RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 CC2D1BQ5T0F9 858 aaKnown RBP13.44□□□□□ -0.26
USP19-204ENST00000398896 KDM2AQ9Y2K7 1162 aa13.44□□□□□ -0.26
USP19-204ENST00000398896 MAP3K1Q13233 1512 aa13.44□□□□□ -0.26
USP19-204ENST00000398896 C20orf194Q5TEA3 1177 aa13.44□□□□□ -0.26
USP19-204ENST00000398896 FSD2A1L4K1 749 aa13.44□□□□□ -0.26
USP19-204ENST00000398896 OFD1O75665 1012 aa13.44□□□□□ -0.26
USP19-204ENST00000398896 NBPF8Q3BBV2 869 aa13.43□□□□□ -0.26
USP19-204ENST00000398896 ZBTB7CA1YPR0 619 aa13.43□□□□□ -0.26
USP19-204ENST00000398896 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
USP19-204ENST00000398896 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
USP19-204ENST00000398896 ERICH3Q5RHP9 1530 aa13.42□□□□□ -0.26
USP19-204ENST00000398896 MFAP1P55081 439 aaKnown RBP13.42□□□□□ -0.26
USP19-204ENST00000398896 TBC1D2Q9BYX2 928 aa13.41□□□□□ -0.26
USP19-204ENST00000398896 ERBB4Q15303 1308 aa13.41□□□□□ -0.26
USP19-204ENST00000398896 DDX49Q9Y6V7 483 aaKnown RBP13.41□□□□□ -0.26
USP19-204ENST00000398896 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
USP19-204ENST00000398896 ZNF771Q7L3S4 317 aaPredicted RBP13.4□□□□□ -0.26
USP19-204ENST00000398896 PRXQ9BXM0 1461 aa13.4□□□□□ -0.26
USP19-204ENST00000398896 DMTNQ08495 405 aa13.39□□□□□ -0.27
USP19-204ENST00000398896 USP47Q96K76 1375 aa13.39□□□□□ -0.27
USP19-204ENST00000398896 TERF1P54274 439 aa13.39□□□□□ -0.27
USP19-204ENST00000398896 CBX1P83916 185 aa13.39□□□□□ -0.27
USP19-204ENST00000398896 UTP14CQ5TAP6 766 aaKnown RBP13.39□□□□□ -0.27
USP19-204ENST00000398896 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
USP19-204ENST00000398896 DYNC1I1O14576 645 aa13.38□□□□□ -0.27
USP19-204ENST00000398896 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
USP19-204ENST00000398896 KIF20AO95235 890 aa13.38□□□□□ -0.27
USP19-204ENST00000398896 HFM1A2PYH4 1435 aa13.38□□□□□ -0.27
USP19-204ENST00000398896 CGNQ9P2M7 1197 aaKnown RBP13.37□□□□□ -0.27
USP19-204ENST00000398896 LETM1O95202 739 aaPredicted RBP13.37□□□□□ -0.27
USP19-204ENST00000398896 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP19-204ENST00000398896 CCDC94Q9BW85 323 aaPredicted RBP13.37□□□□□ -0.27
USP19-204ENST00000398896 GTPBP4Q9BZE4 634 aaKnown RBP13.37□□□□□ -0.27
USP19-204ENST00000398896 RIPK4P57078 832 aa13.36□□□□□ -0.27
USP19-204ENST00000398896 C22orf23Q9BZE7 217 aa13.36□□□□□ -0.27
USP19-204ENST00000398896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.36□□□□□ -0.27
USP19-204ENST00000398896 TIAM1Q13009 1591 aa13.36□□□□□ -0.27
USP19-204ENST00000398896 KIAA2012Q0VF49 1180 aa13.36□□□□□ -0.27
USP19-204ENST00000398896 CGNL1Q0VF96 1302 aa13.36□□□□□ -0.27
USP19-204ENST00000398896 KDM2BQ8NHM5 1336 aa13.36□□□□□ -0.27
USP19-204ENST00000398896 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
USP19-204ENST00000398896 XPCQ01831 940 aaPredicted RBP13.35□□□□□ -0.27
USP19-204ENST00000398896 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
USP19-204ENST00000398896 CHAF1AQ13111 956 aaPredicted RBP13.34□□□□□ -0.27
USP19-204ENST00000398896 FTSJ3Q8IY81 847 aaKnown RBP13.33□□□□□ -0.27
USP19-204ENST00000398896 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.27
USP19-204ENST00000398896 ST20-MTHFSA0A0A6YYL1 179 aa13.33□□□□□ -0.28
USP19-204ENST00000398896 SEC24BO95487 1268 aa13.33□□□□□ -0.28
USP19-204ENST00000398896 SASS6Q6UVJ0 657 aa13.33□□□□□ -0.28
USP19-204ENST00000398896 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
USP19-204ENST00000398896 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
USP19-204ENST00000398896 E9PSI1 815 aa13.32□□□□□ -0.28
USP19-204ENST00000398896 TBC1D32Q96NH3 1257 aa13.32□□□□□ -0.28
USP19-204ENST00000398896 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
USP19-204ENST00000398896 CLUAP1Q96AJ1 413 aa13.31□□□□□ -0.28
USP19-204ENST00000398896 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
USP19-204ENST00000398896 NAIPQ13075 1403 aa13.3□□□□□ -0.28
USP19-204ENST00000398896 ANTXR1Q9H6X2 564 aa13.3□□□□□ -0.28
USP19-204ENST00000398896 CCDC39Q9UFE4 941 aa13.3□□□□□ -0.28
USP19-204ENST00000398896 HMGN5P82970 282 aaKnown RBP13.3□□□□□ -0.28
USP19-204ENST00000398896 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
USP19-204ENST00000398896 KNSTRNQ9Y448 316 aa13.29□□□□□ -0.28
USP19-204ENST00000398896 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
USP19-204ENST00000398896 EIF3AQ14152 1382 aaKnown RBP13.28□□□□□ -0.28
USP19-204ENST00000398896 IRX3P78415 501 aaPredicted RBP13.28□□□□□ -0.28
USP19-204ENST00000398896 TNNT3P45378 269 aaPredicted RBP13.27□□□□□ -0.28
USP19-204ENST00000398896 LRPPRCP42704 1394 aaKnown RBP13.27□□□□□ -0.28
USP19-204ENST00000398896 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
USP19-204ENST00000398896 CIZ1Q9ULV3 898 aaPredicted RBP13.27□□□□□ -0.29
USP19-204ENST00000398896 MIA2Q96PC5 1412 aa13.27□□□□□ -0.29
USP19-204ENST00000398896 ARID3CA6NKF2 412 aa13.27□□□□□ -0.29
USP19-204ENST00000398896 TNPO1Q92973 898 aaKnown RBP13.26□□□□□ -0.29
USP19-204ENST00000398896 ADAMTS8Q9UP79 889 aa13.26□□□□□ -0.29
USP19-204ENST00000398896 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
USP19-204ENST00000398896 IGHDP01880 384 aa13.25□□□□□ -0.29
USP19-204ENST00000398896 IGSF3O75054 1194 aa13.25□□□□□ -0.29
USP19-204ENST00000398896 ZNF830Q96NB3 372 aaPredicted RBP13.25□□□□□ -0.29
USP19-204ENST00000398896 MCM5P33992 734 aa13.25□□□□□ -0.29
USP19-204ENST00000398896 KCNJ4P48050 445 aa13.25□□□□□ -0.29
USP19-204ENST00000398896 CAVIN1Q6NZI2 390 aaKnown RBP13.24□□□□□ -0.29
USP19-204ENST00000398896 TMEM51Q9NW97 253 aa13.24□□□□□ -0.29
USP19-204ENST00000398896 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
USP19-204ENST00000398896 CCDC66A2RUB6 948 aa13.24□□□□□ -0.29
USP19-204ENST00000398896 ZSCAN20P17040 1043 aaPredicted RBP13.24□□□□□ -0.29
USP19-204ENST00000398896 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
USP19-204ENST00000398896 PANK1Q8TE04 598 aa13.24□□□□□ -0.29
USP19-204ENST00000398896 BCAR3O75815 825 aa13.24□□□□□ -0.29
USP19-204ENST00000398896 PLCB2Q00722 1185 aa13.24□□□□□ -0.29
USP19-204ENST00000398896 GAS2L3Q86XJ1 694 aa13.24□□□□□ -0.29
USP19-204ENST00000398896 FHOD3Q2V2M9 1422 aa13.24□□□□□ -0.29
USP19-204ENST00000398896 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
USP19-204ENST00000398896 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
USP19-204ENST00000398896 PPP1R9BQ96SB3 815 aa13.23□□□□□ -0.29
USP19-204ENST00000398896 APPP05067 770 aa13.23□□□□□ -0.29
USP19-204ENST00000398896 ZFP91Q96JP5 570 aaPredicted RBP13.23□□□□□ -0.29
USP19-204ENST00000398896 NOL7Q9UMY1 257 aaKnown RBP13.22□□□□□ -0.29
USP19-204ENST00000398896 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
USP19-204ENST00000398896 MCTP1Q6DN14 999 aa13.22□□□□□ -0.29
USP19-204ENST00000398896 CCDC146Q8IYE0 955 aa13.22□□□□□ -0.29
USP19-204ENST00000398896 KIF3AQ9Y496 699 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms