RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 BCL11AQ9H165 835 aa26.28■■□□□ 1.8
COL13A1-205ENST00000398978 MYBBP1AQ9BQG0 1328 aaKnown RBP26.27■■□□□ 1.8
COL13A1-205ENST00000398978 PTPRGP23470 1445 aa26.26■■□□□ 1.79
COL13A1-205ENST00000398978 SHANK2Q9UPX8 1470 aa26.24■■□□□ 1.79
COL13A1-205ENST00000398978 PAK3O75914 559 aaPredicted RBP26.24■■□□□ 1.79
COL13A1-205ENST00000398978 RNF123Q5XPI4 1314 aa26.24■■□□□ 1.79
COL13A1-205ENST00000398978 CCDC144AA2RUR9 1427 aa26.21■■□□□ 1.79
COL13A1-205ENST00000398978 EXOC6Q8TAG9 804 aa26.21■■□□□ 1.79
COL13A1-205ENST00000398978 CDCA7LQ96GN5 454 aa26.21■■□□□ 1.79
COL13A1-205ENST00000398978 FAM135AQ9P2D6 1515 aa26.21■■□□□ 1.79
COL13A1-205ENST00000398978 RALBP1Q15311 655 aa26.2■■□□□ 1.79
COL13A1-205ENST00000398978 ARHGEF12Q9NZN5 1544 aa26.2■■□□□ 1.78
COL13A1-205ENST00000398978 NBR1Q14596 966 aa26.19■■□□□ 1.78
COL13A1-205ENST00000398978 SAMD9LQ8IVG5 1584 aa26.19■■□□□ 1.78
COL13A1-205ENST00000398978 LRPPRCP42704 1394 aaKnown RBP26.18■■□□□ 1.78
COL13A1-205ENST00000398978 BRD4O60885 1362 aaPredicted RBP26.18■■□□□ 1.78
COL13A1-205ENST00000398978 CCDC141Q6ZP82 1450 aa26.17■■□□□ 1.78
COL13A1-205ENST00000398978 KDM5DQ9BY66 1539 aa26.15■■□□□ 1.78
COL13A1-205ENST00000398978 PRAG1Q86YV5 1406 aa26.15■■□□□ 1.78
COL13A1-205ENST00000398978 SYCP2Q9BX26 1530 aa26.15■■□□□ 1.78
COL13A1-205ENST00000398978 RRP1P56182 461 aaKnown RBP26.14■■□□□ 1.78
COL13A1-205ENST00000398978 CDC42BPBQ9Y5S2 1711 aa26.14■■□□□ 1.78
COL13A1-205ENST00000398978 KTN1Q86UP2 1357 aaKnown RBP26.14■■□□□ 1.78
COL13A1-205ENST00000398978 DISP3Q9P2K9 1392 aa26.14■■□□□ 1.78
COL13A1-205ENST00000398978 PLIN1O60240 522 aa26.13■■□□□ 1.77
COL13A1-205ENST00000398978 NLRP13Q86W25 1043 aa26.13■■□□□ 1.77
COL13A1-205ENST00000398978 PANK3Q9H999 370 aa26.13■■□□□ 1.77
COL13A1-205ENST00000398978 RCAN3Q9UKA8 241 aa26.13■■□□□ 1.77
COL13A1-205ENST00000398978 PLA2R1Q13018 1463 aa26.13■■□□□ 1.77
COL13A1-205ENST00000398978 NOP58Q9Y2X3 529 aaKnown RBP26.13■■□□□ 1.77
COL13A1-205ENST00000398978 PER1O15534 1290 aaPredicted RBP26.12■■□□□ 1.77
COL13A1-205ENST00000398978 ARHGAP5Q13017 1502 aa26.1■■□□□ 1.77
COL13A1-205ENST00000398978 PLEKHH2Q8IVE3 1493 aa26.1■■□□□ 1.77
COL13A1-205ENST00000398978 NPM2Q86SE8 214 aaKnown RBP26.1■■□□□ 1.77
COL13A1-205ENST00000398978 SKAP1Q86WV1 359 aa26.09■■□□□ 1.77
COL13A1-205ENST00000398978 ARHGEF5Q12774 1597 aa26.09■■□□□ 1.77
COL13A1-205ENST00000398978 A2MP01023 1474 aa26.09■■□□□ 1.77
COL13A1-205ENST00000398978 TESK2Q96S53 571 aa26.08■■□□□ 1.77
COL13A1-205ENST00000398978 PARD3Q8TEW0 1356 aa26.06■■□□□ 1.76
COL13A1-205ENST00000398978 TTC37Q6PGP7 1564 aa26.05■■□□□ 1.76
COL13A1-205ENST00000398978 TRPM1Q7Z4N2 1603 aa26.05■■□□□ 1.76
COL13A1-205ENST00000398978 E9PCH4 1651 aa26.04■■□□□ 1.76
COL13A1-205ENST00000398978 PREX2Q70Z35 1606 aa26.03■■□□□ 1.76
COL13A1-205ENST00000398978 ANP32AP39687 249 aaKnown RBP26.02■■□□□ 1.76
COL13A1-205ENST00000398978 RSPH4AQ5TD94 716 aa26.01■■□□□ 1.75
COL13A1-205ENST00000398978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.98■■□□□ 1.75
COL13A1-205ENST00000398978 ERCC6L2Q5T890 1561 aa25.98■■□□□ 1.75
COL13A1-205ENST00000398978 ERBINQ96RT1 1412 aa25.97■■□□□ 1.75
COL13A1-205ENST00000398978 TMF1P82094 1093 aa25.97■■□□□ 1.75
COL13A1-205ENST00000398978 IPO9Q96P70 1041 aaKnown RBP25.96■■□□□ 1.75
COL13A1-205ENST00000398978 COL17A1Q9UMD9 1497 aaPredicted RBP25.96■■□□□ 1.75
COL13A1-205ENST00000398978 DEKP35659 375 aaKnown RBP25.95■■□□□ 1.75
COL13A1-205ENST00000398978 ADAMTS8Q9UP79 889 aa25.94■■□□□ 1.74
COL13A1-205ENST00000398978 ZBTB47Q9UFB7 747 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-205ENST00000398978 GPRASP1Q5JY77 1395 aa25.93■■□□□ 1.74
COL13A1-205ENST00000398978 CRBNQ96SW2 442 aa25.92■■□□□ 1.74
COL13A1-205ENST00000398978 C20orf194Q5TEA3 1177 aa25.91■■□□□ 1.74
COL13A1-205ENST00000398978 AFAP1Q8N556 730 aa25.9■■□□□ 1.74
COL13A1-205ENST00000398978 MYO5CQ9NQX4 1742 aa25.9■■□□□ 1.74
COL13A1-205ENST00000398978 PDE3BQ13370 1112 aa25.88■■□□□ 1.73
COL13A1-205ENST00000398978 UNC13BO14795 1591 aa25.88■■□□□ 1.73
COL13A1-205ENST00000398978 CHD1O14646 1710 aa25.88■■□□□ 1.73
COL13A1-205ENST00000398978 PRDM15P57071 1507 aaPredicted RBP25.87■■□□□ 1.73
COL13A1-205ENST00000398978 PDE4AP27815 886 aa25.86■■□□□ 1.73
COL13A1-205ENST00000398978 MYT1LQ9UL68 1186 aa25.85■■□□□ 1.73
COL13A1-205ENST00000398978 KNSTRNQ9Y448 316 aa25.85■■□□□ 1.73
COL13A1-205ENST00000398978 TRAPPC8Q9Y2L5 1435 aa25.85■■□□□ 1.73
COL13A1-205ENST00000398978 EFCAB2Q5VUJ9 269 aa25.82■■□□□ 1.72
COL13A1-205ENST00000398978 MAGI2Q86UL8 1455 aa25.82■■□□□ 1.72
COL13A1-205ENST00000398978 CCDC146Q8IYE0 955 aa25.82■■□□□ 1.72
COL13A1-205ENST00000398978 IQGAP3Q86VI3 1631 aa25.82■■□□□ 1.72
COL13A1-205ENST00000398978 PPP2R1AP30153 589 aa25.82■■□□□ 1.72
COL13A1-205ENST00000398978 LAS1LQ9Y4W2 734 aaKnown RBP25.8■■□□□ 1.72
COL13A1-205ENST00000398978 TCERG1O14776 1098 aaKnown RBP25.8■■□□□ 1.72
COL13A1-205ENST00000398978 WDR43Q15061 677 aaKnown RBP eCLIP25.79■■□□□ 1.72
COL13A1-205ENST00000398978 BLMP54132 1417 aaPredicted RBP25.79■■□□□ 1.72
COL13A1-205ENST00000398978 MAST1Q9Y2H9 1570 aa25.79■■□□□ 1.72
COL13A1-205ENST00000398978 DUOX2Q9NRD8 1548 aa25.78■■□□□ 1.72
COL13A1-205ENST00000398978 PLEKHH1Q9ULM0 1364 aa25.78■■□□□ 1.72
COL13A1-205ENST00000398978 WASHC2CQ9Y4E1 1318 aa25.77■■□□□ 1.72
COL13A1-205ENST00000398978 SPAG9O60271 1321 aaKnown RBP25.77■■□□□ 1.72
COL13A1-205ENST00000398978 BACH2Q9BYV9 841 aa25.76■■□□□ 1.71
COL13A1-205ENST00000398978 ABCC2Q92887 1545 aa25.75■■□□□ 1.71
COL13A1-205ENST00000398978 AMER1Q5JTC6 1135 aaPredicted RBP25.75■■□□□ 1.71
COL13A1-205ENST00000398978 PLXNC1O60486 1568 aa25.74■■□□□ 1.71
COL13A1-205ENST00000398978 WDR7Q9Y4E6 1490 aa25.74■■□□□ 1.71
COL13A1-205ENST00000398978 PLCH2O75038 1416 aa25.74■■□□□ 1.71
COL13A1-205ENST00000398978 EIF2AK4Q9P2K8 1649 aaKnown RBP25.72■■□□□ 1.71
COL13A1-205ENST00000398978 RTL5Q5HYW3 569 aaPredicted RBP25.7■■□□□ 1.71
COL13A1-205ENST00000398978 DUSP27Q5VZP5 1158 aa25.69■■□□□ 1.7
COL13A1-205ENST00000398978 CFAP70Q5T0N1 1121 aa25.69■■□□□ 1.7
COL13A1-205ENST00000398978 KIF3BO15066 747 aa25.69■■□□□ 1.7
COL13A1-205ENST00000398978 LAMC1P11047 1609 aa25.68■■□□□ 1.7
COL13A1-205ENST00000398978 ZMYM4Q5VZL5 1548 aa25.68■■□□□ 1.7
COL13A1-205ENST00000398978 SPINK5Q9NQ38 1064 aaPredicted RBP25.68■■□□□ 1.7
COL13A1-205ENST00000398978 ATP10AO60312 1499 aa25.67■■□□□ 1.7
COL13A1-205ENST00000398978 PRKCSHP14314 528 aaPredicted RBP25.66■■□□□ 1.7
COL13A1-205ENST00000398978 APAF1O14727 1248 aa25.65■■□□□ 1.7
COL13A1-205ENST00000398978 SLC4A3P48751 1232 aa25.65■■□□□ 1.7
COL13A1-205ENST00000398978 GOLGA2Q08379 1002 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms