RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 CPS1P31327 1500 aa10.08□□□□□ -0.8
SMARCE1P6-201ENST00000398372 ZBTB22O15209 634 aa10.08□□□□□ -0.8
SMARCE1P6-201ENST00000398372 TROQ12816 1431 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1P6-201ENST00000398372 DNMT1P26358 1616 aaKnown RBP10.07□□□□□ -0.8
SMARCE1P6-201ENST00000398372 VWDEQ8N2E2 1590 aa10.07□□□□□ -0.8
SMARCE1P6-201ENST00000398372 ITSN2Q9NZM3 1697 aa10.06□□□□□ -0.8
SMARCE1P6-201ENST00000398372 STRCP1A6NGW2 1772 aa10.06□□□□□ -0.8
SMARCE1P6-201ENST00000398372 CCDC18Q5T9S5 1454 aa10.05□□□□□ -0.8
SMARCE1P6-201ENST00000398372 SETD1AO15047 1707 aaKnown RBP10.05□□□□□ -0.8
SMARCE1P6-201ENST00000398372 ABCC1P33527 1531 aa10.05□□□□□ -0.8
SMARCE1P6-201ENST00000398372 POLR1AO95602 1720 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1P6-201ENST00000398372 FYCO1Q9BQS8 1478 aa10.04□□□□□ -0.8
SMARCE1P6-201ENST00000398372 A2ML1A8K2U0 1454 aa10.04□□□□□ -0.8
SMARCE1P6-201ENST00000398372 SAMD9LQ8IVG5 1584 aa10.02□□□□□ -0.81
SMARCE1P6-201ENST00000398372 FBXO31Q5XUX0 539 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1P6-201ENST00000398372 GGT6Q6P531 493 aa10.02□□□□□ -0.81
SMARCE1P6-201ENST00000398372 CEP162Q5TB80 1403 aa10.01□□□□□ -0.81
SMARCE1P6-201ENST00000398372 LOC105371045A0A1W2PR82 267 aa10.01□□□□□ -0.81
SMARCE1P6-201ENST00000398372 POTEHQ6S545 545 aa10.01□□□□□ -0.81
SMARCE1P6-201ENST00000398372 RTN4Q9NQC3 1192 aaKnown RBP10.01□□□□□ -0.81
SMARCE1P6-201ENST00000398372 LRRC7Q96NW7 1537 aa10.01□□□□□ -0.81
SMARCE1P6-201ENST00000398372 PREX2Q70Z35 1606 aa10□□□□□ -0.81
SMARCE1P6-201ENST00000398372 HNRNPMP52272 730 aaKnown RBP eCLIP10□□□□□ -0.81
SMARCE1P6-201ENST00000398372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10□□□□□ -0.81
SMARCE1P6-201ENST00000398372 CDC42BPAQ5VT25 1732 aa9.99□□□□□ -0.81
SMARCE1P6-201ENST00000398372 PLXNC1O60486 1568 aa9.98□□□□□ -0.81
SMARCE1P6-201ENST00000398372 ANKLE2Q86XL3 938 aa9.98□□□□□ -0.81
SMARCE1P6-201ENST00000398372 SPAG9O60271 1321 aaKnown RBP9.98□□□□□ -0.81
SMARCE1P6-201ENST00000398372 NPHP4O75161 1426 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1P6-201ENST00000398372 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1P6-201ENST00000398372 A2MP01023 1474 aa9.97□□□□□ -0.81
SMARCE1P6-201ENST00000398372 RNF17Q9BXT8 1623 aaKnown RBP9.96□□□□□ -0.81
SMARCE1P6-201ENST00000398372 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMARCE1P6-201ENST00000398372 MTUS2Q5JR59 1369 aa9.96□□□□□ -0.82
SMARCE1P6-201ENST00000398372 TNRQ92752 1358 aa9.96□□□□□ -0.82
SMARCE1P6-201ENST00000398372 MED14O60244 1454 aa9.96□□□□□ -0.82
SMARCE1P6-201ENST00000398372 SYCP2Q9BX26 1530 aa9.96□□□□□ -0.82
SMARCE1P6-201ENST00000398372 XIRP1Q702N8 1843 aaKnown RBP9.96□□□□□ -0.82
SMARCE1P6-201ENST00000398372 ATP7AQ04656 1500 aa9.95□□□□□ -0.82
SMARCE1P6-201ENST00000398372 IQGAP1P46940 1657 aa9.94□□□□□ -0.82
SMARCE1P6-201ENST00000398372 DEPDC5O75140 1603 aa9.94□□□□□ -0.82
SMARCE1P6-201ENST00000398372 INO80Q9ULG1 1556 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1P6-201ENST00000398372 GPATCH8Q9UKJ3 1502 aaKnown RBP9.94□□□□□ -0.82
SMARCE1P6-201ENST00000398372 CCNB3Q8WWL7 1395 aa9.93□□□□□ -0.82
SMARCE1P6-201ENST00000398372 RNF216Q9NWF9 866 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1P6-201ENST00000398372 THEMISQ8N1K5 641 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1P6-201ENST00000398372 CFDP1Q9UEE9 299 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1P6-201ENST00000398372 EHBP1L1Q8N3D4 1523 aa9.92□□□□□ -0.82
SMARCE1P6-201ENST00000398372 SYNMO15061 1565 aa9.91□□□□□ -0.82
SMARCE1P6-201ENST00000398372 UGGT1Q9NYU2 1555 aa9.9□□□□□ -0.82
SMARCE1P6-201ENST00000398372 HRCP23327 699 aa9.9□□□□□ -0.82
SMARCE1P6-201ENST00000398372 FAM135BQ49AJ0 1406 aa9.9□□□□□ -0.83
SMARCE1P6-201ENST00000398372 VPS8Q8N3P4 1428 aa9.9□□□□□ -0.83
SMARCE1P6-201ENST00000398372 MIA2Q96PC5 1412 aa9.9□□□□□ -0.83
SMARCE1P6-201ENST00000398372 ZC3H13Q5T200 1668 aaKnown RBP9.9□□□□□ -0.83
SMARCE1P6-201ENST00000398372 TIAM1Q13009 1591 aa9.89□□□□□ -0.83
SMARCE1P6-201ENST00000398372 TRIM26Q12899 539 aaPredicted RBP9.89□□□□□ -0.83
SMARCE1P6-201ENST00000398372 PZPP20742 1482 aa9.89□□□□□ -0.83
SMARCE1P6-201ENST00000398372 ADGBQ8N7X0 1667 aa9.89□□□□□ -0.83
SMARCE1P6-201ENST00000398372 SRCAPQ6ZRS2 3230 aa9.88□□□□□ -0.83
SMARCE1P6-201ENST00000398372 PLEKHH2Q8IVE3 1493 aa9.88□□□□□ -0.83
SMARCE1P6-201ENST00000398372 TRIM52Q96A61 297 aa9.88□□□□□ -0.83
SMARCE1P6-201ENST00000398372 KIAA1107Q9UPP5 1409 aa9.88□□□□□ -0.83
SMARCE1P6-201ENST00000398372 ZNF644Q9H582 1327 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1P6-201ENST00000398372 ATXN8OSP0DMR3 200 aa9.87□□□□□ -0.83
SMARCE1P6-201ENST00000398372 RBM33Q96EV2 1170 aaKnown RBP9.87□□□□□ -0.83
SMARCE1P6-201ENST00000398372 FAM135AQ9P2D6 1515 aa9.87□□□□□ -0.83
SMARCE1P6-201ENST00000398372 ROBO1Q9Y6N7 1651 aa9.87□□□□□ -0.83
SMARCE1P6-201ENST00000398372 NCOA2Q15596 1464 aa9.86□□□□□ -0.83
SMARCE1P6-201ENST00000398372 KIF3BO15066 747 aa9.86□□□□□ -0.83
SMARCE1P6-201ENST00000398372 NLRP1Q9C000 1473 aa9.85□□□□□ -0.83
SMARCE1P6-201ENST00000398372 LTKP29376 864 aa9.85□□□□□ -0.83
SMARCE1P6-201ENST00000398372 DHX29Q7Z478 1369 aaKnown RBP9.85□□□□□ -0.83
SMARCE1P6-201ENST00000398372 LRRC9Q6ZRR7 1453 aa9.85□□□□□ -0.83
SMARCE1P6-201ENST00000398372 WASHC2CQ9Y4E1 1318 aa9.84□□□□□ -0.83
SMARCE1P6-201ENST00000398372 KDM5DQ9BY66 1539 aa9.84□□□□□ -0.83
SMARCE1P6-201ENST00000398372 PCGF6Q9BYE7 350 aa9.84□□□□□ -0.83
SMARCE1P6-201ENST00000398372 LRP6O75581 1613 aa9.83□□□□□ -0.84
SMARCE1P6-201ENST00000398372 KANK4Q5T7N3 995 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1P6-201ENST00000398372 MBD5Q9P267 1494 aa9.83□□□□□ -0.84
SMARCE1P6-201ENST00000398372 MAP3K1Q13233 1512 aa9.82□□□□□ -0.84
SMARCE1P6-201ENST00000398372 TMEM94Q12767 1356 aa9.82□□□□□ -0.84
SMARCE1P6-201ENST00000398372 PHLPP1O60346 1717 aa9.82□□□□□ -0.84
SMARCE1P6-201ENST00000398372 CAMSAP2Q08AD1 1489 aa9.81□□□□□ -0.84
SMARCE1P6-201ENST00000398372 UBR1Q8IWV7 1749 aa9.81□□□□□ -0.84
SMARCE1P6-201ENST00000398372 CFAP65Q6ZU64 1925 aaKnown RBP9.8□□□□□ -0.84
SMARCE1P6-201ENST00000398372 APLP2Q06481 763 aa9.8□□□□□ -0.84
SMARCE1P6-201ENST00000398372 TXNDC2Q86VQ3 553 aa9.8□□□□□ -0.84
SMARCE1P6-201ENST00000398372 CCDC141Q6ZP82 1450 aa9.79□□□□□ -0.84
SMARCE1P6-201ENST00000398372 SCAF11Q99590 1463 aaKnown RBP9.79□□□□□ -0.84
SMARCE1P6-201ENST00000398372 JCADQ9P266 1359 aa9.79□□□□□ -0.84
SMARCE1P6-201ENST00000398372 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
SMARCE1P6-201ENST00000398372 RTEL1-TNFRSF6BF6WH68 1400 aa9.79□□□□□ -0.84
SMARCE1P6-201ENST00000398372 RXRBP28702 533 aa9.78□□□□□ -0.84
SMARCE1P6-201ENST00000398372 ARHGAP23Q9P227 1491 aa9.78□□□□□ -0.84
SMARCE1P6-201ENST00000398372 ARHGEF5Q12774 1597 aa9.77□□□□□ -0.85
SMARCE1P6-201ENST00000398372 ZNF772Q68DY9 489 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1P6-201ENST00000398372 PROSER2Q86WR7 435 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1P6-201ENST00000398372 SLAIN2Q9P270 581 aa9.77□□□□□ -0.85
SMARCE1P6-201ENST00000398372 COL16A1Q07092 1604 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms