RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 C11orf95C9JLR9 678 aaPredicted RBP21.44■■□□□ 1.02
MBD1-209ENST00000398495 CCDC7Q96M83 1385 aa21.43■■□□□ 1.02
MBD1-209ENST00000398495 KDM5CP41229 1560 aa21.43■■□□□ 1.02
MBD1-209ENST00000398495 CCDC144AA2RUR9 1427 aa21.42■■□□□ 1.02
MBD1-209ENST00000398495 SCAPERQ9BY12 1400 aa21.42■■□□□ 1.02
MBD1-209ENST00000398495 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
MBD1-209ENST00000398495 DEPDC5O75140 1603 aa21.41■■□□□ 1.02
MBD1-209ENST00000398495 CNTLNQ9NXG0 1405 aa21.4■■□□□ 1.02
MBD1-209ENST00000398495 CCER2I3L3R5 266 aa21.39■■□□□ 1.01
MBD1-209ENST00000398495 USP47Q96K76 1375 aa21.38■■□□□ 1.01
MBD1-209ENST00000398495 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
MBD1-209ENST00000398495 E9PCH4 1651 aa21.37■■□□□ 1.01
MBD1-209ENST00000398495 ATP10AO60312 1499 aa21.36■■□□□ 1.01
MBD1-209ENST00000398495 CFAP74Q9C0B2 1584 aa21.36■■□□□ 1.01
MBD1-209ENST00000398495 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
MBD1-209ENST00000398495 KDM2AQ9Y2K7 1162 aa21.36■■□□□ 1.01
MBD1-209ENST00000398495 KIF7Q2M1P5 1343 aa21.35■■□□□ 1.01
MBD1-209ENST00000398495 KIDINS220Q9ULH0 1771 aa21.34■■□□□ 1.01
MBD1-209ENST00000398495 EIF2AK4Q9P2K8 1649 aaKnown RBP21.34■■□□□ 1.01
MBD1-209ENST00000398495 A2MP01023 1474 aa21.33■■□□□ 1.01
MBD1-209ENST00000398495 TRPM1Q7Z4N2 1603 aa21.33■■□□□ 1
MBD1-209ENST00000398495 CD109Q6YHK3 1445 aa21.33■■□□□ 1
MBD1-209ENST00000398495 VWDEQ8N2E2 1590 aa21.32■■□□□ 1
MBD1-209ENST00000398495 TET3O43151 1660 aa21.31■■□□□ 1
MBD1-209ENST00000398495 PRAG1Q86YV5 1406 aa21.31■■□□□ 1
MBD1-209ENST00000398495 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
MBD1-209ENST00000398495 ZNF518AQ6AHZ1 1483 aa21.3■■□□□ 1
MBD1-209ENST00000398495 SPHKAPQ2M3C7 1700 aa21.29■■□□□ 1
MBD1-209ENST00000398495 MYT1LQ9UL68 1186 aa21.29■■□□□ 1
MBD1-209ENST00000398495 PRDM15P57071 1507 aaPredicted RBP21.29■■□□□ 1
MBD1-209ENST00000398495 DHX29Q7Z478 1369 aaKnown RBP21.28■■□□□ 1
MBD1-209ENST00000398495 CARD11Q9BXL7 1154 aa21.28■■□□□ 1
MBD1-209ENST00000398495 TRPM2O94759 1503 aa21.28■■□□□ 1
MBD1-209ENST00000398495 RGL3Q3MIN7 710 aa21.27■■□□□ 1
MBD1-209ENST00000398495 POGZQ7Z3K3 1410 aa21.27■■□□□ 1
MBD1-209ENST00000398495 CLTCL1P53675 1640 aa21.24■□□□□ 0.99
MBD1-209ENST00000398495 CEP152O94986 1710 aa21.24■□□□□ 0.99
MBD1-209ENST00000398495 ROCK2O75116 1388 aaKnown RBP21.24■□□□□ 0.99
MBD1-209ENST00000398495 KIF3BO15066 747 aa21.23■□□□□ 0.99
MBD1-209ENST00000398495 KANK1Q14678 1352 aa21.23■□□□□ 0.99
MBD1-209ENST00000398495 PTPRTO14522 1441 aa21.23■□□□□ 0.99
MBD1-209ENST00000398495 HECW2Q9P2P5 1572 aa21.22■□□□□ 0.99
MBD1-209ENST00000398495 LAMC1P11047 1609 aa21.22■□□□□ 0.99
MBD1-209ENST00000398495 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
MBD1-209ENST00000398495 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
MBD1-209ENST00000398495 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
MBD1-209ENST00000398495 RNF17Q9BXT8 1623 aaKnown RBP21.2■□□□□ 0.98
MBD1-209ENST00000398495 FRMPD1Q5SYB0 1578 aa21.2■□□□□ 0.98
MBD1-209ENST00000398495 NEO1Q92859 1461 aa21.19■□□□□ 0.98
MBD1-209ENST00000398495 MLH3Q9UHC1 1453 aa21.19■□□□□ 0.98
MBD1-209ENST00000398495 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
MBD1-209ENST00000398495 MAP3K4Q9Y6R4 1608 aa21.18■□□□□ 0.98
MBD1-209ENST00000398495 GPRASP1Q5JY77 1395 aa21.18■□□□□ 0.98
MBD1-209ENST00000398495 PPRC1Q5VV67 1664 aaKnown RBP21.17■□□□□ 0.98
MBD1-209ENST00000398495 EFCAB6Q5THR3 1501 aa21.17■□□□□ 0.98
MBD1-209ENST00000398495 ARID4BQ4LE39 1312 aaPredicted RBP21.17■□□□□ 0.98
MBD1-209ENST00000398495 ST20-MTHFSA0A0A6YYL1 179 aa21.17■□□□□ 0.98
MBD1-209ENST00000398495 MADDQ8WXG6 1647 aa21.16■□□□□ 0.98
MBD1-209ENST00000398495 NBPF1Q3BBV0 1214 aa21.16■□□□□ 0.98
MBD1-209ENST00000398495 POLR3GLQ9BT43 218 aa21.16■□□□□ 0.98
MBD1-209ENST00000398495 PRKRIP1Q9H875 184 aaPredicted RBP21.16■□□□□ 0.98
MBD1-209ENST00000398495 CYB5RLQ6IPT4 315 aa21.14■□□□□ 0.97
MBD1-209ENST00000398495 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.97
MBD1-209ENST00000398495 UGGT1Q9NYU2 1555 aa21.12■□□□□ 0.97
MBD1-209ENST00000398495 RICTORQ6R327 1708 aa21.11■□□□□ 0.97
MBD1-209ENST00000398495 GLI2P10070 1586 aa21.11■□□□□ 0.97
MBD1-209ENST00000398495 CCDC184Q52MB2 194 aa21.11■□□□□ 0.97
MBD1-209ENST00000398495 DIP2CQ9Y2E4 1556 aa21.09■□□□□ 0.97
MBD1-209ENST00000398495 RAPGEF3O95398 923 aa21.08■□□□□ 0.97
MBD1-209ENST00000398495 NEURL4Q96JN8 1562 aa21.08■□□□□ 0.97
MBD1-209ENST00000398495 MROH2AA6NES4 1674 aa21.07■□□□□ 0.96
MBD1-209ENST00000398495 KIF1BO60333 1816 aa21.06■□□□□ 0.96
MBD1-209ENST00000398495 IQGAP1P46940 1657 aa21.06■□□□□ 0.96
MBD1-209ENST00000398495 DIP2BQ9P265 1576 aa21.05■□□□□ 0.96
MBD1-209ENST00000398495 COL17A1Q9UMD9 1497 aaPredicted RBP21.04■□□□□ 0.96
MBD1-209ENST00000398495 ABCC3O15438 1527 aa21.03■□□□□ 0.96
MBD1-209ENST00000398495 IFT172Q9UG01 1749 aa21.03■□□□□ 0.96
MBD1-209ENST00000398495 MRS2Q9HD23 443 aa21.02■□□□□ 0.95
MBD1-209ENST00000398495 CAMSAP1Q5T5Y3 1602 aa21.01■□□□□ 0.95
MBD1-209ENST00000398495 TESK2Q96S53 571 aa21■□□□□ 0.95
MBD1-209ENST00000398495 DISP3Q9P2K9 1392 aa21■□□□□ 0.95
MBD1-209ENST00000398495 NPATQ14207 1427 aa21■□□□□ 0.95
MBD1-209ENST00000398495 GGT6Q6P531 493 aa21■□□□□ 0.95
MBD1-209ENST00000398495 KIAA1210Q9ULL0 1709 aa20.99■□□□□ 0.95
MBD1-209ENST00000398495 HNRNPUQ00839 825 aaKnown RBP eCLIP20.99■□□□□ 0.95
MBD1-209ENST00000398495 CNGB1Q14028 1251 aaPredicted RBP20.99■□□□□ 0.95
MBD1-209ENST00000398495 MYOM2P54296 1465 aa20.98■□□□□ 0.95
MBD1-209ENST00000398495 ADGRB3O60242 1522 aa20.98■□□□□ 0.95
MBD1-209ENST00000398495 YEATS2Q9ULM3 1422 aa20.98■□□□□ 0.95
MBD1-209ENST00000398495 STAC3Q96MF2 364 aa20.97■□□□□ 0.95
MBD1-209ENST00000398495 SUPT16HQ9Y5B9 1047 aaKnown RBP20.97■□□□□ 0.95
MBD1-209ENST00000398495 CFAP65Q6ZU64 1925 aaKnown RBP20.97■□□□□ 0.95
MBD1-209ENST00000398495 SIGLEC1Q9BZZ2 1709 aa20.96■□□□□ 0.95
MBD1-209ENST00000398495 TSPOAP1O95153 1857 aa20.96■□□□□ 0.95
MBD1-209ENST00000398495 FAM69CQ0P6D2 419 aa20.95■□□□□ 0.94
MBD1-209ENST00000398495 FAM9BQ8IZU0 186 aa20.95■□□□□ 0.94
MBD1-209ENST00000398495 SCAF11Q99590 1463 aaKnown RBP20.94■□□□□ 0.94
MBD1-209ENST00000398495 ZMYM4Q5VZL5 1548 aa20.94■□□□□ 0.94
MBD1-209ENST00000398495 ZC3H13Q5T200 1668 aaKnown RBP20.92■□□□□ 0.94
MBD1-209ENST00000398495 WASHC2CQ9Y4E1 1318 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms