q8N556 730 aa13.04□□□□□ -0.32
BRCC3-205ENST00000399026 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
BRCC3-205ENST00000399026 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
BRCC3-205ENST00000399026 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
BRCC3-205ENST00000399026 HNRNPMP52272 730 aaKnown RBP eCLIP13.03□□□□□ -0.32
BRCC3-205ENST00000399026 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
BRCC3-205ENST00000399026 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.32
BRCC3-205ENST00000399026 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.32
BRCC3-205ENST00000399026 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
BRCC3-205ENST00000399026 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
BRCC3-205ENST00000399026 FGD6Q6ZV73 1430 aa13.02□□□□□ -0.33
BRCC3-205ENST00000399026 MIA2Q96PC5 1412 aa13.02□□□□□ -0.33
BRCC3-205ENST00000399026 MLH3Q9UHC1 1453 aa13.02□□□□□ -0.33
BRCC3-205ENST00000399026 MYT1LQ9UL68 1186 aa13.01□□□□□ -0.33
BRCC3-205ENST00000399026 MADDQ8WXG6 1647 aa13□□□□□ -0.33
BRCC3-205ENST00000399026 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
BRCC3-205ENST00000399026 REREQ9P2R6 1566 aa12.99□□□□□ -0.33
BRCC3-205ENST00000399026 ATP10AO60312 1499 aa12.99□□□□□ -0.33
BRCC3-205ENST00000399026 ADAMTSL3P82987 1691 aa12.99□□□□□ -0.33
BRCC3-205ENST00000399026 TCOF1Q13428 1488 aaKnown RBP12.98□□□□□ -0.33
BRCC3-205ENST00000399026 PLXNC1O60486 1568 aa12.98□□□□□ -0.33
BRCC3-205ENST00000399026 FER1L4A9Z1Z3 1794 aa12.97□□□□□ -0.33
BRCC3-205ENST00000399026 SPAG9O60271 1321 aaKnown RBP12.97□□□□□ -0.33
BRCC3-205ENST00000399026 RIMS1Q86UR5 1692 aaKnown RBP12.97□□□□□ -0.33
BRCC3-205ENST00000399026 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
BRCC3-205ENST00000399026 MAST1Q9Y2H9 1570 aa12.97□□□□□ -0.33
BRCC3-205ENST00000399026 ARID4BQ4LE39 1312 aaPredicted RBP12.96□□□□□ -0.33
BRCC3-205ENST00000399026 SHANK2Q9UPX8 1470 aa12.94□□□□□ -0.34
BRCC3-205ENST00000399026 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
BRCC3-205ENST00000399026 DAPK1P53355 1430 aa12.94□□□□□ -0.34
BRCC3-205ENST00000399026 A2MP01023 1474 aa12.92□□□□□ -0.34
BRCC3-205ENST00000399026 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
BRCC3-205ENST00000399026 ABCC5O15440 1437 aa12.92□□□□□ -0.34
BRCC3-205ENST00000399026 AGLP35573 1532 aa12.92□□□□□ -0.34
BRCC3-205ENST00000399026 MLECQ14165 292 aa12.91□□□□□ -0.34
BRCC3-205ENST00000399026 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
BRCC3-205ENST00000399026 PROM2Q8N271 834 aa12.88□□□□□ -0.35
BRCC3-205ENST00000399026 CLTCQ00610 1675 aaKnown RBP12.87□□□□□ -0.35
BRCC3-205ENST00000399026 PTPRMP28827 1452 aa12.87□□□□□ -0.35
BRCC3-205ENST00000399026 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
BRCC3-205ENST00000399026 EIF2AK4Q9P2K8 1649 aaKnown RBP12.87□□□□□ -0.35
BRCC3-205ENST00000399026 TSPY4P0CV99 314 aa12.86□□□□□ -0.35
BRCC3-205ENST00000399026 TSPY10P0CW01 314 aa12.86□□□□□ -0.35
BRCC3-205ENST00000399026 RSPH4AQ5TD94 716 aa12.86□□□□□ -0.35
BRCC3-205ENST00000399026 RNF17Q9BXT8 1623 aaKnown RBP12.85□□□□□ -0.35
BRCC3-205ENST00000399026 DUOX2Q9NRD8 1548 aa12.85□□□□□ -0.35
BRCC3-205ENST00000399026 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
BRCC3-205ENST00000399026 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
BRCC3-205ENST00000399026 ADGRL2O95490 1459 aa12.85□□□□□ -0.35
BRCC3-205ENST00000399026 DHX29Q7Z478 1369 aaKnown RBP12.84□□□□□ -0.35
BRCC3-205ENST00000399026 KIF15Q9NS87 1388 aa12.84□□□□□ -0.35
BRCC3-205ENST00000399026 C3P01024 1663 aa12.84□□□□□ -0.35
BRCC3-205ENST00000399026 CHIC2Q9UKJ5 165 aa12.84□□□□□ -0.35
BRCC3-205ENST00000399026 PTPRKQ15262 1439 aa12.84□□□□□ -0.35
BRCC3-205ENST00000399026 MROH1Q8NDA8 1641 aa12.84□□□□□ -0.35
BRCC3-205ENST00000399026 MROH2AA6NES4 1674 aa12.83□□□□□ -0.35
BRCC3-205ENST00000399026 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
BRCC3-205ENST00000399026 CEP152O94986 1710 aa12.82□□□□□ -0.36
BRCC3-205ENST00000399026 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
BRCC3-205ENST00000399026 DEPDC5O75140 1603 aa12.8□□□□□ -0.36
BRCC3-205ENST00000399026 ERBINQ96RT1 1412 aa12.8□□□□□ -0.36
BRCC3-205ENST00000399026 KDM5DQ9BY66 1539 aa12.8□□□□□ -0.36
BRCC3-205ENST00000399026 ITGAEP38570 1179 aa12.8□□□□□ -0.36
BRCC3-205ENST00000399026 ZC3H13Q5T200 1668 aaKnown RBP12.8□□□□□ -0.36
BRCC3-205ENST00000399026 PRDM15P57071 1507 aaPredicted RBP12.79□□□□□ -0.36
BRCC3-205ENST00000399026 RRP7BPQ9NSQ0 103 aa12.79□□□□□ -0.36
BRCC3-205ENST00000399026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
BRCC3-205ENST00000399026 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
BRCC3-205ENST00000399026 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
BRCC3-205ENST00000399026 KIF3BO15066 747 aa12.78□□□□□ -0.36
BRCC3-205ENST00000399026 GGT6Q6P531 493 aa12.78□□□□□ -0.36
BRCC3-205ENST00000399026 CNTLNQ9NXG0 1405 aa12.77□□□□□ -0.37
BRCC3-205ENST00000399026 ABCC3O15438 1527 aa12.77□□□□□ -0.37
BRCC3-205ENST00000399026 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.37
BRCC3-205ENST00000399026 CAMSAP1Q5T5Y3 1602 aa12.77□□□□□ -0.37
BRCC3-205ENST00000399026 PREX1Q8TCU6 1659 aa12.77□□□□□ -0.37
BRCC3-205ENST00000399026 UNC13BO14795 1591 aa12.75□□□□□ -0.37
BRCC3-205ENST00000399026 CEBPAP49715 358 aaPredicted RBP12.75□□□□□ -0.37
BRCC3-205ENST00000399026 ESF1Q9H501 851 aaKnown RBP12.75□□□□□ -0.37
BRCC3-205ENST00000399026 MYO3AQ8NEV4 1616 aa12.74□□□□□ -0.37
BRCC3-205ENST00000399026 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
BRCC3-205ENST00000399026 ANKRD50Q9ULJ7 1429 aa12.73□□□□□ -0.37
BRCC3-205ENST00000399026 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
BRCC3-205ENST00000399026 VWDEQ8N2E2 1590 aa12.72□□□□□ -0.37
BRCC3-205ENST00000399026 FKBP8Q14318 412 aa12.71□□□□□ -0.37
BRCC3-205ENST00000399026 ZMYM3Q14202 1370 aa12.7□□□□□ -0.38
BRCC3-205ENST00000399026 GABBR2O75899 941 aa12.7□□□□□ -0.38
BRCC3-205ENST00000399026 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
BRCC3-205ENST00000399026 PZPP20742 1482 aa12.7□□□□□ -0.38
BRCC3-205ENST00000399026 ZNF142P52746 1687 aaPredicted RBP12.7□□□□□ -0.38
BRCC3-205ENST00000399026 WASHC2CQ9Y4E1 1318 aa12.69□□□□□ -0.38
BRCC3-205ENST00000399026 EFCAB6Q5THR3 1501 aa12.68□□□□□ -0.38
BRCC3-205ENST00000399026 IQGAP3Q86VI3 1631 aa12.68□□□□□ -0.38
BRCC3-205ENST00000399026 NAIPQ13075 1403 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms